RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 H3BQF6 201 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 UBE2G1P62253 170 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 CCDC58Q4VC31 144 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 C10orf128Q5T292 105 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 MIC13Q5XKP0 118 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 RHPN1-AS1Q9BWJ2 59 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 TMEM191AQ9H0A3 160 aa-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 NXT2Q9NPJ8 142 aaKnown RBP-1.82□□□□□ -2.7
RNU4-28P-201ENST00000364739 ROCK2O75116 1388 aaKnown RBP-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 H0Y9P7 68 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 SPANXN1Q5VSR9 72 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 MRPL54Q6P161 138 aaKnown RBP-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 DYNLRB1Q9NP97 96 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 NFAT5O94916 1531 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 EHBP1L1Q8N3D4 1523 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 MRC2Q9UBG0 1479 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 SCN7AQ01118 1682 aa-1.83□□□□□ -2.7
RNU4-28P-201ENST00000364739 NESP48681 1621 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 ANKRD36BQ8N2N9 1353 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 MAP3K4Q9Y6R4 1608 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 CCL8P80075 99 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 NCBP2-AS2Q69YL0 99 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 ACBD7Q8N6N7 88 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 SEC11CQ9BY50 192 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 ABRACLQ9P1F3 81 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 C6orf48Q9UBA6 75 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 ARL2-SNX15V9GYD0 113 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 KIF20BQ96Q89 1820 aa-1.84□□□□□ -2.7
RNU4-28P-201ENST00000364739 TJP1Q07157 1748 aa-1.85□□□□□ -2.71
RNU4-28P-201ENST00000364739 NWD2Q9ULI1 1742 aa-1.85□□□□□ -2.71
RNU4-28P-201ENST00000364739 DEFB107AQ8IZN7 70 aa-1.85□□□□□ -2.71
RNU4-28P-201ENST00000364739 RABAC1Q9UI14 185 aa-1.85□□□□□ -2.71
RNU4-28P-201ENST00000364739 CCDC180Q9P1Z9 1646 aa-1.85□□□□□ -2.71
RNU4-28P-201ENST00000364739 DAPK1P53355 1430 aa-1.85□□□□□ -2.71
RNU4-28P-201ENST00000364739 NHSQ6T4R5 1651 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 TARBP1Q13395 1621 aaKnown RBP-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 IL5P05113 134 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 TAC4Q86UU9 113 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 DDA1Q9BW61 102 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 KAAG1Q9UBP8 84 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 SAMD9Q5K651 1589 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 CCNB3Q8WWL7 1395 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 DUOX2Q9NRD8 1548 aa-1.86□□□□□ -2.71
RNU4-28P-201ENST00000364739 SCRIBQ14160 1630 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 FAM24AA6NFZ4 105 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 CRYM-AS1A6NIL9 109 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 TSPAN19P0C672 248 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 HIST1H1AQ02539 215 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 SMIM21Q3B7S5 101 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 LINC01556Q5JQF7 62 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 KCNRGQ8N5I3 272 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 RRBP1Q9P2E9 1410 aaKnown RBP-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 PPLO60437 1756 aa-1.87□□□□□ -2.71
RNU4-28P-201ENST00000364739 CCDC88BA6NC98 1476 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 ADGRL2O95490 1459 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 ZNF518AQ6AHZ1 1483 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 OVOS2A0A0J9YW53 1432 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 OVOS2Q6IE36 1432 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 ANKARQ7Z5J8 1434 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 A0A096LNI7 61 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 TRAV13-2A0A0B4J235 113 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 C20orf78Q9BR46 151 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 UQCR10Q9UDW1 63 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 GINS2Q9Y248 185 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 FAM208AQ9UK61 1670 aaKnown RBP-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 ANKRD30AQ9BXX3 1397 aa-1.88□□□□□ -2.71
RNU4-28P-201ENST00000364739 MRPL33O75394 65 aaKnown RBP-1.89□□□□□ -2.71
RNU4-28P-201ENST00000364739 IGLC2P0DOY2 106 aa-1.89□□□□□ -2.71
RNU4-28P-201ENST00000364739 IGLC3P0DOY3 106 aa-1.89□□□□□ -2.71
RNU4-28P-201ENST00000364739 NCS1P62166 190 aa-1.89□□□□□ -2.71
RNU4-28P-201ENST00000364739 GAFA1Q96PS6 74 aa-1.89□□□□□ -2.71
RNU4-28P-201ENST00000364739 CC2D2AQ9P2K1 1620 aa-1.89□□□□□ -2.71
RNU4-28P-201ENST00000364739 C3P01024 1663 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 ITSN1Q15811 1721 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 DEFB121Q5J5C9 76 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 S100A7L2Q5SY68 101 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 CTAGE3PQ8IX95 158 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 VAMP8Q9BV40 100 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 HSPB11Q9Y547 144 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 IFT140Q96RY7 1462 aa-1.9□□□□□ -2.71
RNU4-28P-201ENST00000364739 MADDQ8WXG6 1647 aa-1.91□□□□□ -2.71
RNU4-28P-201ENST00000364739 DEFB131BA0A096LNP1 70 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 HSD52Q0P140 79 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 TDRG1Q3Y452 100 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 CCDC153Q494R4 210 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 DEFB124Q8NES8 71 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 C5P01031 1676 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 RGPD1P0DJD0 1748 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 FHAD1B1AJZ9 1412 aa-1.91□□□□□ -2.72
RNU4-28P-201ENST00000364739 PIGBOS1A0A0B4J2F0 54 aa-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 NAP1L6A6NFF2 107 aa-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 TRAPPC2P0DI81 140 aa-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 TRAPPC2BP0DI82 140 aa-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 SMIM15Q7Z3B0 74 aa-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 DDX60LQ5H9U9 1706 aaKnown RBP-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 ARAP2Q8WZ64 1704 aa-1.92□□□□□ -2.72
RNU4-28P-201ENST00000364739 FANCAO15360 1455 aa-1.93□□□□□ -2.72
RNU4-28P-201ENST00000364739 PZPP20742 1482 aa-1.93□□□□□ -2.72
RNU4-28P-201ENST00000364739 RAPGEF2Q9Y4G8 1499 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms