RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
LINC00396-201ENST00000411690 Q8N377 158 aa3.4□□□□□ -1.87
LINC00396-201ENST00000411690 RAB37Q96AX2 223 aa3.4□□□□□ -1.87
LINC00396-201ENST00000411690 AMELXQ99217 191 aa3.4□□□□□ -1.87
LINC00396-201ENST00000411690 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.87
LINC00396-201ENST00000411690 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 H3BMG7 143 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 LEPROTO15243 131 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 SLC25A20O43772 301 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 SPINK8P0C7L1 97 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 SCGB1D4Q6XE38 83 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 FAM19A1Q7Z5A9 133 aa3.39□□□□□ -1.87
LINC00396-201ENST00000411690 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
LINC00396-201ENST00000411690 IGKV2D-30A0A075B6S6 120 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 A0A0B4J2C4 111 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 PFN2P35080 140 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
LINC00396-201ENST00000411690 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
LINC00396-201ENST00000411690 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 SIGMAR1Q99720 223 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 PRO0461Q9UI25 63 aa3.38□□□□□ -1.87
LINC00396-201ENST00000411690 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 A0A0J9YXY3 114 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 J3QQQ9 107 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 TIMM17BO60830 172 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 LGALS3P17931 250 aaKnown RBP3.37□□□□□ -1.87
LINC00396-201ENST00000411690 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 MTURNQ8N3F0 131 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
LINC00396-201ENST00000411690 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 K7ERJ3 54 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 IFITM1P13164 125 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 TMEM170BQ5T4T1 132 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 Q6Q795 121 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 PPDPFLQ8WWR9 84 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 COPS9Q8WXC6 57 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
LINC00396-201ENST00000411690 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 SPANXDQ9BXN6 97 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 SPANXCQ9NY87 97 aa3.36□□□□□ -1.87
LINC00396-201ENST00000411690 ZNF22P17026 224 aaPredicted RBP3.35□□□□□ -1.87
LINC00396-201ENST00000411690 LINC00158P58513 81 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 TEN1Q86WV5 123 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 ZNF625Q96I27 306 aaPredicted RBP3.35□□□□□ -1.87
LINC00396-201ENST00000411690 TMEM126AQ9H061 195 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 ERG28Q9UKR5 140 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 NEBP20929 6669 aa3.35□□□□□ -1.87
LINC00396-201ENST00000411690 IGLV5-37A0A075B6J1 123 aa3.34□□□□□ -1.87
LINC00396-201ENST00000411690 IGLV5-45A0A087WSX0 123 aa3.34□□□□□ -1.87
LINC00396-201ENST00000411690 A0A1B0GV72 72 aa3.34□□□□□ -1.87
LINC00396-201ENST00000411690 ETDBQ3ZM63 59 aa3.34□□□□□ -1.87
LINC00396-201ENST00000411690 MEIG1Q5JSS6 88 aa3.34□□□□□ -1.87
LINC00396-201ENST00000411690 ZNF706Q9Y5V0 76 aaPredicted RBP3.34□□□□□ -1.87
LINC00396-201ENST00000411690 LOC107984156A0A0G2JMH3 177 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 A0A0U1RRA0 63 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 COX6CP09669 75 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 SCGB1C2P0DMR2 95 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 PSMB2P49721 201 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 TSPEAR-AS2P59090 65 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 COX17Q14061 63 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 ARL17AQ8IVW1 177 aa3.33□□□□□ -1.88
LINC00396-201ENST00000411690 ETDCA0A1B0GVM5 59 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 A4D1N5 150 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 H3BT86 120 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 M0R378 163 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 TCL1BO95988 128 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 ATXN8Q156A1 80 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 LITAFQ99732 161 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
LINC00396-201ENST00000411690 IGLV5-39A0A0G2JS06 123 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 TRBV10-2A0A0K0K1G8 114 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 FAM240AA0A1B0GVK7 77 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 MT2AP02795 61 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 HERV-K104P63124 156 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 MOBPQ13875 183 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 MUSTN1Q8IVN3 82 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 ANKRD29Q8N6D5 301 aa3.31□□□□□ -1.88
LINC00396-201ENST00000411690 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
LINC00396-201ENST00000411690 IGLV9-49A0A0B4J1Y8 123 aa3.3□□□□□ -1.88
LINC00396-201ENST00000411690 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
LINC00396-201ENST00000411690 VPREB1P12018 145 aa3.3□□□□□ -1.88
LINC00396-201ENST00000411690 NCR3O14931 201 aa3.29□□□□□ -1.88
LINC00396-201ENST00000411690 MT1FP04733 61 aa3.29□□□□□ -1.88
LINC00396-201ENST00000411690 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
LINC00396-201ENST00000411690 C9JAW5 83 aa3.28□□□□□ -1.88
LINC00396-201ENST00000411690 LST1O00453 97 aa3.28□□□□□ -1.88
LINC00396-201ENST00000411690 PRYO14603 147 aa3.28□□□□□ -1.88
LINC00396-201ENST00000411690 ACYP1P07311 99 aa3.28□□□□□ -1.88
LINC00396-201ENST00000411690 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
LINC00396-201ENST00000411690 Q1RN00 199 aa3.28□□□□□ -1.88
LINC00396-201ENST00000411690 S100A7L2Q5SY68 101 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms