RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 NDUFB1O75438 58 aa14.5□□□□□ -0.09
FOXA2-201ENST00000377115 MP68P56378 58 aa14.49□□□□□ -0.09
FOXA2-201ENST00000377115 LINC00208Q96KT6 92 aa14.49□□□□□ -0.09
FOXA2-201ENST00000377115 V9GYY9 64 aa14.49□□□□□ -0.09
FOXA2-201ENST00000377115 CMYA5Q8N3K9 4069 aa14.46□□□□□ -0.09
FOXA2-201ENST00000377115 KRTAP29-1A8MX34 341 aaPredicted RBP14.44□□□□□ -0.1
FOXA2-201ENST00000377115 IGKV2-24A0A0C4DH68 120 aa14.44□□□□□ -0.1
FOXA2-201ENST00000377115 DNAH10Q8IVF4 4471 aa14.44□□□□□ -0.1
FOXA2-201ENST00000377115 IGLV8-61A0A075B6I0 122 aa14.43□□□□□ -0.1
FOXA2-201ENST00000377115 A8MUN3 132 aa14.43□□□□□ -0.1
FOXA2-201ENST00000377115 B9D2Q9BPU9 175 aa14.43□□□□□ -0.1
FOXA2-201ENST00000377115 A0A096LNI7 61 aa14.42□□□□□ -0.1
FOXA2-201ENST00000377115 SRRM2Q9UQ35 2752 aaKnown RBP14.4□□□□□ -0.1
FOXA2-201ENST00000377115 H0Y9P7 68 aa14.4□□□□□ -0.1
FOXA2-201ENST00000377115 UBE2AP49459 152 aa14.4□□□□□ -0.1
FOXA2-201ENST00000377115 CASC2Q6XLA1 102 aa14.39□□□□□ -0.11
FOXA2-201ENST00000377115 CNBPP62633 177 aaKnown RBP14.37□□□□□ -0.11
FOXA2-201ENST00000377115 MAST4O15021 2626 aa14.36□□□□□ -0.11
FOXA2-201ENST00000377115 A8MU10 97 aa14.34□□□□□ -0.11
FOXA2-201ENST00000377115 C16orf90A8MZG2 172 aa14.33□□□□□ -0.12
FOXA2-201ENST00000377115 DNAH3Q8TD57 4116 aa14.33□□□□□ -0.12
FOXA2-201ENST00000377115 Q5VV11 94 aa14.32□□□□□ -0.12
FOXA2-201ENST00000377115 KRTAP11-1Q8IUC1 163 aa14.32□□□□□ -0.12
FOXA2-201ENST00000377115 LYSTQ99698 3801 aa14.32□□□□□ -0.12
FOXA2-201ENST00000377115 SPANXA2-OT1Q8N9U9 137 aa14.31□□□□□ -0.12
FOXA2-201ENST00000377115 NOTCH1P46531 2555 aa14.31□□□□□ -0.12
FOXA2-201ENST00000377115 KMT2BQ9UMN6 2715 aaPredicted RBP14.3□□□□□ -0.12
FOXA2-201ENST00000377115 PMAIP1Q13794 54 aa14.3□□□□□ -0.12
FOXA2-201ENST00000377115 A8MWP4 228 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 SEC61GP60059 68 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 STAB1Q9NY15 2570 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 LINC00472Q9H8W2 130 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 H3BPC8 53 aa14.27□□□□□ -0.13
FOXA2-201ENST00000377115 PHF5AQ7RTV0 110 aaKnown RBP14.27□□□□□ -0.13
FOXA2-201ENST00000377115 Q8N9P0 234 aaPredicted RBP14.26□□□□□ -0.13
FOXA2-201ENST00000377115 CHTF8P0CG12 524 aa14.25□□□□□ -0.13
FOXA2-201ENST00000377115 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
FOXA2-201ENST00000377115 KRTAP1-5Q9BYS1 174 aa14.25□□□□□ -0.13
FOXA2-201ENST00000377115 FBN1P35555 2871 aaKnown RBP14.24□□□□□ -0.13
FOXA2-201ENST00000377115 HUWE1Q7Z6Z7 4374 aaKnown RBP14.24□□□□□ -0.13
FOXA2-201ENST00000377115 DNAH9Q9NYC9 4486 aa14.24□□□□□ -0.13
FOXA2-201ENST00000377115 CSMD3Q7Z407 3707 aa14.23□□□□□ -0.13
FOXA2-201ENST00000377115 H0Y9J4 135 aa14.21□□□□□ -0.14
FOXA2-201ENST00000377115 SPRR1BP22528 89 aa14.21□□□□□ -0.14
FOXA2-201ENST00000377115 CHKB-CPT1BH3BT56 60 aa14.2□□□□□ -0.14
FOXA2-201ENST00000377115 PRR15LQ9BU68 103 aa14.19□□□□□ -0.14
FOXA2-201ENST00000377115 MMP24-AS1A0A0U1RRL7 71 aa14.19□□□□□ -0.14
FOXA2-201ENST00000377115 LIMD2Q9BT23 127 aa14.17□□□□□ -0.14
FOXA2-201ENST00000377115 NBEAL1Q6ZS30 2694 aa14.17□□□□□ -0.14
FOXA2-201ENST00000377115 COL6A5A8TX70 2615 aa14.15□□□□□ -0.14
FOXA2-201ENST00000377115 KRTAP24-1Q3LI83 254 aa14.14□□□□□ -0.15
FOXA2-201ENST00000377115 COA5Q86WW8 74 aa14.13□□□□□ -0.15
FOXA2-201ENST00000377115 TENM2Q9NT68 2774 aa14.11□□□□□ -0.15
FOXA2-201ENST00000377115 PCOTHQ58A44 107 aa14.1□□□□□ -0.15
FOXA2-201ENST00000377115 IGLV7-46A0A075B6I9 117 aa14.09□□□□□ -0.15
FOXA2-201ENST00000377115 CD164Q04900 197 aa14.04□□□□□ -0.16
FOXA2-201ENST00000377115 Q96NJ1 140 aa14.04□□□□□ -0.16
FOXA2-201ENST00000377115 LCA10Q71F78 164 aa14.03□□□□□ -0.16
FOXA2-201ENST00000377115 Q75L30 129 aa14.03□□□□□ -0.16
FOXA2-201ENST00000377115 COL7A1Q02388 2944 aa14.03□□□□□ -0.16
FOXA2-201ENST00000377115 SPTSSBQ8NFR3 76 aa14.01□□□□□ -0.17
FOXA2-201ENST00000377115 IGLV9-49A0A0B4J1Y8 123 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 LOC101927531A0A1B0GV80 90 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 A6NED7 52 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 PANO1I0J062 215 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 ASB16-AS1Q495Z4 193 aa13.99□□□□□ -0.17
FOXA2-201ENST00000377115 KRTAP13-1Q8IUC0 172 aa13.98□□□□□ -0.17
FOXA2-201ENST00000377115 K7EIL1 84 aa13.97□□□□□ -0.17
FOXA2-201ENST00000377115 C14orf177Q52M58 125 aa13.96□□□□□ -0.17
FOXA2-201ENST00000377115 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
FOXA2-201ENST00000377115 DNAH7Q8WXX0 4024 aa13.96□□□□□ -0.18
FOXA2-201ENST00000377115 C8orf17Q9NRJ1 99 aa13.95□□□□□ -0.18
FOXA2-201ENST00000377115 MOBPQ13875 183 aa13.95□□□□□ -0.18
FOXA2-201ENST00000377115 TP53AIP1Q9HCN2 124 aa13.95□□□□□ -0.18
FOXA2-201ENST00000377115 STAB2Q8WWQ8 2551 aa13.94□□□□□ -0.18
FOXA2-201ENST00000377115 SPAG11AQ6PDA7 123 aa13.93□□□□□ -0.18
FOXA2-201ENST00000377115 NDUFS5O43920 106 aa13.92□□□□□ -0.18
FOXA2-201ENST00000377115 Q6ZR54 194 aa13.92□□□□□ -0.18
FOXA2-201ENST00000377115 IGHV6-1A0A0B4J1U7 121 aa13.91□□□□□ -0.18
FOXA2-201ENST00000377115 ATP11AUNQ6ZP68 121 aa13.89□□□□□ -0.19
FOXA2-201ENST00000377115 KTN1-AS1Q86SY8 53 aa13.86□□□□□ -0.19
FOXA2-201ENST00000377115 LINC01558Q9Y6Z2 57 aa13.86□□□□□ -0.19
FOXA2-201ENST00000377115 A0A1B0GVX0 72 aa13.85□□□□□ -0.19
FOXA2-201ENST00000377115 PLAC8Q9NZF1 115 aa13.85□□□□□ -0.19
FOXA2-201ENST00000377115 HRES1P13985 223 aa13.84□□□□□ -0.19
FOXA2-201ENST00000377115 CDC42SE1Q9NRR8 79 aa13.84□□□□□ -0.19
FOXA2-201ENST00000377115 APLNQ9ULZ1 77 aa13.84□□□□□ -0.19
FOXA2-201ENST00000377115 A0A087X002 238 aa13.82□□□□□ -0.2
FOXA2-201ENST00000377115 NOTCH2NLQ7Z3S9 236 aa13.82□□□□□ -0.2
FOXA2-201ENST00000377115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.81□□□□□ -0.2
FOXA2-201ENST00000377115 A6NN06 94 aa13.8□□□□□ -0.2
FOXA2-201ENST00000377115 MRPL34Q9BQ48 92 aaKnown RBP13.8□□□□□ -0.2
FOXA2-201ENST00000377115 LINC00483Q53H64 154 aa13.78□□□□□ -0.2
FOXA2-201ENST00000377115 FRAS1Q86XX4 4008 aa13.78□□□□□ -0.2
FOXA2-201ENST00000377115 CDK2AP2O75956 126 aa13.76□□□□□ -0.21
FOXA2-201ENST00000377115 ANAPC11Q9NYG5 84 aa13.76□□□□□ -0.21
FOXA2-201ENST00000377115 PLECQ15149 4684 aaKnown RBP13.76□□□□□ -0.21
FOXA2-201ENST00000377115 SPINK7P58062 85 aa13.76□□□□□ -0.21
FOXA2-201ENST00000377115 DYNC2H1Q8NCM8 4307 aaKnown RBP13.75□□□□□ -0.21
FOXA2-201ENST00000377115 WWC2-AS2Q96NR7 200 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms