RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZNF706Q9Y5V0 76 aaPredicted RBP10.03□□□□□ -0.8
FXN-201ENST00000377270 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
FXN-201ENST00000377270 SPANXA2-OT1Q8N9U9 137 aa10.02□□□□□ -0.81
FXN-201ENST00000377270 C6orf48Q9UBA6 75 aa10.01□□□□□ -0.81
FXN-201ENST00000377270 XAGE1AQ9HD64 81 aa10□□□□□ -0.81
FXN-201ENST00000377270 NOTCH1P46531 2555 aa10□□□□□ -0.81
FXN-201ENST00000377270 DEFB131BA0A096LNP1 70 aa9.99□□□□□ -0.81
FXN-201ENST00000377270 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
FXN-201ENST00000377270 COA5Q86WW8 74 aa9.99□□□□□ -0.81
FXN-201ENST00000377270 LINC00476Q8WZB0 136 aa9.98□□□□□ -0.81
FXN-201ENST00000377270 RETNLBQ9BQ08 111 aa9.98□□□□□ -0.81
FXN-201ENST00000377270 LINC00528Q8N1L1 170 aa9.98□□□□□ -0.81
FXN-201ENST00000377270 KRTAP26-1Q6PEX3 210 aa9.97□□□□□ -0.81
FXN-201ENST00000377270 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
FXN-201ENST00000377270 KCNQ1DNQ9H478 68 aa9.97□□□□□ -0.81
FXN-201ENST00000377270 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
FXN-201ENST00000377270 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.81
FXN-201ENST00000377270 H0Y9J4 135 aa9.95□□□□□ -0.82
FXN-201ENST00000377270 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
FXN-201ENST00000377270 K7EQZ3 153 aa9.94□□□□□ -0.82
FXN-201ENST00000377270 COL6A5A8TX70 2615 aa9.94□□□□□ -0.82
FXN-201ENST00000377270 C15orf56Q8N910 161 aa9.93□□□□□ -0.82
FXN-201ENST00000377270 DNAH3Q8TD57 4116 aa9.93□□□□□ -0.82
FXN-201ENST00000377270 IGKV2D-24A0A075B6R9 120 aa9.92□□□□□ -0.82
FXN-201ENST00000377270 DSCR10P59022 87 aa9.92□□□□□ -0.82
FXN-201ENST00000377270 LINC01556Q5JQF7 62 aa9.92□□□□□ -0.82
FXN-201ENST00000377270 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
FXN-201ENST00000377270 A0A1B0GW54 56 aa9.9□□□□□ -0.82
FXN-201ENST00000377270 IGLV5-48A0A075B6I7 105 aa9.89□□□□□ -0.83
FXN-201ENST00000377270 NBEAL1Q6ZS30 2694 aa9.89□□□□□ -0.83
FXN-201ENST00000377270 BAHCC1Q9P281 2608 aa9.88□□□□□ -0.83
FXN-201ENST00000377270 A0A1W2PNM2 257 aa9.87□□□□□ -0.83
FXN-201ENST00000377270 DEFB105AQ8NG35 78 aa9.87□□□□□ -0.83
FXN-201ENST00000377270 Q8N377 158 aa9.86□□□□□ -0.83
FXN-201ENST00000377270 DNAH10OSP0CZ25 163 aa9.85□□□□□ -0.83
FXN-201ENST00000377270 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
FXN-201ENST00000377270 H0Y9P7 68 aa9.84□□□□□ -0.83
FXN-201ENST00000377270 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
FXN-201ENST00000377270 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
FXN-201ENST00000377270 C9orf163Q8N9P6 203 aa9.83□□□□□ -0.84
FXN-201ENST00000377270 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
FXN-201ENST00000377270 RTL8CO15255 209 aa9.82□□□□□ -0.84
FXN-201ENST00000377270 K7EIL1 84 aa9.82□□□□□ -0.84
FXN-201ENST00000377270 C1orf137Q5JT78 98 aa9.8□□□□□ -0.84
FXN-201ENST00000377270 Q8NBF4 154 aa9.8□□□□□ -0.84
FXN-201ENST00000377270 A0A0A0MQY5 61 aa9.79□□□□□ -0.84
FXN-201ENST00000377270 HUWE1Q7Z6Z7 4374 aaKnown RBP9.78□□□□□ -0.84
FXN-201ENST00000377270 H3BPC8 53 aa9.78□□□□□ -0.84
FXN-201ENST00000377270 C1orf134Q5TEV5 83 aa9.78□□□□□ -0.84
FXN-201ENST00000377270 Q6ZR54 194 aa9.78□□□□□ -0.84
FXN-201ENST00000377270 MGAM2Q2M2H8 2515 aa9.78□□□□□ -0.84
FXN-201ENST00000377270 SPRR4Q96PI1 79 aa9.77□□□□□ -0.85
FXN-201ENST00000377270 TNP2Q05952 138 aa9.77□□□□□ -0.85
FXN-201ENST00000377270 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
FXN-201ENST00000377270 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
FXN-201ENST00000377270 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
FXN-201ENST00000377270 DHRS4-AS1Q9P1J3 65 aa9.73□□□□□ -0.85
FXN-201ENST00000377270 IGHV6-1A0A0B4J1U7 121 aa9.72□□□□□ -0.85
FXN-201ENST00000377270 A0A087X002 238 aa9.71□□□□□ -0.86
FXN-201ENST00000377270 C7orf33Q8WU49 177 aa9.71□□□□□ -0.86
FXN-201ENST00000377270 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
FXN-201ENST00000377270 DNAH1Q9P2D7 4330 aa9.7□□□□□ -0.86
FXN-201ENST00000377270 Q6ZRX8 168 aa9.69□□□□□ -0.86
FXN-201ENST00000377270 FAM168BA1KXE4 195 aa9.68□□□□□ -0.86
FXN-201ENST00000377270 STAB2Q8WWQ8 2551 aa9.67□□□□□ -0.86
FXN-201ENST00000377270 RPL37AP8A6NKH3 93 aa9.67□□□□□ -0.86
FXN-201ENST00000377270 PCOTHQ58A44 107 aa9.66□□□□□ -0.86
FXN-201ENST00000377270 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
FXN-201ENST00000377270 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
FXN-201ENST00000377270 KRTAP4-16G5E9R7 235 aaPredicted RBP9.64□□□□□ -0.87
FXN-201ENST00000377270 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
FXN-201ENST00000377270 ROMO1P60602 79 aa9.63□□□□□ -0.87
FXN-201ENST00000377270 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
FXN-201ENST00000377270 HRES1P13985 223 aa9.62□□□□□ -0.87
FXN-201ENST00000377270 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
FXN-201ENST00000377270 LYSTQ99698 3801 aa9.6□□□□□ -0.87
FXN-201ENST00000377270 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
FXN-201ENST00000377270 SPRR1AP35321 89 aa9.59□□□□□ -0.87
FXN-201ENST00000377270 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
FXN-201ENST00000377270 UBE2DNLQ8IWF7 75 aa9.58□□□□□ -0.88
FXN-201ENST00000377270 DNAH9Q9NYC9 4486 aa9.58□□□□□ -0.88
FXN-201ENST00000377270 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
FXN-201ENST00000377270 APLNQ9ULZ1 77 aa9.55□□□□□ -0.88
FXN-201ENST00000377270 A0A0G2JQZ4 141 aa9.55□□□□□ -0.88
FXN-201ENST00000377270 A0A1W2PNN7 141 aa9.55□□□□□ -0.88
FXN-201ENST00000377270 IGFL1Q6UW32 110 aa9.54□□□□□ -0.88
FXN-201ENST00000377270 TENM2Q9NT68 2774 aa9.54□□□□□ -0.88
FXN-201ENST00000377270 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
FXN-201ENST00000377270 A0A087WSZ3 146 aa9.52□□□□□ -0.88
FXN-201ENST00000377270 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.88
FXN-201ENST00000377270 REG3GQ6UW15 175 aa9.52□□□□□ -0.88
FXN-201ENST00000377270 A0A096LNI7 61 aa9.52□□□□□ -0.89
FXN-201ENST00000377270 MIR22HGQ0VDD5 57 aa9.5□□□□□ -0.89
FXN-201ENST00000377270 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
FXN-201ENST00000377270 DYNC2H1Q8NCM8 4307 aaKnown RBP9.46□□□□□ -0.89
FXN-201ENST00000377270 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.9
FXN-201ENST00000377270 IGLV8-61A0A075B6I0 122 aa9.44□□□□□ -0.9
FXN-201ENST00000377270 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
FXN-201ENST00000377270 P0C880 135 aa9.44□□□□□ -0.9
FXN-201ENST00000377270 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms