RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 LCE6AA0A183 80 aa12.6□□□□□ -0.39
AGAP3-202ENST00000397238 CSMD3Q7Z407 3707 aa12.6□□□□□ -0.39
AGAP3-202ENST00000397238 TRAV22A0A0B4J277 110 aa12.59□□□□□ -0.39
AGAP3-202ENST00000397238 A0A096LNI7 61 aa12.59□□□□□ -0.39
AGAP3-202ENST00000397238 A0A1B0GW54 56 aa12.58□□□□□ -0.39
AGAP3-202ENST00000397238 MP68P56378 58 aa12.58□□□□□ -0.4
AGAP3-202ENST00000397238 TLX1NBP0CAT3 122 aa12.57□□□□□ -0.4
AGAP3-202ENST00000397238 A8MUN3 132 aa12.57□□□□□ -0.4
AGAP3-202ENST00000397238 F8WDY8 70 aa12.57□□□□□ -0.4
AGAP3-202ENST00000397238 LINC00588Q9Y4M8 146 aa12.56□□□□□ -0.4
AGAP3-202ENST00000397238 DNAH10OSP0CZ25 163 aa12.55□□□□□ -0.4
AGAP3-202ENST00000397238 PLA2G2DQ9UNK4 145 aa12.55□□□□□ -0.4
AGAP3-202ENST00000397238 Q1T7F1 81 aa12.54□□□□□ -0.4
AGAP3-202ENST00000397238 A8MU10 97 aa12.52□□□□□ -0.41
AGAP3-202ENST00000397238 IGLV5-37A0A075B6J1 123 aa12.5□□□□□ -0.41
AGAP3-202ENST00000397238 UBE2AP49459 152 aa12.5□□□□□ -0.41
AGAP3-202ENST00000397238 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
AGAP3-202ENST00000397238 H0Y9P7 68 aa12.48□□□□□ -0.41
AGAP3-202ENST00000397238 NDUFB1O75438 58 aa12.47□□□□□ -0.41
AGAP3-202ENST00000397238 CASC2Q6XLA1 102 aa12.47□□□□□ -0.41
AGAP3-202ENST00000397238 SEC61GP60059 68 aa12.46□□□□□ -0.41
AGAP3-202ENST00000397238 CYP4F30PQ9H0H9 118 aa12.45□□□□□ -0.42
AGAP3-202ENST00000397238 PRR15Q8IV56 129 aa12.44□□□□□ -0.42
AGAP3-202ENST00000397238 H0Y9J4 135 aa12.43□□□□□ -0.42
AGAP3-202ENST00000397238 STAB2Q8WWQ8 2551 aa12.42□□□□□ -0.42
AGAP3-202ENST00000397238 PMAIP1Q13794 54 aa12.42□□□□□ -0.42
AGAP3-202ENST00000397238 CHTF8P0CG12 524 aa12.41□□□□□ -0.42
AGAP3-202ENST00000397238 CHKB-CPT1BH3BT56 60 aa12.41□□□□□ -0.42
AGAP3-202ENST00000397238 COL7A1Q02388 2944 aa12.39□□□□□ -0.43
AGAP3-202ENST00000397238 PHF5AQ7RTV0 110 aaKnown RBP12.39□□□□□ -0.43
AGAP3-202ENST00000397238 DNAH10Q8IVF4 4471 aa12.38□□□□□ -0.43
AGAP3-202ENST00000397238 PRR15LQ9BU68 103 aa12.37□□□□□ -0.43
AGAP3-202ENST00000397238 CNBPP62633 177 aaKnown RBP12.37□□□□□ -0.43
AGAP3-202ENST00000397238 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
AGAP3-202ENST00000397238 SPTSSBQ8NFR3 76 aa12.35□□□□□ -0.43
AGAP3-202ENST00000397238 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
AGAP3-202ENST00000397238 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
AGAP3-202ENST00000397238 Q5VV11 94 aa12.35□□□□□ -0.43
AGAP3-202ENST00000397238 LYSTQ99698 3801 aa12.31□□□□□ -0.44
AGAP3-202ENST00000397238 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
AGAP3-202ENST00000397238 Q8N9P0 234 aaPredicted RBP12.3□□□□□ -0.44
AGAP3-202ENST00000397238 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
AGAP3-202ENST00000397238 K7EIL1 84 aa12.3□□□□□ -0.44
AGAP3-202ENST00000397238 A8MWP4 228 aa12.29□□□□□ -0.44
AGAP3-202ENST00000397238 KRTAP1-5Q9BYS1 174 aa12.28□□□□□ -0.44
AGAP3-202ENST00000397238 CMYA5Q8N3K9 4069 aa12.28□□□□□ -0.44
AGAP3-202ENST00000397238 IGLV8-61A0A075B6I0 122 aa12.26□□□□□ -0.45
AGAP3-202ENST00000397238 LINC00472Q9H8W2 130 aa12.25□□□□□ -0.45
AGAP3-202ENST00000397238 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
AGAP3-202ENST00000397238 A6NED7 52 aa12.24□□□□□ -0.45
AGAP3-202ENST00000397238 NDUFS5O43920 106 aa12.24□□□□□ -0.45
AGAP3-202ENST00000397238 COA5Q86WW8 74 aa12.23□□□□□ -0.45
AGAP3-202ENST00000397238 DNAH1Q9P2D7 4330 aa12.22□□□□□ -0.45
AGAP3-202ENST00000397238 SPANXA2-OT1Q8N9U9 137 aa12.22□□□□□ -0.45
AGAP3-202ENST00000397238 LIMD2Q9BT23 127 aa12.21□□□□□ -0.45
AGAP3-202ENST00000397238 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
AGAP3-202ENST00000397238 SPAG11AQ6PDA7 123 aa12.19□□□□□ -0.46
AGAP3-202ENST00000397238 C9orf163Q8N9P6 203 aa12.18□□□□□ -0.46
AGAP3-202ENST00000397238 MMP24-AS1A0A0U1RRL7 71 aa12.18□□□□□ -0.46
AGAP3-202ENST00000397238 H3BPC8 53 aa12.17□□□□□ -0.46
AGAP3-202ENST00000397238 IGHV6-1A0A0B4J1U7 121 aa12.13□□□□□ -0.47
AGAP3-202ENST00000397238 LCA10Q71F78 164 aa12.13□□□□□ -0.47
AGAP3-202ENST00000397238 CD164Q04900 197 aa12.12□□□□□ -0.47
AGAP3-202ENST00000397238 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
AGAP3-202ENST00000397238 PANO1I0J062 215 aa12.11□□□□□ -0.47
AGAP3-202ENST00000397238 HUWE1Q7Z6Z7 4374 aaKnown RBP12.1□□□□□ -0.47
AGAP3-202ENST00000397238 MDFIQ99750 246 aa12.1□□□□□ -0.47
AGAP3-202ENST00000397238 IGLV7-46A0A075B6I9 117 aa12.09□□□□□ -0.47
AGAP3-202ENST00000397238 SPRR1BP22528 89 aa12.07□□□□□ -0.48
AGAP3-202ENST00000397238 ANAPC11Q9NYG5 84 aa12.07□□□□□ -0.48
AGAP3-202ENST00000397238 DNAH3Q8TD57 4116 aa12.05□□□□□ -0.48
AGAP3-202ENST00000397238 C8orf17Q9NRJ1 99 aa12.03□□□□□ -0.48
AGAP3-202ENST00000397238 Q75L30 129 aa12.02□□□□□ -0.48
AGAP3-202ENST00000397238 CDK2AP2O75956 126 aa12.02□□□□□ -0.49
AGAP3-202ENST00000397238 LOC101927531A0A1B0GV80 90 aa12.01□□□□□ -0.49
AGAP3-202ENST00000397238 MOBPQ13875 183 aa12□□□□□ -0.49
AGAP3-202ENST00000397238 SPINK6Q6UWN8 80 aa12□□□□□ -0.49
AGAP3-202ENST00000397238 Q96NJ1 140 aa12□□□□□ -0.49
AGAP3-202ENST00000397238 A0A087X002 238 aa11.99□□□□□ -0.49
AGAP3-202ENST00000397238 NOTCH2NLQ7Z3S9 236 aa11.99□□□□□ -0.49
AGAP3-202ENST00000397238 C14orf177Q52M58 125 aa11.98□□□□□ -0.49
AGAP3-202ENST00000397238 ATP11AUNQ6ZP68 121 aa11.97□□□□□ -0.49
AGAP3-202ENST00000397238 KTN1-AS1Q86SY8 53 aa11.97□□□□□ -0.49
AGAP3-202ENST00000397238 TP53AIP1Q9HCN2 124 aa11.96□□□□□ -0.49
AGAP3-202ENST00000397238 HRES1P13985 223 aa11.96□□□□□ -0.5
AGAP3-202ENST00000397238 SPINK7P58062 85 aa11.95□□□□□ -0.5
AGAP3-202ENST00000397238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
AGAP3-202ENST00000397238 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
AGAP3-202ENST00000397238 DNAH7Q8WXX0 4024 aa11.92□□□□□ -0.5
AGAP3-202ENST00000397238 A0A1B0GVX0 72 aa11.92□□□□□ -0.5
AGAP3-202ENST00000397238 CDC42SE1Q9NRR8 79 aa11.91□□□□□ -0.5
AGAP3-202ENST00000397238 MRPL34Q9BQ48 92 aaKnown RBP11.9□□□□□ -0.5
AGAP3-202ENST00000397238 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
AGAP3-202ENST00000397238 LINC01558Q9Y6Z2 57 aa11.89□□□□□ -0.51
AGAP3-202ENST00000397238 KRTAP13-1Q8IUC0 172 aa11.89□□□□□ -0.51
AGAP3-202ENST00000397238 APLNQ9ULZ1 77 aa11.88□□□□□ -0.51
AGAP3-202ENST00000397238 Q6ZR54 194 aa11.88□□□□□ -0.51
AGAP3-202ENST00000397238 A6NN06 94 aa11.86□□□□□ -0.51
AGAP3-202ENST00000397238 ASB16-AS1Q495Z4 193 aa11.84□□□□□ -0.51
AGAP3-202ENST00000397238 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms