RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 Q96NJ1 140 aa5.88□□□□□ -1.47
SPTLC1P3-201ENST00000403408 TRBV7-6A0A0J9YX20 115 aa5.87□□□□□ -1.47
SPTLC1P3-201ENST00000403408 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
SPTLC1P3-201ENST00000403408 LEPROTL1O95214 131 aa5.87□□□□□ -1.47
SPTLC1P3-201ENST00000403408 LINC00518Q8N0U6 118 aa5.87□□□□□ -1.47
SPTLC1P3-201ENST00000403408 MPLKIPQ8TAP9 179 aa5.87□□□□□ -1.47
SPTLC1P3-201ENST00000403408 TTTY13Q9BZ97 58 aa5.87□□□□□ -1.47
SPTLC1P3-201ENST00000403408 TRBV7-7A0A0K0K1E9 115 aa5.86□□□□□ -1.47
SPTLC1P3-201ENST00000403408 A0A1B0GWB2 263 aa5.85□□□□□ -1.47
SPTLC1P3-201ENST00000403408 H3BS24 57 aa5.85□□□□□ -1.47
SPTLC1P3-201ENST00000403408 TIMM17BO60830 172 aa5.85□□□□□ -1.47
SPTLC1P3-201ENST00000403408 SERF1AO75920 110 aa5.85□□□□□ -1.47
SPTLC1P3-201ENST00000403408 FABP4P15090 132 aa5.85□□□□□ -1.47
SPTLC1P3-201ENST00000403408 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
SPTLC1P3-201ENST00000403408 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
SPTLC1P3-201ENST00000403408 HRES1P13985 223 aa5.83□□□□□ -1.48
SPTLC1P3-201ENST00000403408 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
SPTLC1P3-201ENST00000403408 CLEC2BQ92478 149 aa5.8□□□□□ -1.48
SPTLC1P3-201ENST00000403408 LINC00846Q9NV44 126 aa5.8□□□□□ -1.48
SPTLC1P3-201ENST00000403408 FAM236DA0A1B0GTK5 79 aa5.79□□□□□ -1.48
SPTLC1P3-201ENST00000403408 APOC3P02656 99 aa5.79□□□□□ -1.48
SPTLC1P3-201ENST00000403408 FAM236CP0DP71 79 aa5.79□□□□□ -1.48
SPTLC1P3-201ENST00000403408 HSPB8Q9UJY1 196 aa5.79□□□□□ -1.48
SPTLC1P3-201ENST00000403408 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
SPTLC1P3-201ENST00000403408 TRGC2P03986 189 aa5.78□□□□□ -1.48
SPTLC1P3-201ENST00000403408 SMIM11BQ8TCY0 68 aa5.78□□□□□ -1.48
SPTLC1P3-201ENST00000403408 Q6JHZ5 121 aa5.77□□□□□ -1.49
SPTLC1P3-201ENST00000403408 A6NDN8 102 aa5.76□□□□□ -1.49
SPTLC1P3-201ENST00000403408 F8WEM9 126 aa5.76□□□□□ -1.49
SPTLC1P3-201ENST00000403408 LST1O00453 97 aa5.76□□□□□ -1.49
SPTLC1P3-201ENST00000403408 DSCR10P59022 87 aa5.76□□□□□ -1.49
SPTLC1P3-201ENST00000403408 OCIAD2Q56VL3 154 aa5.76□□□□□ -1.49
SPTLC1P3-201ENST00000403408 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
SPTLC1P3-201ENST00000403408 A4D1N5 150 aa5.74□□□□□ -1.49
SPTLC1P3-201ENST00000403408 LINC00575Q6W349 94 aa5.74□□□□□ -1.49
SPTLC1P3-201ENST00000403408 Q6ZQY7 126 aa5.74□□□□□ -1.49
SPTLC1P3-201ENST00000403408 H3BUT2 72 aa5.73□□□□□ -1.49
SPTLC1P3-201ENST00000403408 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
SPTLC1P3-201ENST00000403408 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
SPTLC1P3-201ENST00000403408 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
SPTLC1P3-201ENST00000403408 SNAPINO95295 136 aa5.72□□□□□ -1.49
SPTLC1P3-201ENST00000403408 NHP2Q9NX24 153 aaKnown RBP5.72□□□□□ -1.49
SPTLC1P3-201ENST00000403408 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
SPTLC1P3-201ENST00000403408 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
SPTLC1P3-201ENST00000403408 LINC01545Q5VT33 79 aa5.71□□□□□ -1.5
SPTLC1P3-201ENST00000403408 SLC7A5P1Q8MH63 180 aa5.71□□□□□ -1.5
SPTLC1P3-201ENST00000403408 SVBPQ8N300 66 aa5.71□□□□□ -1.5
SPTLC1P3-201ENST00000403408 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
SPTLC1P3-201ENST00000403408 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
SPTLC1P3-201ENST00000403408 KMT2DO14686 5537 aa5.68□□□□□ -1.5
SPTLC1P3-201ENST00000403408 hADV29S1A0JD25 119 aa5.68□□□□□ -1.5
SPTLC1P3-201ENST00000403408 IFITM1P13164 125 aa5.68□□□□□ -1.5
SPTLC1P3-201ENST00000403408 ANKRD39Q53RE8 183 aa5.67□□□□□ -1.5
SPTLC1P3-201ENST00000403408 SCGB1D4Q6XE38 83 aa5.66□□□□□ -1.5
SPTLC1P3-201ENST00000403408 A0A087WSZ3 146 aa5.63□□□□□ -1.51
SPTLC1P3-201ENST00000403408 PET117Q6UWS5 81 aa5.63□□□□□ -1.51
SPTLC1P3-201ENST00000403408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
SPTLC1P3-201ENST00000403408 COLCA2A8K830 154 aa5.62□□□□□ -1.51
SPTLC1P3-201ENST00000403408 NDUFA5Q16718 116 aa5.62□□□□□ -1.51
SPTLC1P3-201ENST00000403408 Q6ZVH6 145 aa5.62□□□□□ -1.51
SPTLC1P3-201ENST00000403408 SS18L2Q9UHA2 77 aa5.62□□□□□ -1.51
SPTLC1P3-201ENST00000403408 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
SPTLC1P3-201ENST00000403408 LINC00313P59037 77 aa5.61□□□□□ -1.51
SPTLC1P3-201ENST00000403408 VAMP3Q15836 100 aa5.61□□□□□ -1.51
SPTLC1P3-201ENST00000403408 COPS9Q8WXC6 57 aa5.6□□□□□ -1.51
SPTLC1P3-201ENST00000403408 SNHG12Q9BXW3 62 aa5.6□□□□□ -1.51
SPTLC1P3-201ENST00000403408 A8MWP4 228 aa5.59□□□□□ -1.51
SPTLC1P3-201ENST00000403408 TEN1Q86WV5 123 aa5.59□□□□□ -1.51
SPTLC1P3-201ENST00000403408 PPDPFLQ8WWR9 84 aa5.58□□□□□ -1.52
SPTLC1P3-201ENST00000403408 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
SPTLC1P3-201ENST00000403408 A0A1W2PNM2 257 aa5.57□□□□□ -1.52
SPTLC1P3-201ENST00000403408 ATOH7Q8N100 152 aa5.57□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
SPTLC1P3-201ENST00000403408 SCGB1D1O95968 90 aa5.55□□□□□ -1.52
SPTLC1P3-201ENST00000403408 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
SPTLC1P3-201ENST00000403408 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
SPTLC1P3-201ENST00000403408 KRTAP5-9P26371 169 aa5.53□□□□□ -1.52
SPTLC1P3-201ENST00000403408 NDUFV3P56181 108 aaKnown RBP5.53□□□□□ -1.52
SPTLC1P3-201ENST00000403408 SPINK7P58062 85 aa5.53□□□□□ -1.52
SPTLC1P3-201ENST00000403408 KRTDAPP60985 99 aa5.53□□□□□ -1.52
SPTLC1P3-201ENST00000403408 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
SPTLC1P3-201ENST00000403408 MTURNQ8N3F0 131 aa5.51□□□□□ -1.53
SPTLC1P3-201ENST00000403408 C12orf57Q99622 126 aa5.51□□□□□ -1.53
SPTLC1P3-201ENST00000403408 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
SPTLC1P3-201ENST00000403408 IGHV6-1A0A0B4J1U7 121 aa5.49□□□□□ -1.53
SPTLC1P3-201ENST00000403408 MT1BP07438 61 aa5.49□□□□□ -1.53
SPTLC1P3-201ENST00000403408 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
SPTLC1P3-201ENST00000403408 A6NN06 94 aa5.48□□□□□ -1.53
SPTLC1P3-201ENST00000403408 H3BMG7 143 aa5.48□□□□□ -1.53
SPTLC1P3-201ENST00000403408 BVES-AS1Q5T3Y7 98 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms