RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 C1orf137Q5JT78 98 aa2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 Q6ZRX8 168 aa2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPTA1P02549 2419 aa2.12□□□□□ -2.07
HMGB3P23-201ENST00000414981 HIVEP3Q5T1R4 2406 aa2.11□□□□□ -2.07
HMGB3P23-201ENST00000414981 A0A1W2PNM2 257 aa2.11□□□□□ -2.07
HMGB3P23-201ENST00000414981 Q5W150 140 aa2.11□□□□□ -2.07
HMGB3P23-201ENST00000414981 KRTAP26-1Q6PEX3 210 aa2.11□□□□□ -2.07
HMGB3P23-201ENST00000414981 CR1P17927 2039 aa2.11□□□□□ -2.07
HMGB3P23-201ENST00000414981 MGAQ8IWI9 3026 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 BSNQ9UPA5 3926 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 TACC2O95359 2948 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 AKAP6Q13023 2319 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 A0A096LPF7 62 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 LINC01556Q5JQF7 62 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 CLPSL2Q6UWE3 100 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 Q8NAQ8 132 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPTSSBQ8NFR3 76 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
HMGB3P23-201ENST00000414981 CSPG4Q6UVK1 2322 aa2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 HRNRQ86YZ3 2850 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 SPENQ96T58 3664 aaKnown RBP2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 Q5VV11 94 aa2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 CASC2Q6XLA1 102 aa2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 WFDC10AQ9H1F0 79 aa2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 TP53AIP1Q9HCN2 124 aa2.09□□□□□ -2.07
HMGB3P23-201ENST00000414981 BDP1A6H8Y1 2624 aa2.09□□□□□ -2.08
HMGB3P23-201ENST00000414981 SMG1Q96Q15 3661 aaKnown RBP2.09□□□□□ -2.08
HMGB3P23-201ENST00000414981 BOD1L1Q8NFC6 3051 aa2.09□□□□□ -2.08
HMGB3P23-201ENST00000414981 A0A087WSZ3 146 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 K7EQZ3 153 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 SPRR1BP22528 89 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 RPL37AP61513 92 aaKnown RBP2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 MOBPQ13875 183 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 C9orf163Q8N9P6 203 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 DCHS2Q6V1P9 2916 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 WNK1Q9H4A3 2382 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 ZNF292O60281 2723 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 GVINP1Q7Z2Y8 2422 aa2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 RIF1Q5UIP0 2472 aaKnown RBP2.08□□□□□ -2.08
HMGB3P23-201ENST00000414981 A0A1B0GU33 70 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 CHKB-CPT1BH3BT56 60 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 LINC00483Q53H64 154 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 C2CD3Q4AC94 2353 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 LRBAP50851 2863 aa2.07□□□□□ -2.08
HMGB3P23-201ENST00000414981 DMDP11532 3685 aa2.06□□□□□ -2.08
HMGB3P23-201ENST00000414981 ZFHX4Q86UP3 3567 aa2.06□□□□□ -2.08
HMGB3P23-201ENST00000414981 LRCOL1A6NCL2 159 aa2.06□□□□□ -2.08
HMGB3P23-201ENST00000414981 H0Y9P7 68 aa2.06□□□□□ -2.08
HMGB3P23-201ENST00000414981 DEFB105AQ8NG35 78 aa2.06□□□□□ -2.08
HMGB3P23-201ENST00000414981 ATMQ13315 3056 aa2.06□□□□□ -2.08
HMGB3P23-201ENST00000414981 CSMD1Q96PZ7 3565 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 DEFB131BA0A096LNP1 70 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 IGLV7-43P04211 117 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 DEFB135Q30KP9 77 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 IGFL1Q6UW32 110 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 ST20-AS1Q8NBB2 130 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 LINC00472Q9H8W2 130 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 DOPEY1Q5JWR5 2465 aa2.05□□□□□ -2.08
HMGB3P23-201ENST00000414981 AKAP13Q12802 2813 aa2.04□□□□□ -2.08
HMGB3P23-201ENST00000414981 NBASA2RRP1 2371 aa2.04□□□□□ -2.08
HMGB3P23-201ENST00000414981 COA5Q86WW8 74 aa2.04□□□□□ -2.08
HMGB3P23-201ENST00000414981 WFDC10BQ8IUB3 73 aa2.04□□□□□ -2.08
HMGB3P23-201ENST00000414981 TTC28Q96AY4 2481 aa2.04□□□□□ -2.08
HMGB3P23-201ENST00000414981 PRR15LQ9BU68 103 aa2.04□□□□□ -2.08
HMGB3P23-201ENST00000414981 CELSR1Q9NYQ6 3014 aa2.03□□□□□ -2.08
HMGB3P23-201ENST00000414981 MUC3AQ02505 3323 aa2.03□□□□□ -2.08
HMGB3P23-201ENST00000414981 CEP295Q9C0D2 2601 aa2.03□□□□□ -2.09
HMGB3P23-201ENST00000414981 DMXL1Q9Y485 3027 aa2.02□□□□□ -2.09
HMGB3P23-201ENST00000414981 ZFHX2Q9C0A1 2572 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P23-201ENST00000414981 MMP24-AS1A0A0U1RRL7 71 aa2.02□□□□□ -2.09
HMGB3P23-201ENST00000414981 HTN3P15516 51 aa2.02□□□□□ -2.09
HMGB3P23-201ENST00000414981 WFDC13Q8IUB5 93 aa2.02□□□□□ -2.09
HMGB3P23-201ENST00000414981 DEFB4AO15263 64 aa2.01□□□□□ -2.09
HMGB3P23-201ENST00000414981 CSAG1Q6PB30 78 aa2.01□□□□□ -2.09
HMGB3P23-201ENST00000414981 MUC6Q6W4X9 2439 aa2.01□□□□□ -2.09
HMGB3P23-201ENST00000414981 SPG11Q96JI7 2443 aa2.01□□□□□ -2.09
HMGB3P23-201ENST00000414981 ASH1LQ9NR48 2969 aaKnown RBP2□□□□□ -2.09
HMGB3P23-201ENST00000414981 IGKV2-24A0A0C4DH68 120 aa2□□□□□ -2.09
HMGB3P23-201ENST00000414981 ACYP2P14621 99 aa2□□□□□ -2.09
HMGB3P23-201ENST00000414981 ASPMQ8IZT6 3477 aa2□□□□□ -2.09
HMGB3P23-201ENST00000414981 USP9YO00507 2555 aaPredicted RBP2□□□□□ -2.09
HMGB3P23-201ENST00000414981 USP9XQ93008 2570 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P23-201ENST00000414981 MRPL34Q9BQ48 92 aaKnown RBP1.99□□□□□ -2.09
HMGB3P23-201ENST00000414981 MYO9AB2RTY4 2548 aa1.99□□□□□ -2.09
HMGB3P23-201ENST00000414981 TLN2Q9Y4G6 2542 aa1.99□□□□□ -2.09
HMGB3P23-201ENST00000414981 ANKRD17O75179 2603 aaKnown RBP1.98□□□□□ -2.09
HMGB3P23-201ENST00000414981 MAP1AP78559 2803 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P23-201ENST00000414981 HRES1P13985 223 aa1.98□□□□□ -2.09
HMGB3P23-201ENST00000414981 SPATA8Q6RVD6 105 aa1.98□□□□□ -2.09
HMGB3P23-201ENST00000414981 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
HMGB3P23-201ENST00000414981 HIVEP2P31629 2446 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 PRB1P04280 392 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms