RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 STAB1Q9NY15 2570 aa12.25□□□□□ -0.45
TNFSF11-203ENST00000398795 hDV103S1A0JD37 113 aa12.24□□□□□ -0.45
TNFSF11-203ENST00000398795 DEFB116Q30KQ4 102 aa12.23□□□□□ -0.45
TNFSF11-203ENST00000398795 UBE2DNLQ8IWF7 75 aa12.23□□□□□ -0.45
TNFSF11-203ENST00000398795 PHF5AQ7RTV0 110 aaKnown RBP12.23□□□□□ -0.45
TNFSF11-203ENST00000398795 PKIGQ9Y2B9 76 aa12.23□□□□□ -0.45
TNFSF11-203ENST00000398795 MAST4O15021 2626 aa12.22□□□□□ -0.45
TNFSF11-203ENST00000398795 KRTAP11-1Q8IUC1 163 aa12.22□□□□□ -0.45
TNFSF11-203ENST00000398795 APLNQ9ULZ1 77 aa12.22□□□□□ -0.45
TNFSF11-203ENST00000398795 KRTAP29-1A8MX34 341 aaPredicted RBP12.21□□□□□ -0.45
TNFSF11-203ENST00000398795 NDUFB1O75438 58 aa12.21□□□□□ -0.45
TNFSF11-203ENST00000398795 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
TNFSF11-203ENST00000398795 CHTF8P0CG12 524 aa12.2□□□□□ -0.46
TNFSF11-203ENST00000398795 MPLKIPQ8TAP9 179 aa12.19□□□□□ -0.46
TNFSF11-203ENST00000398795 CYP4F30PQ9H0H9 118 aa12.19□□□□□ -0.46
TNFSF11-203ENST00000398795 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
TNFSF11-203ENST00000398795 MP68P56378 58 aa12.18□□□□□ -0.46
TNFSF11-203ENST00000398795 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
TNFSF11-203ENST00000398795 PRR15Q8IV56 129 aa12.17□□□□□ -0.46
TNFSF11-203ENST00000398795 RPL37AP61513 92 aaKnown RBP12.16□□□□□ -0.46
TNFSF11-203ENST00000398795 LINC00472Q9H8W2 130 aa12.16□□□□□ -0.46
TNFSF11-203ENST00000398795 NOTCH1P46531 2555 aa12.16□□□□□ -0.46
TNFSF11-203ENST00000398795 A8MWP4 228 aa12.15□□□□□ -0.46
TNFSF11-203ENST00000398795 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
TNFSF11-203ENST00000398795 CASC2Q6XLA1 102 aa12.13□□□□□ -0.47
TNFSF11-203ENST00000398795 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
TNFSF11-203ENST00000398795 H3BPC8 53 aa12.13□□□□□ -0.47
TNFSF11-203ENST00000398795 TRAV22A0A0B4J277 110 aa12.12□□□□□ -0.47
TNFSF11-203ENST00000398795 BAHCC1Q9P281 2608 aa12.1□□□□□ -0.47
TNFSF11-203ENST00000398795 KRTAP13-1Q8IUC0 172 aa12.1□□□□□ -0.47
TNFSF11-203ENST00000398795 Q1T7F1 81 aa12.09□□□□□ -0.47
TNFSF11-203ENST00000398795 LINC00208Q96KT6 92 aa12.08□□□□□ -0.48
TNFSF11-203ENST00000398795 BRK1Q8WUW1 75 aa12.06□□□□□ -0.48
TNFSF11-203ENST00000398795 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
TNFSF11-203ENST00000398795 H0Y9P7 68 aa12.06□□□□□ -0.48
TNFSF11-203ENST00000398795 SPANXA2-OT1Q8N9U9 137 aa12.05□□□□□ -0.48
TNFSF11-203ENST00000398795 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
TNFSF11-203ENST00000398795 Q6ZRN7 208 aaPredicted RBP12.03□□□□□ -0.48
TNFSF11-203ENST00000398795 PANO1I0J062 215 aa12.02□□□□□ -0.49
TNFSF11-203ENST00000398795 PRR4Q16378 134 aa12.02□□□□□ -0.49
TNFSF11-203ENST00000398795 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
TNFSF11-203ENST00000398795 MMP24-AS1A0A0U1RRL7 71 aa12□□□□□ -0.49
TNFSF11-203ENST00000398795 DNAH9Q9NYC9 4486 aa11.99□□□□□ -0.49
TNFSF11-203ENST00000398795 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
TNFSF11-203ENST00000398795 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
TNFSF11-203ENST00000398795 MDFIQ99750 246 aa11.96□□□□□ -0.49
TNFSF11-203ENST00000398795 LINC00483Q53H64 154 aa11.96□□□□□ -0.5
TNFSF11-203ENST00000398795 Q96NJ1 140 aa11.94□□□□□ -0.5
TNFSF11-203ENST00000398795 COL6A5A8TX70 2615 aa11.94□□□□□ -0.5
TNFSF11-203ENST00000398795 ASB16-AS1Q495Z4 193 aa11.94□□□□□ -0.5
TNFSF11-203ENST00000398795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
TNFSF11-203ENST00000398795 V9GYY9 64 aa11.94□□□□□ -0.5
TNFSF11-203ENST00000398795 LYSTQ99698 3801 aa11.93□□□□□ -0.5
TNFSF11-203ENST00000398795 DYNC2H1Q8NCM8 4307 aaKnown RBP11.93□□□□□ -0.5
TNFSF11-203ENST00000398795 MOBPQ13875 183 aa11.92□□□□□ -0.5
TNFSF11-203ENST00000398795 STAB2Q8WWQ8 2551 aa11.91□□□□□ -0.5
TNFSF11-203ENST00000398795 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
TNFSF11-203ENST00000398795 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
TNFSF11-203ENST00000398795 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
TNFSF11-203ENST00000398795 MGAM2Q2M2H8 2515 aa11.86□□□□□ -0.51
TNFSF11-203ENST00000398795 A0A087WTM6 91 aa11.85□□□□□ -0.51
TNFSF11-203ENST00000398795 PSPHP1O15172 72 aa11.85□□□□□ -0.51
TNFSF11-203ENST00000398795 C8orf17Q9NRJ1 99 aa11.85□□□□□ -0.51
TNFSF11-203ENST00000398795 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
TNFSF11-203ENST00000398795 IGLV7-46A0A075B6I9 117 aa11.83□□□□□ -0.52
TNFSF11-203ENST00000398795 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
TNFSF11-203ENST00000398795 C1orf195Q5TG92 126 aa11.81□□□□□ -0.52
TNFSF11-203ENST00000398795 Q6ZR54 194 aa11.81□□□□□ -0.52
TNFSF11-203ENST00000398795 A0A1B0GVX0 72 aa11.8□□□□□ -0.52
TNFSF11-203ENST00000398795 PSORS1C2Q9UIG4 136 aa11.8□□□□□ -0.52
TNFSF11-203ENST00000398795 LIMD2Q9BT23 127 aa11.78□□□□□ -0.52
TNFSF11-203ENST00000398795 PLAC8Q9NZF1 115 aa11.78□□□□□ -0.52
TNFSF11-203ENST00000398795 A8MUN3 132 aa11.78□□□□□ -0.52
TNFSF11-203ENST00000398795 RTL8CO15255 209 aa11.78□□□□□ -0.52
TNFSF11-203ENST00000398795 Q8N9P0 234 aaPredicted RBP11.78□□□□□ -0.52
TNFSF11-203ENST00000398795 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
TNFSF11-203ENST00000398795 COL7A1Q02388 2944 aa11.77□□□□□ -0.52
TNFSF11-203ENST00000398795 ZNF861PO60384 105 aa11.77□□□□□ -0.53
TNFSF11-203ENST00000398795 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
TNFSF11-203ENST00000398795 DNAH7Q8WXX0 4024 aa11.75□□□□□ -0.53
TNFSF11-203ENST00000398795 IGHV6-1A0A0B4J1U7 121 aa11.75□□□□□ -0.53
TNFSF11-203ENST00000398795 PLECQ15149 4684 aaKnown RBP11.75□□□□□ -0.53
TNFSF11-203ENST00000398795 Q5VV11 94 aa11.74□□□□□ -0.53
TNFSF11-203ENST00000398795 COA5Q86WW8 74 aa11.74□□□□□ -0.53
TNFSF11-203ENST00000398795 MRPL34Q9BQ48 92 aaKnown RBP11.73□□□□□ -0.53
TNFSF11-203ENST00000398795 CD164Q04900 197 aa11.72□□□□□ -0.53
TNFSF11-203ENST00000398795 CSMD3Q7Z407 3707 aa11.72□□□□□ -0.53
TNFSF11-203ENST00000398795 PCOTHQ58A44 107 aa11.69□□□□□ -0.54
TNFSF11-203ENST00000398795 NDUFS5O43920 106 aa11.69□□□□□ -0.54
TNFSF11-203ENST00000398795 ANAPC11Q9NYG5 84 aa11.68□□□□□ -0.54
TNFSF11-203ENST00000398795 PRR15LQ9BU68 103 aa11.64□□□□□ -0.55
TNFSF11-203ENST00000398795 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
TNFSF11-203ENST00000398795 A0A087X002 238 aa11.62□□□□□ -0.55
TNFSF11-203ENST00000398795 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
TNFSF11-203ENST00000398795 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
TNFSF11-203ENST00000398795 CHKB-CPT1BH3BT56 60 aa11.61□□□□□ -0.55
TNFSF11-203ENST00000398795 IGLV7-43P04211 117 aa11.61□□□□□ -0.55
TNFSF11-203ENST00000398795 Q75L30 129 aa11.61□□□□□ -0.55
TNFSF11-203ENST00000398795 TENM2Q9NT68 2774 aa11.59□□□□□ -0.55
TNFSF11-203ENST00000398795 STARD9Q9P2P6 4700 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms