RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
SHROOM1-203ENST00000378679 PRR15LQ9BU68 103 aa9.18□□□□□ -0.94
SHROOM1-203ENST00000378679 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
SHROOM1-203ENST00000378679 OTOGQ6ZRI0 2925 aa9.18□□□□□ -0.94
SHROOM1-203ENST00000378679 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
SHROOM1-203ENST00000378679 CXCL6P80162 114 aa9.17□□□□□ -0.94
SHROOM1-203ENST00000378679 H7BZZ5 65 aa9.17□□□□□ -0.94
SHROOM1-203ENST00000378679 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
SHROOM1-203ENST00000378679 CASC2Q6XLA1 102 aa9.15□□□□□ -0.94
SHROOM1-203ENST00000378679 PLA2G2DQ9UNK4 145 aa9.15□□□□□ -0.95
SHROOM1-203ENST00000378679 Q8N377 158 aa9.13□□□□□ -0.95
SHROOM1-203ENST00000378679 A0A0G2JQZ4 141 aa9.13□□□□□ -0.95
SHROOM1-203ENST00000378679 A0A1B0GW54 56 aa9.1□□□□□ -0.95
SHROOM1-203ENST00000378679 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
SHROOM1-203ENST00000378679 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
SHROOM1-203ENST00000378679 OXTP01178 125 aa9.09□□□□□ -0.95
SHROOM1-203ENST00000378679 Q8NDZ9 215 aa9.08□□□□□ -0.96
SHROOM1-203ENST00000378679 ZNF469Q96JG9 3925 aaPredicted RBP9.07□□□□□ -0.96
SHROOM1-203ENST00000378679 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
SHROOM1-203ENST00000378679 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
SHROOM1-203ENST00000378679 RPL37AP61513 92 aaKnown RBP9.06□□□□□ -0.96
SHROOM1-203ENST00000378679 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
SHROOM1-203ENST00000378679 PKD1L1Q8TDX9 2849 aa9.05□□□□□ -0.96
SHROOM1-203ENST00000378679 H0Y9P7 68 aa9.05□□□□□ -0.96
SHROOM1-203ENST00000378679 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
SHROOM1-203ENST00000378679 TNP2Q05952 138 aa9.05□□□□□ -0.96
SHROOM1-203ENST00000378679 ZNF861PO60384 105 aa9.04□□□□□ -0.96
SHROOM1-203ENST00000378679 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
SHROOM1-203ENST00000378679 A8MUN3 132 aa9.03□□□□□ -0.96
SHROOM1-203ENST00000378679 KRTAP26-1Q6PEX3 210 aa9.03□□□□□ -0.96
SHROOM1-203ENST00000378679 IGFL1Q6UW32 110 aa9.03□□□□□ -0.96
SHROOM1-203ENST00000378679 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
SHROOM1-203ENST00000378679 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.96
SHROOM1-203ENST00000378679 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
SHROOM1-203ENST00000378679 K7EQZ3 153 aa9.02□□□□□ -0.97
SHROOM1-203ENST00000378679 ANAPC11Q9NYG5 84 aa9.01□□□□□ -0.97
SHROOM1-203ENST00000378679 Q5XG85 94 aa9.01□□□□□ -0.97
SHROOM1-203ENST00000378679 RETNLBQ9BQ08 111 aa9□□□□□ -0.97
SHROOM1-203ENST00000378679 TYMSOSQ8TAI1 123 aa8.99□□□□□ -0.97
SHROOM1-203ENST00000378679 TENM3Q9P273 2699 aa8.99□□□□□ -0.97
SHROOM1-203ENST00000378679 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.98□□□□□ -0.97
SHROOM1-203ENST00000378679 PLA2G1BP04054 148 aaKnown RBP8.98□□□□□ -0.97
SHROOM1-203ENST00000378679 C1orf64Q8NEQ6 169 aa8.97□□□□□ -0.97
SHROOM1-203ENST00000378679 OBSCN-AS1Q96MR7 158 aa8.97□□□□□ -0.97
SHROOM1-203ENST00000378679 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
SHROOM1-203ENST00000378679 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
SHROOM1-203ENST00000378679 hDV103S1A0JD37 113 aa8.96□□□□□ -0.97
SHROOM1-203ENST00000378679 A0A1W2PNM2 257 aa8.96□□□□□ -0.98
SHROOM1-203ENST00000378679 SPAG11AQ6PDA7 123 aa8.96□□□□□ -0.98
SHROOM1-203ENST00000378679 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
SHROOM1-203ENST00000378679 TRRAPQ9Y4A5 3859 aa8.93□□□□□ -0.98
SHROOM1-203ENST00000378679 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
SHROOM1-203ENST00000378679 FP248Q71RG6 208 aaPredicted RBP8.92□□□□□ -0.98
SHROOM1-203ENST00000378679 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
SHROOM1-203ENST00000378679 SPRR4Q96PI1 79 aa8.92□□□□□ -0.98
SHROOM1-203ENST00000378679 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
SHROOM1-203ENST00000378679 A8MWP4 228 aa8.89□□□□□ -0.99
SHROOM1-203ENST00000378679 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
SHROOM1-203ENST00000378679 SPRR1AP35321 89 aa8.87□□□□□ -0.99
SHROOM1-203ENST00000378679 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
SHROOM1-203ENST00000378679 IGKV2D-30A0A075B6S6 120 aa8.85□□□□□ -0.99
SHROOM1-203ENST00000378679 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
SHROOM1-203ENST00000378679 LINC00313P59037 77 aa8.84□□□□□ -0.99
SHROOM1-203ENST00000378679 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
SHROOM1-203ENST00000378679 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
SHROOM1-203ENST00000378679 SPINK1P00995 79 aa8.82□□□□□ -1
SHROOM1-203ENST00000378679 OCR1Q9BZK8 76 aa8.81□□□□□ -1
SHROOM1-203ENST00000378679 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
SHROOM1-203ENST00000378679 MRPL34Q9BQ48 92 aaKnown RBP8.77□□□□□ -1.01
SHROOM1-203ENST00000378679 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1.01
SHROOM1-203ENST00000378679 CD164Q04900 197 aa8.77□□□□□ -1.01
SHROOM1-203ENST00000378679 LINC00304Q8N9R0 145 aa8.77□□□□□ -1.01
SHROOM1-203ENST00000378679 C8orf17Q9NRJ1 99 aa8.77□□□□□ -1.01
SHROOM1-203ENST00000378679 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
SHROOM1-203ENST00000378679 AKAP9Q99996 3911 aa8.76□□□□□ -1.01
SHROOM1-203ENST00000378679 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
SHROOM1-203ENST00000378679 Q96NJ1 140 aa8.75□□□□□ -1.01
SHROOM1-203ENST00000378679 PANO1I0J062 215 aa8.75□□□□□ -1.01
SHROOM1-203ENST00000378679 COA5Q86WW8 74 aa8.75□□□□□ -1.01
SHROOM1-203ENST00000378679 Q6ZR54 194 aa8.74□□□□□ -1.01
SHROOM1-203ENST00000378679 C8orf87E5RJ46 101 aa8.73□□□□□ -1.01
SHROOM1-203ENST00000378679 DSCR10P59022 87 aa8.73□□□□□ -1.01
SHROOM1-203ENST00000378679 H3BPC8 53 aa8.72□□□□□ -1.01
SHROOM1-203ENST00000378679 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
SHROOM1-203ENST00000378679 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
SHROOM1-203ENST00000378679 KRTAP10-1P60331 282 aa8.67□□□□□ -1.02
SHROOM1-203ENST00000378679 SPRR1BP22528 89 aa8.66□□□□□ -1.02
SHROOM1-203ENST00000378679 H3BS24 57 aa8.66□□□□□ -1.02
SHROOM1-203ENST00000378679 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
SHROOM1-203ENST00000378679 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
SHROOM1-203ENST00000378679 LCE6AA0A183 80 aa8.64□□□□□ -1.03
SHROOM1-203ENST00000378679 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
SHROOM1-203ENST00000378679 TGP01266 2768 aa8.62□□□□□ -1.03
SHROOM1-203ENST00000378679 C9orf92A6NGG3 77 aa8.62□□□□□ -1.03
SHROOM1-203ENST00000378679 C7orf65Q6ZTY9 151 aa8.62□□□□□ -1.03
SHROOM1-203ENST00000378679 A0A1B0GU69 56 aa8.61□□□□□ -1.03
SHROOM1-203ENST00000378679 KRTAP7-1Q8IUC3 87 aa8.6□□□□□ -1.03
SHROOM1-203ENST00000378679 ATP11AUNQ6ZP68 121 aa8.59□□□□□ -1.03
SHROOM1-203ENST00000378679 ACYP2P14621 99 aa8.59□□□□□ -1.03
SHROOM1-203ENST00000378679 KRTAP11-1Q8IUC1 163 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms