RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
LYSMD1-201ENST00000368908 A8MUN3 132 aa6.72□□□□□ -1.33
LYSMD1-201ENST00000368908 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.33
LYSMD1-201ENST00000368908 UBE2BP63146 152 aa6.71□□□□□ -1.33
LYSMD1-201ENST00000368908 Q5VV11 94 aa6.71□□□□□ -1.33
LYSMD1-201ENST00000368908 LINC00476Q8WZB0 136 aa6.71□□□□□ -1.33
LYSMD1-201ENST00000368908 LIMD2Q9BT23 127 aa6.71□□□□□ -1.34
LYSMD1-201ENST00000368908 PRR4Q16378 134 aa6.7□□□□□ -1.34
LYSMD1-201ENST00000368908 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
LYSMD1-201ENST00000368908 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
LYSMD1-201ENST00000368908 UBE2AP49459 152 aa6.7□□□□□ -1.34
LYSMD1-201ENST00000368908 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
LYSMD1-201ENST00000368908 IGFL1Q6UW32 110 aa6.68□□□□□ -1.34
LYSMD1-201ENST00000368908 LINC00208Q96KT6 92 aa6.68□□□□□ -1.34
LYSMD1-201ENST00000368908 LYSTQ99698 3801 aa6.68□□□□□ -1.34
LYSMD1-201ENST00000368908 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
LYSMD1-201ENST00000368908 KRTAP7-1Q8IUC3 87 aa6.68□□□□□ -1.34
LYSMD1-201ENST00000368908 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
LYSMD1-201ENST00000368908 FAM168BA1KXE4 195 aa6.67□□□□□ -1.34
LYSMD1-201ENST00000368908 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
LYSMD1-201ENST00000368908 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
LYSMD1-201ENST00000368908 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
LYSMD1-201ENST00000368908 H0Y9P7 68 aa6.66□□□□□ -1.34
LYSMD1-201ENST00000368908 DNAH10OSP0CZ25 163 aa6.66□□□□□ -1.34
LYSMD1-201ENST00000368908 KRTAP10-11P60412 298 aa6.66□□□□□ -1.34
LYSMD1-201ENST00000368908 REG3GQ6UW15 175 aa6.66□□□□□ -1.34
LYSMD1-201ENST00000368908 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
LYSMD1-201ENST00000368908 HUWE1Q7Z6Z7 4374 aaKnown RBP6.64□□□□□ -1.35
LYSMD1-201ENST00000368908 MEGF8Q7Z7M0 2845 aa6.64□□□□□ -1.35
LYSMD1-201ENST00000368908 PRB2P02812 416 aaPredicted RBP6.64□□□□□ -1.35
LYSMD1-201ENST00000368908 Q75L30 129 aa6.64□□□□□ -1.35
LYSMD1-201ENST00000368908 A0A087WSZ3 146 aa6.63□□□□□ -1.35
LYSMD1-201ENST00000368908 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
LYSMD1-201ENST00000368908 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
LYSMD1-201ENST00000368908 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
LYSMD1-201ENST00000368908 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
LYSMD1-201ENST00000368908 STAB2Q8WWQ8 2551 aa6.62□□□□□ -1.35
LYSMD1-201ENST00000368908 KTN1-AS1Q86SY8 53 aa6.62□□□□□ -1.35
LYSMD1-201ENST00000368908 C16orf90A8MZG2 172 aa6.61□□□□□ -1.35
LYSMD1-201ENST00000368908 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
LYSMD1-201ENST00000368908 K7EIL1 84 aa6.61□□□□□ -1.35
LYSMD1-201ENST00000368908 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
LYSMD1-201ENST00000368908 TGP01266 2768 aa6.61□□□□□ -1.35
LYSMD1-201ENST00000368908 A8MWP4 228 aa6.6□□□□□ -1.35
LYSMD1-201ENST00000368908 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
LYSMD1-201ENST00000368908 ATP11AUNQ6ZP68 121 aa6.6□□□□□ -1.35
LYSMD1-201ENST00000368908 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
LYSMD1-201ENST00000368908 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
LYSMD1-201ENST00000368908 A8MU10 97 aa6.6□□□□□ -1.35
LYSMD1-201ENST00000368908 A0A0G2JQZ4 141 aa6.59□□□□□ -1.35
LYSMD1-201ENST00000368908 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
LYSMD1-201ENST00000368908 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
LYSMD1-201ENST00000368908 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
LYSMD1-201ENST00000368908 DEFB131BA0A096LNP1 70 aa6.58□□□□□ -1.36
LYSMD1-201ENST00000368908 COA5Q86WW8 74 aa6.58□□□□□ -1.36
LYSMD1-201ENST00000368908 NDUFS5O43920 106 aa6.57□□□□□ -1.36
LYSMD1-201ENST00000368908 LINC00472Q9H8W2 130 aa6.57□□□□□ -1.36
LYSMD1-201ENST00000368908 SPRR1BP22528 89 aa6.57□□□□□ -1.36
LYSMD1-201ENST00000368908 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
LYSMD1-201ENST00000368908 LCA10Q71F78 164 aa6.55□□□□□ -1.36
LYSMD1-201ENST00000368908 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
LYSMD1-201ENST00000368908 CDC42SE1Q9NRR8 79 aa6.55□□□□□ -1.36
LYSMD1-201ENST00000368908 A6NN06 94 aa6.54□□□□□ -1.36
LYSMD1-201ENST00000368908 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
LYSMD1-201ENST00000368908 MMP24-AS1A0A0U1RRL7 71 aa6.54□□□□□ -1.36
LYSMD1-201ENST00000368908 A6NED7 52 aa6.54□□□□□ -1.36
LYSMD1-201ENST00000368908 PRLHP81277 87 aa6.54□□□□□ -1.36
LYSMD1-201ENST00000368908 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
LYSMD1-201ENST00000368908 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
LYSMD1-201ENST00000368908 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
LYSMD1-201ENST00000368908 H0Y9J4 135 aa6.52□□□□□ -1.37
LYSMD1-201ENST00000368908 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
LYSMD1-201ENST00000368908 TP53AIP1Q9HCN2 124 aa6.51□□□□□ -1.37
LYSMD1-201ENST00000368908 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
LYSMD1-201ENST00000368908 RBM12B-AS1Q9P1G2 102 aa6.51□□□□□ -1.37
LYSMD1-201ENST00000368908 A0A096LNI7 61 aa6.49□□□□□ -1.37
LYSMD1-201ENST00000368908 J3QL48 77 aa6.49□□□□□ -1.37
LYSMD1-201ENST00000368908 MOBPQ13875 183 aa6.49□□□□□ -1.37
LYSMD1-201ENST00000368908 Q6ZR54 194 aa6.48□□□□□ -1.37
LYSMD1-201ENST00000368908 STARD9Q9P2P6 4700 aa6.48□□□□□ -1.37
LYSMD1-201ENST00000368908 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
LYSMD1-201ENST00000368908 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
LYSMD1-201ENST00000368908 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
LYSMD1-201ENST00000368908 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
LYSMD1-201ENST00000368908 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
LYSMD1-201ENST00000368908 IGKV2-24A0A0C4DH68 120 aa6.43□□□□□ -1.38
LYSMD1-201ENST00000368908 Q96NJ1 140 aa6.43□□□□□ -1.38
LYSMD1-201ENST00000368908 C8orf17Q9NRJ1 99 aa6.42□□□□□ -1.38
LYSMD1-201ENST00000368908 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
LYSMD1-201ENST00000368908 H3BS24 57 aa6.41□□□□□ -1.38
LYSMD1-201ENST00000368908 HRES1P13985 223 aa6.41□□□□□ -1.38
LYSMD1-201ENST00000368908 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
LYSMD1-201ENST00000368908 SPINK7P58062 85 aa6.38□□□□□ -1.39
LYSMD1-201ENST00000368908 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
LYSMD1-201ENST00000368908 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
LYSMD1-201ENST00000368908 WWC2-AS2Q96NR7 200 aa6.38□□□□□ -1.39
LYSMD1-201ENST00000368908 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
LYSMD1-201ENST00000368908 KMT2AQ03164 3969 aa6.36□□□□□ -1.39
LYSMD1-201ENST00000368908 DYNC2H1Q8NCM8 4307 aaKnown RBP6.36□□□□□ -1.39
LYSMD1-201ENST00000368908 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms