RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
NPLOC4-202ENST00000374747 Q6ZRP5 223 aa8.22□□□□□ -1.09
NPLOC4-202ENST00000374747 NBPF19A0A087WUL8 3843 aa8.22□□□□□ -1.09
NPLOC4-202ENST00000374747 LINC01600Q96MT4 127 aa8.21□□□□□ -1.1
NPLOC4-202ENST00000374747 FAM229AH3BQW9 127 aa8.21□□□□□ -1.1
NPLOC4-202ENST00000374747 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-202ENST00000374747 GIG44P09565 113 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-202ENST00000374747 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
NPLOC4-202ENST00000374747 UQCR11O14957 56 aa8.19□□□□□ -1.1
NPLOC4-202ENST00000374747 KRTAP10-11P60412 298 aa8.19□□□□□ -1.1
NPLOC4-202ENST00000374747 AKAP9Q99996 3911 aa8.19□□□□□ -1.1
NPLOC4-202ENST00000374747 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
NPLOC4-202ENST00000374747 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
NPLOC4-202ENST00000374747 RTL8CO15255 209 aa8.17□□□□□ -1.1
NPLOC4-202ENST00000374747 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
NPLOC4-202ENST00000374747 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
NPLOC4-202ENST00000374747 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
NPLOC4-202ENST00000374747 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
NPLOC4-202ENST00000374747 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
NPLOC4-202ENST00000374747 MAST4O15021 2626 aa8.16□□□□□ -1.1
NPLOC4-202ENST00000374747 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
NPLOC4-202ENST00000374747 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
NPLOC4-202ENST00000374747 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
NPLOC4-202ENST00000374747 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
NPLOC4-202ENST00000374747 K7EIL1 84 aa8.15□□□□□ -1.1
NPLOC4-202ENST00000374747 LINC00336Q6ZUF6 198 aa8.15□□□□□ -1.11
NPLOC4-202ENST00000374747 Q96NJ1 140 aa8.15□□□□□ -1.11
NPLOC4-202ENST00000374747 NSD1Q96L73 2696 aaPredicted RBP8.15□□□□□ -1.11
NPLOC4-202ENST00000374747 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.11
NPLOC4-202ENST00000374747 FAM168BA1KXE4 195 aa8.14□□□□□ -1.11
NPLOC4-202ENST00000374747 DNAH10OSP0CZ25 163 aa8.14□□□□□ -1.11
NPLOC4-202ENST00000374747 H7BZZ5 65 aa8.14□□□□□ -1.11
NPLOC4-202ENST00000374747 PRR15Q8IV56 129 aa8.13□□□□□ -1.11
NPLOC4-202ENST00000374747 CR1P17927 2039 aa8.13□□□□□ -1.11
NPLOC4-202ENST00000374747 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
NPLOC4-202ENST00000374747 FBN1P35555 2871 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-202ENST00000374747 CD164Q04900 197 aa8.12□□□□□ -1.11
NPLOC4-202ENST00000374747 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
NPLOC4-202ENST00000374747 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-202ENST00000374747 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
NPLOC4-202ENST00000374747 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
NPLOC4-202ENST00000374747 COL6A5A8TX70 2615 aa8.08□□□□□ -1.12
NPLOC4-202ENST00000374747 Q8N377 158 aa8.07□□□□□ -1.12
NPLOC4-202ENST00000374747 KTN1-AS1Q86SY8 53 aa8.07□□□□□ -1.12
NPLOC4-202ENST00000374747 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
NPLOC4-202ENST00000374747 PRR34Q9NV39 138 aa8.06□□□□□ -1.12
NPLOC4-202ENST00000374747 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
NPLOC4-202ENST00000374747 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
NPLOC4-202ENST00000374747 MGAM2Q2M2H8 2515 aa8.04□□□□□ -1.12
NPLOC4-202ENST00000374747 DSCR10P59022 87 aa8.04□□□□□ -1.12
NPLOC4-202ENST00000374747 LCA10Q71F78 164 aa8.03□□□□□ -1.12
NPLOC4-202ENST00000374747 C15orf56Q8N910 161 aa8.03□□□□□ -1.12
NPLOC4-202ENST00000374747 BAHCC1Q9P281 2608 aa8.03□□□□□ -1.12
NPLOC4-202ENST00000374747 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-202ENST00000374747 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
NPLOC4-202ENST00000374747 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
NPLOC4-202ENST00000374747 APLNQ9ULZ1 77 aa8□□□□□ -1.13
NPLOC4-202ENST00000374747 SPANXA2-OT1Q8N9U9 137 aa8□□□□□ -1.13
NPLOC4-202ENST00000374747 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
NPLOC4-202ENST00000374747 WIPF1O43516 503 aa7.99□□□□□ -1.13
NPLOC4-202ENST00000374747 TLX1NBP0CAT3 122 aa7.98□□□□□ -1.13
NPLOC4-202ENST00000374747 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
NPLOC4-202ENST00000374747 A0A1W2PNN7 141 aa7.98□□□□□ -1.13
NPLOC4-202ENST00000374747 ZNF861PO60384 105 aa7.97□□□□□ -1.13
NPLOC4-202ENST00000374747 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
NPLOC4-202ENST00000374747 A0A1W2PNM2 257 aa7.95□□□□□ -1.14
NPLOC4-202ENST00000374747 OBSCN-AS1Q96MR7 158 aa7.95□□□□□ -1.14
NPLOC4-202ENST00000374747 LINC00304Q8N9R0 145 aa7.92□□□□□ -1.14
NPLOC4-202ENST00000374747 C9orf163Q8N9P6 203 aa7.89□□□□□ -1.15
NPLOC4-202ENST00000374747 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
NPLOC4-202ENST00000374747 Q1T7F1 81 aa7.89□□□□□ -1.15
NPLOC4-202ENST00000374747 STAB2Q8WWQ8 2551 aa7.88□□□□□ -1.15
NPLOC4-202ENST00000374747 OCR1Q9BZK8 76 aa7.88□□□□□ -1.15
NPLOC4-202ENST00000374747 TENM2Q9NT68 2774 aa7.88□□□□□ -1.15
NPLOC4-202ENST00000374747 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
NPLOC4-202ENST00000374747 SPRR4Q96PI1 79 aa7.86□□□□□ -1.15
NPLOC4-202ENST00000374747 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
NPLOC4-202ENST00000374747 A0A087WTM6 91 aa7.85□□□□□ -1.15
NPLOC4-202ENST00000374747 IGLV7-43P04211 117 aa7.83□□□□□ -1.16
NPLOC4-202ENST00000374747 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
NPLOC4-202ENST00000374747 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
NPLOC4-202ENST00000374747 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
NPLOC4-202ENST00000374747 KMT2BQ9UMN6 2715 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-202ENST00000374747 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
NPLOC4-202ENST00000374747 Q8N1X5 172 aa7.81□□□□□ -1.16
NPLOC4-202ENST00000374747 A0A0D9SG42 100 aa7.8□□□□□ -1.16
NPLOC4-202ENST00000374747 PRR26Q8N8Z3 221 aa7.8□□□□□ -1.16
NPLOC4-202ENST00000374747 CASC10Q5T4H9 136 aa7.8□□□□□ -1.16
NPLOC4-202ENST00000374747 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
NPLOC4-202ENST00000374747 Q75L30 129 aa7.76□□□□□ -1.17
NPLOC4-202ENST00000374747 J3QL48 77 aa7.76□□□□□ -1.17
NPLOC4-202ENST00000374747 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
NPLOC4-202ENST00000374747 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
NPLOC4-202ENST00000374747 ANK3Q12955 4377 aaKnown RBP7.73□□□□□ -1.17
NPLOC4-202ENST00000374747 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
NPLOC4-202ENST00000374747 Q5XG85 94 aa7.72□□□□□ -1.17
NPLOC4-202ENST00000374747 SRRM2Q9UQ35 2752 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-202ENST00000374747 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
NPLOC4-202ENST00000374747 HRES1P13985 223 aa7.68□□□□□ -1.18
NPLOC4-202ENST00000374747 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms