RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
LTN1-202ENST00000389194 FAM104AQ969W3 186 aa3.26□□□□□ -1.89
LTN1-202ENST00000389194 A0A1B0GU69 56 aa3.26□□□□□ -1.89
LTN1-202ENST00000389194 DSCR10P59022 87 aa3.26□□□□□ -1.89
LTN1-202ENST00000389194 Q96NJ1 140 aa3.25□□□□□ -1.89
LTN1-202ENST00000389194 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
LTN1-202ENST00000389194 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
LTN1-202ENST00000389194 OBSCN-AS1Q96MR7 158 aa3.25□□□□□ -1.89
LTN1-202ENST00000389194 LINC00313P59037 77 aa3.25□□□□□ -1.89
LTN1-202ENST00000389194 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 PRR34Q9NV39 138 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 LINC00336Q6ZUF6 198 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 F8WDY8 70 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 KRTAP1-1Q07627 177 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 Q8NDZ9 215 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 BCE1O60756 84 aa3.24□□□□□ -1.89
LTN1-202ENST00000389194 H3BNG1 76 aa3.23□□□□□ -1.89
LTN1-202ENST00000389194 KCNQ1DNQ9H478 68 aa3.23□□□□□ -1.89
LTN1-202ENST00000389194 PLA2G1BP04054 148 aaKnown RBP3.23□□□□□ -1.89
LTN1-202ENST00000389194 ATP11AUNQ6ZP68 121 aa3.23□□□□□ -1.89
LTN1-202ENST00000389194 A0A1W2PNM2 257 aa3.23□□□□□ -1.89
LTN1-202ENST00000389194 H7BZZ5 65 aa3.23□□□□□ -1.89
LTN1-202ENST00000389194 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
LTN1-202ENST00000389194 COA5Q86WW8 74 aa3.22□□□□□ -1.89
LTN1-202ENST00000389194 A8MWP4 228 aa3.22□□□□□ -1.89
LTN1-202ENST00000389194 LIMD2Q9BT23 127 aa3.22□□□□□ -1.89
LTN1-202ENST00000389194 ACYP2P14621 99 aa3.21□□□□□ -1.9
LTN1-202ENST00000389194 HRNRQ86YZ3 2850 aaPredicted RBP3.21□□□□□ -1.9
LTN1-202ENST00000389194 RPS28P62857 69 aaKnown RBP3.21□□□□□ -1.9
LTN1-202ENST00000389194 PRR15Q8IV56 129 aa3.21□□□□□ -1.9
LTN1-202ENST00000389194 SPENQ96T58 3664 aaKnown RBP3.21□□□□□ -1.9
LTN1-202ENST00000389194 MRPL34Q9BQ48 92 aaKnown RBP3.2□□□□□ -1.9
LTN1-202ENST00000389194 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
LTN1-202ENST00000389194 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
LTN1-202ENST00000389194 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
LTN1-202ENST00000389194 LINC01600Q96MT4 127 aa3.19□□□□□ -1.9
LTN1-202ENST00000389194 Q8N1X5 172 aa3.19□□□□□ -1.9
LTN1-202ENST00000389194 A0A087WTM6 91 aa3.19□□□□□ -1.9
LTN1-202ENST00000389194 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
LTN1-202ENST00000389194 KLKP1Q107X0 134 aa3.18□□□□□ -1.9
LTN1-202ENST00000389194 PRR26Q8N8Z3 221 aa3.17□□□□□ -1.9
LTN1-202ENST00000389194 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
LTN1-202ENST00000389194 ZNF861PO60384 105 aa3.17□□□□□ -1.9
LTN1-202ENST00000389194 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.17□□□□□ -1.9
LTN1-202ENST00000389194 TENM4Q6N022 2769 aa3.16□□□□□ -1.9
LTN1-202ENST00000389194 SSBP3-AS1Q7Z2R9 100 aa3.16□□□□□ -1.9
LTN1-202ENST00000389194 FAM229BQ4G0N7 80 aa3.16□□□□□ -1.9
LTN1-202ENST00000389194 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
LTN1-202ENST00000389194 A0A0D9SG42 100 aa3.15□□□□□ -1.9
LTN1-202ENST00000389194 TNP2Q05952 138 aa3.15□□□□□ -1.9
LTN1-202ENST00000389194 NBPF19A0A087WUL8 3843 aa3.15□□□□□ -1.9
LTN1-202ENST00000389194 PKD1L1Q8TDX9 2849 aa3.15□□□□□ -1.91
LTN1-202ENST00000389194 ZFHX3Q15911 3703 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 MXRA5Q9NR99 2828 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 APLNQ9ULZ1 77 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 FAM229AH3BQW9 127 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 WWC2-AS2Q96NR7 200 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 LINC01554Q52M75 96 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
LTN1-202ENST00000389194 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
LTN1-202ENST00000389194 A0A1B0GW54 56 aa3.13□□□□□ -1.91
LTN1-202ENST00000389194 IGLV7-43P04211 117 aa3.13□□□□□ -1.91
LTN1-202ENST00000389194 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
LTN1-202ENST00000389194 OCR1Q9BZK8 76 aa3.13□□□□□ -1.91
LTN1-202ENST00000389194 LINC00304Q8N9R0 145 aa3.13□□□□□ -1.91
LTN1-202ENST00000389194 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
LTN1-202ENST00000389194 TLX1NBP0CAT3 122 aa3.12□□□□□ -1.91
LTN1-202ENST00000389194 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
LTN1-202ENST00000389194 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
LTN1-202ENST00000389194 C8orf87E5RJ46 101 aa3.12□□□□□ -1.91
LTN1-202ENST00000389194 H3BPC8 53 aa3.12□□□□□ -1.91
LTN1-202ENST00000389194 VWFP04275 2813 aa3.11□□□□□ -1.91
LTN1-202ENST00000389194 MIR22HGQ0VDD5 57 aa3.11□□□□□ -1.91
LTN1-202ENST00000389194 UQCR11O14957 56 aa3.1□□□□□ -1.91
LTN1-202ENST00000389194 CNBPP62633 177 aaKnown RBP3.1□□□□□ -1.91
LTN1-202ENST00000389194 PLA2G2DQ9UNK4 145 aa3.1□□□□□ -1.91
LTN1-202ENST00000389194 Q8N9P0 234 aaPredicted RBP3.09□□□□□ -1.91
LTN1-202ENST00000389194 OXTP01178 125 aa3.09□□□□□ -1.91
LTN1-202ENST00000389194 FBN1P35555 2871 aaKnown RBP3.09□□□□□ -1.91
LTN1-202ENST00000389194 TENM1Q9UKZ4 2725 aa3.09□□□□□ -1.91
LTN1-202ENST00000389194 KRTAP17-1Q9BYP8 105 aa3.09□□□□□ -1.91
LTN1-202ENST00000389194 TENM3Q9P273 2699 aa3.09□□□□□ -1.92
LTN1-202ENST00000389194 FP248Q71RG6 208 aaPredicted RBP3.08□□□□□ -1.92
LTN1-202ENST00000389194 J3QL48 77 aa3.08□□□□□ -1.92
LTN1-202ENST00000389194 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
LTN1-202ENST00000389194 PDZD2O15018 2839 aa3.08□□□□□ -1.92
LTN1-202ENST00000389194 PANO1I0J062 215 aa3.07□□□□□ -1.92
LTN1-202ENST00000389194 Q5XG85 94 aa3.07□□□□□ -1.92
LTN1-202ENST00000389194 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
LTN1-202ENST00000389194 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
LTN1-202ENST00000389194 IGLV5-37A0A075B6J1 123 aa3.06□□□□□ -1.92
LTN1-202ENST00000389194 HRES1P13985 223 aa3.06□□□□□ -1.92
LTN1-202ENST00000389194 CYP4F30PQ9H0H9 118 aa3.06□□□□□ -1.92
LTN1-202ENST00000389194 CD164Q04900 197 aa3.05□□□□□ -1.92
LTN1-202ENST00000389194 MMP24-AS1A0A0U1RRL7 71 aa3.04□□□□□ -1.92
LTN1-202ENST00000389194 KRTAP26-1Q6PEX3 210 aa3.04□□□□□ -1.92
LTN1-202ENST00000389194 SRRM2Q9UQ35 2752 aaKnown RBP3.03□□□□□ -1.92
LTN1-202ENST00000389194 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
LTN1-202ENST00000389194 KRTAP10-2P60368 255 aa3.03□□□□□ -1.92
LTN1-202ENST00000389194 SPINK7P58062 85 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms