RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 NDUFB1O75438 58 aa14.5□□□□□ -0.09
FOXA2-201ENST00000377115 MP68P56378 58 aa14.49□□□□□ -0.09
FOXA2-201ENST00000377115 LINC00208Q96KT6 92 aa14.49□□□□□ -0.09
FOXA2-201ENST00000377115 V9GYY9 64 aa14.49□□□□□ -0.09
FOXA2-201ENST00000377115 CMYA5Q8N3K9 4069 aa14.46□□□□□ -0.09
FOXA2-201ENST00000377115 KRTAP29-1A8MX34 341 aaPredicted RBP14.44□□□□□ -0.1
FOXA2-201ENST00000377115 IGKV2-24A0A0C4DH68 120 aa14.44□□□□□ -0.1
FOXA2-201ENST00000377115 DNAH10Q8IVF4 4471 aa14.44□□□□□ -0.1
FOXA2-201ENST00000377115 IGLV8-61A0A075B6I0 122 aa14.43□□□□□ -0.1
FOXA2-201ENST00000377115 A8MUN3 132 aa14.43□□□□□ -0.1
FOXA2-201ENST00000377115 B9D2Q9BPU9 175 aa14.43□□□□□ -0.1
FOXA2-201ENST00000377115 A0A096LNI7 61 aa14.42□□□□□ -0.1
FOXA2-201ENST00000377115 SRRM2Q9UQ35 2752 aaKnown RBP14.4□□□□□ -0.1
FOXA2-201ENST00000377115 H0Y9P7 68 aa14.4□□□□□ -0.1
FOXA2-201ENST00000377115 UBE2AP49459 152 aa14.4□□□□□ -0.1
FOXA2-201ENST00000377115 CASC2Q6XLA1 102 aa14.39□□□□□ -0.11
FOXA2-201ENST00000377115 CNBPP62633 177 aaKnown RBP14.37□□□□□ -0.11
FOXA2-201ENST00000377115 MAST4O15021 2626 aa14.36□□□□□ -0.11
FOXA2-201ENST00000377115 A8MU10 97 aa14.34□□□□□ -0.11
FOXA2-201ENST00000377115 C16orf90A8MZG2 172 aa14.33□□□□□ -0.12
FOXA2-201ENST00000377115 DNAH3Q8TD57 4116 aa14.33□□□□□ -0.12
FOXA2-201ENST00000377115 Q5VV11 94 aa14.32□□□□□ -0.12
FOXA2-201ENST00000377115 KRTAP11-1Q8IUC1 163 aa14.32□□□□□ -0.12
FOXA2-201ENST00000377115 LYSTQ99698 3801 aa14.32□□□□□ -0.12
FOXA2-201ENST00000377115 SPANXA2-OT1Q8N9U9 137 aa14.31□□□□□ -0.12
FOXA2-201ENST00000377115 NOTCH1P46531 2555 aa14.31□□□□□ -0.12
FOXA2-201ENST00000377115 KMT2BQ9UMN6 2715 aaPredicted RBP14.3□□□□□ -0.12
FOXA2-201ENST00000377115 PMAIP1Q13794 54 aa14.3□□□□□ -0.12
FOXA2-201ENST00000377115 A8MWP4 228 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 SEC61GP60059 68 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 STAB1Q9NY15 2570 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 LINC00472Q9H8W2 130 aa14.29□□□□□ -0.12
FOXA2-201ENST00000377115 H3BPC8 53 aa14.27□□□□□ -0.13
FOXA2-201ENST00000377115 PHF5AQ7RTV0 110 aaKnown RBP14.27□□□□□ -0.13
FOXA2-201ENST00000377115 Q8N9P0 234 aaPredicted RBP14.26□□□□□ -0.13
FOXA2-201ENST00000377115 CHTF8P0CG12 524 aa14.25□□□□□ -0.13
FOXA2-201ENST00000377115 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
FOXA2-201ENST00000377115 KRTAP1-5Q9BYS1 174 aa14.25□□□□□ -0.13
FOXA2-201ENST00000377115 FBN1P35555 2871 aaKnown RBP14.24□□□□□ -0.13
FOXA2-201ENST00000377115 HUWE1Q7Z6Z7 4374 aaKnown RBP14.24□□□□□ -0.13
FOXA2-201ENST00000377115 DNAH9Q9NYC9 4486 aa14.24□□□□□ -0.13
FOXA2-201ENST00000377115 CSMD3Q7Z407 3707 aa14.23□□□□□ -0.13
FOXA2-201ENST00000377115 H0Y9J4 135 aa14.21□□□□□ -0.14
FOXA2-201ENST00000377115 SPRR1BP22528 89 aa14.21□□□□□ -0.14
FOXA2-201ENST00000377115 CHKB-CPT1BH3BT56 60 aa14.2□□□□□ -0.14
FOXA2-201ENST00000377115 PRR15LQ9BU68 103 aa14.19□□□□□ -0.14
FOXA2-201ENST00000377115 MMP24-AS1A0A0U1RRL7 71 aa14.19□□□□□ -0.14
FOXA2-201ENST00000377115 LIMD2Q9BT23 127 aa14.17□□□□□ -0.14
FOXA2-201ENST00000377115 NBEAL1Q6ZS30 2694 aa14.17□□□□□ -0.14
FOXA2-201ENST00000377115 COL6A5A8TX70 2615 aa14.15□□□□□ -0.14
FOXA2-201ENST00000377115 KRTAP24-1Q3LI83 254 aa14.14□□□□□ -0.15
FOXA2-201ENST00000377115 COA5Q86WW8 74 aa14.13□□□□□ -0.15
FOXA2-201ENST00000377115 TENM2Q9NT68 2774 aa14.11□□□□□ -0.15
FOXA2-201ENST00000377115 PCOTHQ58A44 107 aa14.1□□□□□ -0.15
FOXA2-201ENST00000377115 IGLV7-46A0A075B6I9 117 aa14.09□□□□□ -0.15
FOXA2-201ENST00000377115 CD164Q04900 197 aa14.04□□□□□ -0.16
FOXA2-201ENST00000377115 Q96NJ1 140 aa14.04□□□□□ -0.16
FOXA2-201ENST00000377115 LCA10Q71F78 164 aa14.03□□□□□ -0.16
FOXA2-201ENST00000377115 Q75L30 129 aa14.03□□□□□ -0.16
FOXA2-201ENST00000377115 COL7A1Q02388 2944 aa14.03□□□□□ -0.16
FOXA2-201ENST00000377115 SPTSSBQ8NFR3 76 aa14.01□□□□□ -0.17
FOXA2-201ENST00000377115 IGLV9-49A0A0B4J1Y8 123 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 LOC101927531A0A1B0GV80 90 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 A6NED7 52 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 PANO1I0J062 215 aa14□□□□□ -0.17
FOXA2-201ENST00000377115 ASB16-AS1Q495Z4 193 aa13.99□□□□□ -0.17
FOXA2-201ENST00000377115 KRTAP13-1Q8IUC0 172 aa13.98□□□□□ -0.17
FOXA2-201ENST00000377115 K7EIL1 84 aa13.97□□□□□ -0.17
FOXA2-201ENST00000377115 C14orf177Q52M58 125 aa13.96□□□□□ -0.17
FOXA2-201ENST00000377115 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
FOXA2-201ENST00000377115 DNAH7Q8WXX0 4024 aa13.96□□□□□ -0.18
FOXA2-201ENST00000377115 C8orf17Q9NRJ1 99 aa13.95□□□□□ -0.18
FOXA2-201ENST00000377115 MOBPQ13875 183 aa13.95□□□□□ -0.18
FOXA2-201ENST00000377115 TP53AIP1Q9HCN2 124 aa13.95□□□□□ -0.18
FOXA2-201ENST00000377115 STAB2Q8WWQ8 2551 aa13.94□□□□□ -0.18
FOXA2-201ENST00000377115 SPAG11AQ6PDA7 123 aa13.93□□□□□ -0.18
FOXA2-201ENST00000377115 NDUFS5O43920 106 aa13.92□□□□□ -0.18
FOXA2-201ENST00000377115 Q6ZR54 194 aa13.92□□□□□ -0.18
FOXA2-201ENST00000377115 IGHV6-1A0A0B4J1U7 121 aa13.91□□□□□ -0.18
FOXA2-201ENST00000377115 ATP11AUNQ6ZP68 121 aa13.89□□□□□ -0.19
FOXA2-201ENST00000377115 KTN1-AS1Q86SY8 53 aa13.86□□□□□ -0.19
FOXA2-201ENST00000377115 LINC01558Q9Y6Z2 57 aa13.86□□□□□ -0.19
FOXA2-201ENST00000377115 A0A1B0GVX0 72 aa13.85□□□□□ -0.19
FOXA2-201ENST00000377115 PLAC8Q9NZF1 115 aa13.85□□□□□ -0.19
FOXA2-201ENST00000377115 HRES1P13985 223 aa13.84□□□□□ -0.19
FOXA2-201ENST00000377115 CDC42SE1Q9NRR8 79 aa13.84□□□□□ -0.19
FOXA2-201ENST00000377115 APLNQ9ULZ1 77 aa13.84□□□□□ -0.19
FOXA2-201ENST00000377115 A0A087X002 238 aa13.82□□□□□ -0.2
FOXA2-201ENST00000377115 NOTCH2NLQ7Z3S9 236 aa13.82□□□□□ -0.2
FOXA2-201ENST00000377115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.81□□□□□ -0.2
FOXA2-201ENST00000377115 A6NN06 94 aa13.8□□□□□ -0.2
FOXA2-201ENST00000377115 MRPL34Q9BQ48 92 aaKnown RBP13.8□□□□□ -0.2
FOXA2-201ENST00000377115 LINC00483Q53H64 154 aa13.78□□□□□ -0.2
FOXA2-201ENST00000377115 FRAS1Q86XX4 4008 aa13.78□□□□□ -0.2
FOXA2-201ENST00000377115 CDK2AP2O75956 126 aa13.76□□□□□ -0.21
FOXA2-201ENST00000377115 ANAPC11Q9NYG5 84 aa13.76□□□□□ -0.21
FOXA2-201ENST00000377115 PLECQ15149 4684 aaKnown RBP13.76□□□□□ -0.21
FOXA2-201ENST00000377115 SPINK7P58062 85 aa13.76□□□□□ -0.21
FOXA2-201ENST00000377115 DYNC2H1Q8NCM8 4307 aaKnown RBP13.75□□□□□ -0.21
FOXA2-201ENST00000377115 WWC2-AS2Q96NR7 200 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms