RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 MYL12AP19105 171 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 SPCS3P61009 180 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 VAMP3Q15836 100 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 TMEM95Q3KNT9 176 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 CROCCP2Q86T23 111 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 CCDC170Q8IYT3 715 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 NRGNQ92686 78 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 SMIM19Q96E16 107 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 C2orf88Q9BSF0 95 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 BOLA2Q9H3K6 86 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 CENPHQ9H3R5 247 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 KCNQ1DNQ9H478 68 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 MANBALQ9NQG1 85 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 ABCC2Q92887 1545 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 F8WDY8 70 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 DBIP07108 87 aaKnown RBP-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 LINC00032P0C843 101 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 UBL5Q9BZL1 73 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 NMES1Q9C002 83 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 C1orf109Q9NX04 203 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 GSKIPQ9P0R6 139 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 PRO1854Q9UHT4 67 aa-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 FAM32AQ9Y421 112 aaKnown RBP-3.22□□□□□ -2.92
RNU4-88P-201ENST00000411220 PEG3Q9GZU2 1588 aa-3.22□□□□□ -2.93
RNU4-88P-201ENST00000411220 ABCC6O95255 1503 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 SYCE3A1L190 88 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 GABARAPH6UMI1 98 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 Q0VG73 95 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 CCDC152Q4G0S7 254 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 ETFRF1Q6IPR1 90 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 MNS1Q8NEH6 495 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 C1orf54Q8WWF1 131 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 PTH2Q96A98 100 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 DPY30Q9C005 99 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 CBLN4Q9NTU7 201 aa-3.23□□□□□ -2.93
RNU4-88P-201ENST00000411220 EPRSP07814 1512 aaKnown RBP-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 DDX60Q8IY21 1712 aaKnown RBP-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 TIAM1Q13009 1591 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 F6UZH7 168 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 MPC2O95563 127 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 APOA2P02652 100 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 RPL22P35268 128 aaKnown RBP-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 RBP2P50120 134 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 TNNC1P63316 161 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 HMGN5P82970 282 aaKnown RBP-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 SCGB2A2Q13296 93 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 SCGB2B2Q4G0G5 96 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 FAM228AQ86W67 206 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 OR13C6PQ8NH95 151 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 ATPIF1Q9UII2 106 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 ABCC3O15438 1527 aa-3.24□□□□□ -2.93
RNU4-88P-201ENST00000411220 RIIAD1A6NNX1 92 aa-3.25□□□□□ -2.93
RNU4-88P-201ENST00000411220 RPS12P25398 132 aaKnown RBP-3.25□□□□□ -2.93
RNU4-88P-201ENST00000411220 DNM1P34Q6PK57 102 aa-3.25□□□□□ -2.93
RNU4-88P-201ENST00000411220 A2MP01023 1474 aa-3.25□□□□□ -2.93
RNU4-88P-201ENST00000411220 ETDCA0A1B0GVM5 59 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 A0A1W2PRE2 83 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 H3BUT2 72 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 GOSR1O95249 250 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 CYB5AP00167 134 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 TNNC2P02585 160 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 LSMEM1Q8N8F7 131 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 PDCD10Q9BUL8 212 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 HSPB11Q9Y547 144 aa-3.26□□□□□ -2.93
RNU4-88P-201ENST00000411220 FTCDNL1E5RQL4 147 aa-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 G3V2T6 193 aa-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 PDE6DO43924 150 aa-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 SMIM24O75264 130 aa-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 GUCA1AP43080 201 aaPredicted RBP-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 SAR1AQ9NR31 198 aa-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 ARL2BPQ9Y2Y0 163 aa-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 LSM5Q9Y4Y9 91 aaKnown RBP-3.27□□□□□ -2.93
RNU4-88P-201ENST00000411220 MYO3AQ8NEV4 1616 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 TNFAIP8O95379 198 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 SARNPP82979 210 aaKnown RBP-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 HMGN3Q15651 99 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 PMCHL1Q16048 86 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 C12orf73Q69YU5 71 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 DYDC1Q8WWB3 177 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 SPANXDQ9BXN6 97 aa-3.28□□□□□ -2.93
RNU4-88P-201ENST00000411220 CFAP74Q9C0B2 1584 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 WRBO00258 174 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 APELAP0DMC3 54 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 PPP1R2P41236 205 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 PLGLAQ15195 96 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 TOMM20Q15388 145 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 PRAP1Q96NZ9 151 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 CGREF1Q99674 301 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 PAIP2Q9BPZ3 127 aaKnown RBP-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 BANF2Q9H503 90 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 GUCA1BQ9UMX6 200 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 NAIPQ13075 1403 aa-3.29□□□□□ -2.94
RNU4-88P-201ENST00000411220 TRAV36DV7A0A075B6V5 113 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 GYPAP02724 150 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 HTN3P15516 51 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 S100A11P31949 105 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 GNG11P61952 73 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 TFF3Q07654 80 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 CCDC122Q5T0U0 273 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 CACFD1Q9UGQ2 172 aa-3.3□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms