RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 DEFB131BA0A096LNP1 70 aa10.7□□□□□ -0.7
DKC1-201ENST00000369550 UBE2AP49459 152 aa10.7□□□□□ -0.7
DKC1-201ENST00000369550 CASC10Q5T4H9 136 aa10.7□□□□□ -0.7
DKC1-201ENST00000369550 CASC2Q6XLA1 102 aa10.7□□□□□ -0.7
DKC1-201ENST00000369550 PRR15LQ9BU68 103 aa10.7□□□□□ -0.7
DKC1-201ENST00000369550 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
DKC1-201ENST00000369550 LIMD2Q9BT23 127 aa10.69□□□□□ -0.7
DKC1-201ENST00000369550 BAHCC1Q9P281 2608 aa10.69□□□□□ -0.7
DKC1-201ENST00000369550 Q8N9P0 234 aaPredicted RBP10.69□□□□□ -0.7
DKC1-201ENST00000369550 PRLHP81277 87 aa10.67□□□□□ -0.7
DKC1-201ENST00000369550 KRTAP29-1A8MX34 341 aaPredicted RBP10.67□□□□□ -0.7
DKC1-201ENST00000369550 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
DKC1-201ENST00000369550 SPTSSBQ8NFR3 76 aa10.66□□□□□ -0.7
DKC1-201ENST00000369550 H3BPC8 53 aa10.65□□□□□ -0.7
DKC1-201ENST00000369550 KRTAP24-1Q3LI83 254 aa10.65□□□□□ -0.7
DKC1-201ENST00000369550 OXLD1Q5BKU9 147 aa10.65□□□□□ -0.71
DKC1-201ENST00000369550 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
DKC1-201ENST00000369550 KRTAP10-11P60412 298 aa10.62□□□□□ -0.71
DKC1-201ENST00000369550 CD164Q04900 197 aa10.62□□□□□ -0.71
DKC1-201ENST00000369550 C11orf45Q8TAV5 145 aa10.62□□□□□ -0.71
DKC1-201ENST00000369550 CNBPP62633 177 aaKnown RBP10.61□□□□□ -0.71
DKC1-201ENST00000369550 TENM3Q9P273 2699 aa10.6□□□□□ -0.71
DKC1-201ENST00000369550 IGLV8-61A0A075B6I0 122 aa10.6□□□□□ -0.71
DKC1-201ENST00000369550 A6NED7 52 aa10.59□□□□□ -0.71
DKC1-201ENST00000369550 IGKV2-24A0A0C4DH68 120 aa10.58□□□□□ -0.72
DKC1-201ENST00000369550 A8MWP4 228 aa10.58□□□□□ -0.72
DKC1-201ENST00000369550 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
DKC1-201ENST00000369550 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
DKC1-201ENST00000369550 LINC00588Q9Y4M8 146 aa10.57□□□□□ -0.72
DKC1-201ENST00000369550 COA5Q86WW8 74 aa10.57□□□□□ -0.72
DKC1-201ENST00000369550 H0Y9J4 135 aa10.56□□□□□ -0.72
DKC1-201ENST00000369550 KTN1-AS1Q86SY8 53 aa10.56□□□□□ -0.72
DKC1-201ENST00000369550 Q75L30 129 aa10.55□□□□□ -0.72
DKC1-201ENST00000369550 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
DKC1-201ENST00000369550 LCA10Q71F78 164 aa10.54□□□□□ -0.72
DKC1-201ENST00000369550 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
DKC1-201ENST00000369550 LINC00472Q9H8W2 130 aa10.52□□□□□ -0.73
DKC1-201ENST00000369550 A0A096LNI7 61 aa10.51□□□□□ -0.73
DKC1-201ENST00000369550 PCOTHQ58A44 107 aa10.51□□□□□ -0.73
DKC1-201ENST00000369550 CMYA5Q8N3K9 4069 aa10.51□□□□□ -0.73
DKC1-201ENST00000369550 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
DKC1-201ENST00000369550 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
DKC1-201ENST00000369550 LOC101927531A0A1B0GV80 90 aa10.5□□□□□ -0.73
DKC1-201ENST00000369550 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
DKC1-201ENST00000369550 ANK2Q01484 3957 aa10.47□□□□□ -0.73
DKC1-201ENST00000369550 MMP24-AS1A0A0U1RRL7 71 aa10.46□□□□□ -0.73
DKC1-201ENST00000369550 SPAG11AQ6PDA7 123 aa10.46□□□□□ -0.74
DKC1-201ENST00000369550 RBM12B-AS1Q9P1G2 102 aa10.45□□□□□ -0.74
DKC1-201ENST00000369550 CDC42SE1Q9NRR8 79 aa10.44□□□□□ -0.74
DKC1-201ENST00000369550 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
DKC1-201ENST00000369550 NDUFS5O43920 106 aa10.42□□□□□ -0.74
DKC1-201ENST00000369550 A6NN06 94 aa10.41□□□□□ -0.74
DKC1-201ENST00000369550 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
DKC1-201ENST00000369550 SPRR1BP22528 89 aa10.4□□□□□ -0.74
DKC1-201ENST00000369550 MAST4O15021 2626 aa10.4□□□□□ -0.74
DKC1-201ENST00000369550 KRTAP11-1Q8IUC1 163 aa10.4□□□□□ -0.74
DKC1-201ENST00000369550 TP53AIP1Q9HCN2 124 aa10.38□□□□□ -0.75
DKC1-201ENST00000369550 LINC01558Q9Y6Z2 57 aa10.38□□□□□ -0.75
DKC1-201ENST00000369550 CHTF8P0CG12 524 aa10.37□□□□□ -0.75
DKC1-201ENST00000369550 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
DKC1-201ENST00000369550 MOBPQ13875 183 aa10.33□□□□□ -0.76
DKC1-201ENST00000369550 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
DKC1-201ENST00000369550 COL6A5A8TX70 2615 aa10.31□□□□□ -0.76
DKC1-201ENST00000369550 IGLV9-49A0A0B4J1Y8 123 aa10.31□□□□□ -0.76
DKC1-201ENST00000369550 SPINK7P58062 85 aa10.31□□□□□ -0.76
DKC1-201ENST00000369550 C8orf17Q9NRJ1 99 aa10.3□□□□□ -0.76
DKC1-201ENST00000369550 PLAC8Q9NZF1 115 aa10.3□□□□□ -0.76
DKC1-201ENST00000369550 HRES1P13985 223 aa10.3□□□□□ -0.76
DKC1-201ENST00000369550 Q6ZR54 194 aa10.3□□□□□ -0.76
DKC1-201ENST00000369550 TENM2Q9NT68 2774 aa10.3□□□□□ -0.76
DKC1-201ENST00000369550 NOTCH1P46531 2555 aa10.3□□□□□ -0.76
DKC1-201ENST00000369550 IGHV6-1A0A0B4J1U7 121 aa10.29□□□□□ -0.76
DKC1-201ENST00000369550 K7EIL1 84 aa10.29□□□□□ -0.76
DKC1-201ENST00000369550 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
DKC1-201ENST00000369550 ASB16-AS1Q495Z4 193 aa10.28□□□□□ -0.76
DKC1-201ENST00000369550 Q96NJ1 140 aa10.28□□□□□ -0.76
DKC1-201ENST00000369550 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
DKC1-201ENST00000369550 CDK2AP2O75956 126 aa10.25□□□□□ -0.77
DKC1-201ENST00000369550 DNAH10Q8IVF4 4471 aa10.24□□□□□ -0.77
DKC1-201ENST00000369550 NBEAL1Q6ZS30 2694 aa10.23□□□□□ -0.77
DKC1-201ENST00000369550 A0A1B0GVX0 72 aa10.22□□□□□ -0.77
DKC1-201ENST00000369550 C14orf177Q52M58 125 aa10.21□□□□□ -0.78
DKC1-201ENST00000369550 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.78
DKC1-201ENST00000369550 HUWE1Q7Z6Z7 4374 aaKnown RBP10.19□□□□□ -0.78
DKC1-201ENST00000369550 COL7A1Q02388 2944 aa10.19□□□□□ -0.78
DKC1-201ENST00000369550 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
DKC1-201ENST00000369550 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
DKC1-201ENST00000369550 LYSTQ99698 3801 aa10.16□□□□□ -0.78
DKC1-201ENST00000369550 KRTAP13-1Q8IUC0 172 aa10.16□□□□□ -0.78
DKC1-201ENST00000369550 A0A087X002 238 aa10.14□□□□□ -0.79
DKC1-201ENST00000369550 NOTCH2NLQ7Z3S9 236 aa10.14□□□□□ -0.79
DKC1-201ENST00000369550 PANO1I0J062 215 aa10.13□□□□□ -0.79
DKC1-201ENST00000369550 MDFIQ99750 246 aa10.12□□□□□ -0.79
DKC1-201ENST00000369550 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
DKC1-201ENST00000369550 LINC00313P59037 77 aa10.09□□□□□ -0.79
DKC1-201ENST00000369550 ACYP2P14621 99 aa10.07□□□□□ -0.8
DKC1-201ENST00000369550 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
DKC1-201ENST00000369550 LINC00483Q53H64 154 aa10.06□□□□□ -0.8
DKC1-201ENST00000369550 Q5W150 140 aa10.06□□□□□ -0.8
DKC1-201ENST00000369550 PRAC1Q96KF2 57 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms