RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 C11orf45Q8TAV5 145 aa11.55□□□□□ -0.56
HERPUD2-202ENST00000396081 A8MU10 97 aa11.54□□□□□ -0.56
HERPUD2-202ENST00000396081 IGLV5-37A0A075B6J1 123 aa11.53□□□□□ -0.56
HERPUD2-202ENST00000396081 IGKV2-24A0A0C4DH68 120 aa11.53□□□□□ -0.56
HERPUD2-202ENST00000396081 MAST4O15021 2626 aa11.53□□□□□ -0.56
HERPUD2-202ENST00000396081 NOTCH1P46531 2555 aa11.52□□□□□ -0.57
HERPUD2-202ENST00000396081 H0Y9P7 68 aa11.51□□□□□ -0.57
HERPUD2-202ENST00000396081 DNAH10OSP0CZ25 163 aa11.51□□□□□ -0.57
HERPUD2-202ENST00000396081 CHKB-CPT1BH3BT56 60 aa11.49□□□□□ -0.57
HERPUD2-202ENST00000396081 CASC2Q6XLA1 102 aa11.49□□□□□ -0.57
HERPUD2-202ENST00000396081 KRTAP10-11P60412 298 aa11.48□□□□□ -0.57
HERPUD2-202ENST00000396081 UBE2AP49459 152 aa11.47□□□□□ -0.57
HERPUD2-202ENST00000396081 A0A096LNI7 61 aa11.47□□□□□ -0.57
HERPUD2-202ENST00000396081 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.57
HERPUD2-202ENST00000396081 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.57
HERPUD2-202ENST00000396081 Q5VV11 94 aa11.45□□□□□ -0.58
HERPUD2-202ENST00000396081 PRR15LQ9BU68 103 aa11.45□□□□□ -0.58
HERPUD2-202ENST00000396081 STAB1Q9NY15 2570 aa11.42□□□□□ -0.58
HERPUD2-202ENST00000396081 SPTSSBQ8NFR3 76 aa11.42□□□□□ -0.58
HERPUD2-202ENST00000396081 COL6A5A8TX70 2615 aa11.41□□□□□ -0.58
HERPUD2-202ENST00000396081 KRTAP29-1A8MX34 341 aaPredicted RBP11.41□□□□□ -0.58
HERPUD2-202ENST00000396081 H0Y9J4 135 aa11.41□□□□□ -0.58
HERPUD2-202ENST00000396081 Q8N9P0 234 aaPredicted RBP11.4□□□□□ -0.58
HERPUD2-202ENST00000396081 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
HERPUD2-202ENST00000396081 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
HERPUD2-202ENST00000396081 SPANXA2-OT1Q8N9U9 137 aa11.35□□□□□ -0.59
HERPUD2-202ENST00000396081 J3QKU1 62 aa11.35□□□□□ -0.59
HERPUD2-202ENST00000396081 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
HERPUD2-202ENST00000396081 A8MWP4 228 aa11.34□□□□□ -0.59
HERPUD2-202ENST00000396081 IGLV8-61A0A075B6I0 122 aa11.33□□□□□ -0.6
HERPUD2-202ENST00000396081 A6NED7 52 aa11.33□□□□□ -0.6
HERPUD2-202ENST00000396081 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
HERPUD2-202ENST00000396081 C16orf90A8MZG2 172 aa11.32□□□□□ -0.6
HERPUD2-202ENST00000396081 H3BPC8 53 aa11.32□□□□□ -0.6
HERPUD2-202ENST00000396081 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
HERPUD2-202ENST00000396081 PHF5AQ7RTV0 110 aaKnown RBP11.31□□□□□ -0.6
HERPUD2-202ENST00000396081 COA5Q86WW8 74 aa11.31□□□□□ -0.6
HERPUD2-202ENST00000396081 FBN1P35555 2871 aaKnown RBP11.3□□□□□ -0.6
HERPUD2-202ENST00000396081 LINC00472Q9H8W2 130 aa11.29□□□□□ -0.6
HERPUD2-202ENST00000396081 CD164Q04900 197 aa11.28□□□□□ -0.6
HERPUD2-202ENST00000396081 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
HERPUD2-202ENST00000396081 C9orf163Q8N9P6 203 aa11.27□□□□□ -0.6
HERPUD2-202ENST00000396081 ANK2Q01484 3957 aa11.25□□□□□ -0.61
HERPUD2-202ENST00000396081 LCA10Q71F78 164 aa11.24□□□□□ -0.61
HERPUD2-202ENST00000396081 MMP24-AS1A0A0U1RRL7 71 aa11.23□□□□□ -0.61
HERPUD2-202ENST00000396081 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
HERPUD2-202ENST00000396081 KMT2BQ9UMN6 2715 aaPredicted RBP11.23□□□□□ -0.61
HERPUD2-202ENST00000396081 NDUFS5O43920 106 aa11.22□□□□□ -0.61
HERPUD2-202ENST00000396081 CSMD3Q7Z407 3707 aa11.2□□□□□ -0.62
HERPUD2-202ENST00000396081 IGLV7-46A0A075B6I9 117 aa11.2□□□□□ -0.62
HERPUD2-202ENST00000396081 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
HERPUD2-202ENST00000396081 KRTAP1-5Q9BYS1 174 aa11.19□□□□□ -0.62
HERPUD2-202ENST00000396081 Q75L30 129 aa11.18□□□□□ -0.62
HERPUD2-202ENST00000396081 KTN1-AS1Q86SY8 53 aa11.16□□□□□ -0.62
HERPUD2-202ENST00000396081 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
HERPUD2-202ENST00000396081 ATP11AUNQ6ZP68 121 aa11.15□□□□□ -0.62
HERPUD2-202ENST00000396081 COL7A1Q02388 2944 aa11.15□□□□□ -0.63
HERPUD2-202ENST00000396081 LOC101927531A0A1B0GV80 90 aa11.15□□□□□ -0.63
HERPUD2-202ENST00000396081 SPRR1BP22528 89 aa11.14□□□□□ -0.63
HERPUD2-202ENST00000396081 STAB2Q8WWQ8 2551 aa11.13□□□□□ -0.63
HERPUD2-202ENST00000396081 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
HERPUD2-202ENST00000396081 UBE2DNLQ8IWF7 75 aa11.11□□□□□ -0.63
HERPUD2-202ENST00000396081 DNAH10Q8IVF4 4471 aa11.09□□□□□ -0.63
HERPUD2-202ENST00000396081 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
HERPUD2-202ENST00000396081 TP53AIP1Q9HCN2 124 aa11.07□□□□□ -0.64
HERPUD2-202ENST00000396081 CDC42SE1Q9NRR8 79 aa11.07□□□□□ -0.64
HERPUD2-202ENST00000396081 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
HERPUD2-202ENST00000396081 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
HERPUD2-202ENST00000396081 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
HERPUD2-202ENST00000396081 MOBPQ13875 183 aa11.05□□□□□ -0.64
HERPUD2-202ENST00000396081 LINC01558Q9Y6Z2 57 aa11.05□□□□□ -0.64
HERPUD2-202ENST00000396081 KRTAP24-1Q3LI83 254 aa11.04□□□□□ -0.64
HERPUD2-202ENST00000396081 SPINK7P58062 85 aa11.04□□□□□ -0.64
HERPUD2-202ENST00000396081 A6NN06 94 aa11.03□□□□□ -0.64
HERPUD2-202ENST00000396081 HRES1P13985 223 aa11.03□□□□□ -0.64
HERPUD2-202ENST00000396081 Q96NJ1 140 aa11.03□□□□□ -0.64
HERPUD2-202ENST00000396081 PANO1I0J062 215 aa11.03□□□□□ -0.64
HERPUD2-202ENST00000396081 DNAH1Q9P2D7 4330 aa11.02□□□□□ -0.65
HERPUD2-202ENST00000396081 C14orf177Q52M58 125 aa11.01□□□□□ -0.65
HERPUD2-202ENST00000396081 A0A1B0GVX0 72 aa10.98□□□□□ -0.65
HERPUD2-202ENST00000396081 Q6ZR54 194 aa10.98□□□□□ -0.65
HERPUD2-202ENST00000396081 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
HERPUD2-202ENST00000396081 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
HERPUD2-202ENST00000396081 A0A087X002 238 aa10.97□□□□□ -0.65
HERPUD2-202ENST00000396081 K7EIL1 84 aa10.97□□□□□ -0.65
HERPUD2-202ENST00000396081 NOTCH2NLQ7Z3S9 236 aa10.97□□□□□ -0.65
HERPUD2-202ENST00000396081 MRPL34Q9BQ48 92 aaKnown RBP10.97□□□□□ -0.65
HERPUD2-202ENST00000396081 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.66
HERPUD2-202ENST00000396081 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
HERPUD2-202ENST00000396081 LYSTQ99698 3801 aa10.95□□□□□ -0.66
HERPUD2-202ENST00000396081 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
HERPUD2-202ENST00000396081 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
HERPUD2-202ENST00000396081 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
HERPUD2-202ENST00000396081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.88□□□□□ -0.67
HERPUD2-202ENST00000396081 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
HERPUD2-202ENST00000396081 Q5W150 140 aa10.85□□□□□ -0.67
HERPUD2-202ENST00000396081 MDFIQ99750 246 aa10.85□□□□□ -0.67
HERPUD2-202ENST00000396081 DNAH9Q9NYC9 4486 aa10.85□□□□□ -0.67
HERPUD2-202ENST00000396081 CMYA5Q8N3K9 4069 aa10.84□□□□□ -0.67
HERPUD2-202ENST00000396081 WWC2-AS2Q96NR7 200 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms