RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CFDP00746 253 aaPredicted RBP0.23□□□□□ -2.37
CD47-203ENST00000398258 IFNGP01579 166 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 HMGN2P05204 90 aaKnown RBP0.23□□□□□ -2.37
CD47-203ENST00000398258 DEFB131AP59861 70 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 HAMPP81172 84 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 PSMG4Q5JS54 123 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 Q5VV11 94 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 MRPL54Q6P161 138 aaKnown RBP0.23□□□□□ -2.37
CD47-203ENST00000398258 HEPN1Q6WQI6 88 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 KRTAP8-1Q8IUC2 63 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 MYOZ3Q8TDC0 251 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 RHPN1-AS1Q9BWJ2 59 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 FXYD6Q9H0Q3 95 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 ZFHX3Q15911 3703 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 KMT2CQ8NEZ4 4911 aaKnown RBP0.23□□□□□ -2.37
CD47-203ENST00000398258 NBPF19A0A087WUL8 3843 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 TACC2O95359 2948 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 LINC00587B1AMM8 73 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 F8WEM9 126 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 K7EP34 96 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 K7EQZ3 153 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 CCL22O00626 93 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 MT1HL1P0DM35 61 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 APELAP0DMC3 54 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 SNCAP37840 140 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 S100A10P60903 97 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 MT1HP80294 61 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 KRTAP19-6Q3LI70 58 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 C9orf153Q5TBE3 101 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 LEAP2Q969E1 77 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 CGREF1Q99674 301 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 SPANXDQ9BXN6 97 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 NOP10Q9NPE3 64 aaKnown RBP0.22□□□□□ -2.37
CD47-203ENST00000398258 V9GYH0 126 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 RYR3Q15413 4870 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 MYH13Q9UKX3 1938 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 DNAJC13O75165 2243 aa0.22□□□□□ -2.37
CD47-203ENST00000398258 KNL1Q8NG31 2342 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 RYR1P21817 5038 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 WNK2Q9Y3S1 2297 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 SPENQ96T58 3664 aaKnown RBP0.21□□□□□ -2.38
CD47-203ENST00000398258 RYR2Q92736 4967 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 TRBV25-1A0A075B6N4 114 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 A0A096LPF7 62 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 LOC285095A0A1B0GVY8 99 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 NDUFA1O15239 70 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 SPINK4O60575 86 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 NDUFA3O95167 84 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 S100A1P23297 94 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 MT4P47944 62 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 RBP2P50120 134 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 PPP3R1P63098 170 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 SFTA2Q6UW10 78 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 C6orf201Q7Z4U5 140 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 C5orf38Q86SI9 138 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 WFDC10BQ8IUB3 73 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 C8orf59Q8N0T1 100 aaPredicted RBP0.21□□□□□ -2.38
CD47-203ENST00000398258 GAFA1Q96PS6 74 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 CRIPTQ9P021 101 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 GNG8Q9UK08 70 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 LENEPQ9Y5L5 61 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 ARL2-SNX15V9GYD0 113 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 HYDINQ4G0P3 5121 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 TNCP24821 2201 aa0.21□□□□□ -2.38
CD47-203ENST00000398258 EPPK1P58107 5090 aaKnown RBP0.21□□□□□ -2.38
CD47-203ENST00000398258 TRBV7-3A0A075B6L6 115 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 A0A0G2JND7 137 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 LINC01546A6NGU7 62 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 SNRPGP15A8MWD9 76 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 F6UZH7 168 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 SSSCA1O60232 199 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 BCE1O60756 84 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 SMIM11AP58511 58 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 WHAMMP3Q1A5X7 153 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 NCBP2-AS2Q69YL0 99 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 COMMD6Q7Z4G1 85 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 FAM213BQ8TBF2 198 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 C2orf88Q9BSF0 95 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 CYP4F30PQ9H0H9 118 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 NDUFA4L2Q9NRX3 87 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 BIRC6Q9NR09 4857 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 DMDP11532 3685 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 PKDREJQ9NTG1 2253 aa0.2□□□□□ -2.38
CD47-203ENST00000398258 DNHD1Q96M86 4753 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 USF3Q68DE3 2245 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 CUBNO60494 3623 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 VPS13CQ709C8 3753 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 AKAP6Q13023 2319 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 PLCE1Q9P212 2302 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 HRNRQ86YZ3 2850 aaPredicted RBP0.19□□□□□ -2.38
CD47-203ENST00000398258 TRAV21A0A0B4J279 112 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 ETDCA0A1B0GVM5 59 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 F8VRH5 84 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 H0YAA0 97 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 CHKB-CPT1BH3BT56 60 aa0.19□□□□□ -2.38
CD47-203ENST00000398258 MT-ATP8P03928 68 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms