RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 M0R2T5 61 aa12.91□□□□□ -0.34
AC005540.1-201ENST00000413911 COX8AP10176 69 aa12.9□□□□□ -0.34
AC005540.1-201ENST00000413911 DLEU1O43261 78 aa12.88□□□□□ -0.35
AC005540.1-201ENST00000413911 TRAV13-2A0A0B4J235 113 aa12.86□□□□□ -0.35
AC005540.1-201ENST00000413911 COX6B2Q6YFQ2 88 aa12.86□□□□□ -0.35
AC005540.1-201ENST00000413911 A4D1N5 150 aa12.83□□□□□ -0.36
AC005540.1-201ENST00000413911 SMIM11BQ8TCY0 68 aa12.83□□□□□ -0.36
AC005540.1-201ENST00000413911 PAM16Q9Y3D7 125 aa12.8□□□□□ -0.36
AC005540.1-201ENST00000413911 SPATA45Q537H7 98 aa12.79□□□□□ -0.36
AC005540.1-201ENST00000413911 C14orf144Q96I85 54 aa12.79□□□□□ -0.36
AC005540.1-201ENST00000413911 VAMP8Q9BV40 100 aa12.77□□□□□ -0.37
AC005540.1-201ENST00000413911 TCL1BO95988 128 aa12.76□□□□□ -0.37
AC005540.1-201ENST00000413911 HIST1H4GQ99525 98 aa12.76□□□□□ -0.37
AC005540.1-201ENST00000413911 NHP2Q9NX24 153 aaKnown RBP12.76□□□□□ -0.37
AC005540.1-201ENST00000413911 HIGD1BQ9P298 99 aa12.76□□□□□ -0.37
AC005540.1-201ENST00000413911 C2orf91Q6ZV80 131 aa12.74□□□□□ -0.37
AC005540.1-201ENST00000413911 PYY3Q5JQD4 70 aa12.73□□□□□ -0.37
AC005540.1-201ENST00000413911 LINC00575Q6W349 94 aa12.7□□□□□ -0.38
AC005540.1-201ENST00000413911 C12orf57Q99622 126 aa12.68□□□□□ -0.38
AC005540.1-201ENST00000413911 TMA7Q9Y2S6 64 aaKnown RBP12.68□□□□□ -0.38
AC005540.1-201ENST00000413911 Q6ZQY7 126 aa12.67□□□□□ -0.38
AC005540.1-201ENST00000413911 F8WEM9 126 aa12.66□□□□□ -0.38
AC005540.1-201ENST00000413911 CFC1P0CG37 223 aa12.66□□□□□ -0.38
AC005540.1-201ENST00000413911 VAMP3Q15836 100 aa12.66□□□□□ -0.38
AC005540.1-201ENST00000413911 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
AC005540.1-201ENST00000413911 IGFL1Q6UW32 110 aa12.64□□□□□ -0.39
AC005540.1-201ENST00000413911 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
AC005540.1-201ENST00000413911 Q6Q795 121 aa12.63□□□□□ -0.39
AC005540.1-201ENST00000413911 hADV29S1A0JD25 119 aa12.62□□□□□ -0.39
AC005540.1-201ENST00000413911 A0A0B4J2C4 111 aa12.61□□□□□ -0.39
AC005540.1-201ENST00000413911 Q75L30 129 aa12.61□□□□□ -0.39
AC005540.1-201ENST00000413911 Q6JHZ5 121 aa12.6□□□□□ -0.39
AC005540.1-201ENST00000413911 CEND1Q8N111 149 aa12.6□□□□□ -0.39
AC005540.1-201ENST00000413911 CLEC2BQ92478 149 aa12.6□□□□□ -0.39
AC005540.1-201ENST00000413911 ATP11AUNQ6ZP68 121 aa12.58□□□□□ -0.4
AC005540.1-201ENST00000413911 OCIAD2Q56VL3 154 aa12.57□□□□□ -0.4
AC005540.1-201ENST00000413911 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
AC005540.1-201ENST00000413911 SSPOA2VEC9 5147 aa12.56□□□□□ -0.4
AC005540.1-201ENST00000413911 USH2AO75445 5202 aa12.56□□□□□ -0.4
AC005540.1-201ENST00000413911 RAB37Q96AX2 223 aa12.55□□□□□ -0.4
AC005540.1-201ENST00000413911 FXYD2P54710 66 aa12.54□□□□□ -0.4
AC005540.1-201ENST00000413911 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
AC005540.1-201ENST00000413911 KRTAP9-8Q9BYQ0 159 aa12.53□□□□□ -0.4
AC005540.1-201ENST00000413911 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
AC005540.1-201ENST00000413911 A6NJY4 79 aa12.5□□□□□ -0.41
AC005540.1-201ENST00000413911 H3BUT2 72 aa12.49□□□□□ -0.41
AC005540.1-201ENST00000413911 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.48□□□□□ -0.41
AC005540.1-201ENST00000413911 HSD52Q0P140 79 aa12.48□□□□□ -0.41
AC005540.1-201ENST00000413911 Q96NJ1 140 aa12.48□□□□□ -0.41
AC005540.1-201ENST00000413911 PRO1854Q9UHT4 67 aa12.48□□□□□ -0.41
AC005540.1-201ENST00000413911 SNHG12Q9BXW3 62 aa12.47□□□□□ -0.41
AC005540.1-201ENST00000413911 H0YGX0 51 aa12.46□□□□□ -0.41
AC005540.1-201ENST00000413911 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.41
AC005540.1-201ENST00000413911 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.41
AC005540.1-201ENST00000413911 LST1O00453 97 aa12.45□□□□□ -0.42
AC005540.1-201ENST00000413911 FAM218AQ96MZ4 157 aa12.45□□□□□ -0.42
AC005540.1-201ENST00000413911 KRTAP9-7A8MTY7 169 aa12.43□□□□□ -0.42
AC005540.1-201ENST00000413911 C20orf166-AS1Q96NR2 134 aa12.43□□□□□ -0.42
AC005540.1-201ENST00000413911 A8MUU9 505 aa12.4□□□□□ -0.42
AC005540.1-201ENST00000413911 A0A1B0GX51 115 aa12.38□□□□□ -0.43
AC005540.1-201ENST00000413911 TRIAP1O43715 76 aa12.38□□□□□ -0.43
AC005540.1-201ENST00000413911 K7ERJ3 54 aa12.36□□□□□ -0.43
AC005540.1-201ENST00000413911 SNCGO76070 127 aa12.34□□□□□ -0.43
AC005540.1-201ENST00000413911 NDUFV3P56181 108 aaKnown RBP12.31□□□□□ -0.44
AC005540.1-201ENST00000413911 SS18L2Q9UHA2 77 aa12.31□□□□□ -0.44
AC005540.1-201ENST00000413911 FCGBPQ9Y6R7 5405 aaPredicted RBP12.29□□□□□ -0.44
AC005540.1-201ENST00000413911 KRTAP16-1A8MUX0 517 aa12.29□□□□□ -0.44
AC005540.1-201ENST00000413911 MT2AP02795 61 aa12.29□□□□□ -0.44
AC005540.1-201ENST00000413911 TEN1Q86WV5 123 aa12.29□□□□□ -0.44
AC005540.1-201ENST00000413911 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.45
AC005540.1-201ENST00000413911 A0A087WSZ3 146 aa12.27□□□□□ -0.45
AC005540.1-201ENST00000413911 SMIM6P0DI80 62 aa12.27□□□□□ -0.45
AC005540.1-201ENST00000413911 DSCR10P59022 87 aa12.27□□□□□ -0.45
AC005540.1-201ENST00000413911 H3BMG7 143 aa12.23□□□□□ -0.45
AC005540.1-201ENST00000413911 GHRHP01286 108 aa12.23□□□□□ -0.45
AC005540.1-201ENST00000413911 PSMB2P49721 201 aa12.23□□□□□ -0.45
AC005540.1-201ENST00000413911 LCE2BO14633 110 aa12.21□□□□□ -0.45
AC005540.1-201ENST00000413911 COX6CP09669 75 aa12.21□□□□□ -0.45
AC005540.1-201ENST00000413911 MT1FP04733 61 aa12.2□□□□□ -0.46
AC005540.1-201ENST00000413911 FABP2P12104 132 aa12.2□□□□□ -0.46
AC005540.1-201ENST00000413911 A0A1W2PNM2 257 aa12.18□□□□□ -0.46
AC005540.1-201ENST00000413911 LOC105371267A0A1B0GV96 52 aa12.16□□□□□ -0.46
AC005540.1-201ENST00000413911 ORMDL1Q9P0S3 153 aa12.16□□□□□ -0.46
AC005540.1-201ENST00000413911 H3BQ85 93 aa12.15□□□□□ -0.46
AC005540.1-201ENST00000413911 DNAL4O96015 105 aa12.15□□□□□ -0.46
AC005540.1-201ENST00000413911 KRTAP19-1Q8IUB9 90 aa12.15□□□□□ -0.46
AC005540.1-201ENST00000413911 MPLKIPQ8TAP9 179 aa12.15□□□□□ -0.46
AC005540.1-201ENST00000413911 KRTAP9-3Q9BYQ3 159 aa12.14□□□□□ -0.47
AC005540.1-201ENST00000413911 M0R143 59 aa12.13□□□□□ -0.47
AC005540.1-201ENST00000413911 TRACP01848 142 aa12.13□□□□□ -0.47
AC005540.1-201ENST00000413911 HRES1P13985 223 aa12.13□□□□□ -0.47
AC005540.1-201ENST00000413911 SIGMAR1Q99720 223 aa12.13□□□□□ -0.47
AC005540.1-201ENST00000413911 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
AC005540.1-201ENST00000413911 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
AC005540.1-201ENST00000413911 NOTCH2NLQ7Z3S9 236 aa12.12□□□□□ -0.47
AC005540.1-201ENST00000413911 TMEM256-PLSCR3K7ERE1 68 aa12.1□□□□□ -0.47
AC005540.1-201ENST00000413911 LINC00313P59037 77 aa12.1□□□□□ -0.47
AC005540.1-201ENST00000413911 A0A1B0GV72 72 aa12.09□□□□□ -0.47
AC005540.1-201ENST00000413911 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
AC005540.1-201ENST00000413911 UBE2V1Q13404 147 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms