RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 IGLV5-48A0A075B6I7 105 aa10.5□□□□□ -0.73
SCAF1-201ENST00000360565 WIPF1O43516 503 aa10.49□□□□□ -0.73
SCAF1-201ENST00000360565 SPINK1P00995 79 aa10.49□□□□□ -0.73
SCAF1-201ENST00000360565 LIMD2Q9BT23 127 aa10.49□□□□□ -0.73
SCAF1-201ENST00000360565 PRR15Q8IV56 129 aa10.48□□□□□ -0.73
SCAF1-201ENST00000360565 FBN2P35556 2912 aa10.47□□□□□ -0.73
SCAF1-201ENST00000360565 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.74
SCAF1-201ENST00000360565 CRYBG3Q68DQ2 2970 aa10.45□□□□□ -0.74
SCAF1-201ENST00000360565 NIPBLQ6KC79 2804 aaeCLIP10.45□□□□□ -0.74
SCAF1-201ENST00000360565 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
SCAF1-201ENST00000360565 SPAG11AQ6PDA7 123 aa10.44□□□□□ -0.74
SCAF1-201ENST00000360565 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
SCAF1-201ENST00000360565 HIVEP1P15822 2718 aa10.43□□□□□ -0.74
SCAF1-201ENST00000360565 STAB2Q8WWQ8 2551 aa10.43□□□□□ -0.74
SCAF1-201ENST00000360565 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
SCAF1-201ENST00000360565 A0A087WTM6 91 aa10.42□□□□□ -0.74
SCAF1-201ENST00000360565 ANAPC11Q9NYG5 84 aa10.42□□□□□ -0.74
SCAF1-201ENST00000360565 DCHS2Q6V1P9 2916 aa10.41□□□□□ -0.74
SCAF1-201ENST00000360565 K7ERS5 55 aa10.4□□□□□ -0.74
SCAF1-201ENST00000360565 LINC00313P59037 77 aa10.39□□□□□ -0.75
SCAF1-201ENST00000360565 MRPL34Q9BQ48 92 aaKnown RBP10.39□□□□□ -0.75
SCAF1-201ENST00000360565 ZNF861PO60384 105 aa10.38□□□□□ -0.75
SCAF1-201ENST00000360565 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
SCAF1-201ENST00000360565 ACYP2P14621 99 aa10.37□□□□□ -0.75
SCAF1-201ENST00000360565 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
SCAF1-201ENST00000360565 A8MUN3 132 aa10.36□□□□□ -0.75
SCAF1-201ENST00000360565 OCR1Q9BZK8 76 aa10.36□□□□□ -0.75
SCAF1-201ENST00000360565 RELNP78509 3460 aa10.35□□□□□ -0.75
SCAF1-201ENST00000360565 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
SCAF1-201ENST00000360565 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
SCAF1-201ENST00000360565 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
SCAF1-201ENST00000360565 DSCR10P59022 87 aa10.33□□□□□ -0.76
SCAF1-201ENST00000360565 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
SCAF1-201ENST00000360565 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
SCAF1-201ENST00000360565 LOC101927531A0A1B0GV80 90 aa10.31□□□□□ -0.76
SCAF1-201ENST00000360565 COA5Q86WW8 74 aa10.31□□□□□ -0.76
SCAF1-201ENST00000360565 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
SCAF1-201ENST00000360565 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
SCAF1-201ENST00000360565 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
SCAF1-201ENST00000360565 A0A1B0GU69 56 aa10.29□□□□□ -0.76
SCAF1-201ENST00000360565 PLA2G1BP04054 148 aaKnown RBP10.28□□□□□ -0.76
SCAF1-201ENST00000360565 SPRR1AP35321 89 aa10.28□□□□□ -0.76
SCAF1-201ENST00000360565 MXRA5Q9NR99 2828 aa10.27□□□□□ -0.76
SCAF1-201ENST00000360565 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
SCAF1-201ENST00000360565 SSBP3-AS1Q7Z2R9 100 aa10.27□□□□□ -0.77
SCAF1-201ENST00000360565 C8orf87E5RJ46 101 aa10.26□□□□□ -0.77
SCAF1-201ENST00000360565 KMT2BQ9UMN6 2715 aaPredicted RBP10.26□□□□□ -0.77
SCAF1-201ENST00000360565 ZFHX4Q86UP3 3567 aa10.26□□□□□ -0.77
SCAF1-201ENST00000360565 IGLV7-43P04211 117 aa10.23□□□□□ -0.77
SCAF1-201ENST00000360565 Q96NJ1 140 aa10.23□□□□□ -0.77
SCAF1-201ENST00000360565 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
SCAF1-201ENST00000360565 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
SCAF1-201ENST00000360565 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
SCAF1-201ENST00000360565 CYP4F30PQ9H0H9 118 aa10.14□□□□□ -0.79
SCAF1-201ENST00000360565 SPANXA2-OT1Q8N9U9 137 aa10.13□□□□□ -0.79
SCAF1-201ENST00000360565 TNP2Q05952 138 aa10.12□□□□□ -0.79
SCAF1-201ENST00000360565 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
SCAF1-201ENST00000360565 SMR3BP02814 79 aaPredicted RBP10.09□□□□□ -0.79
SCAF1-201ENST00000360565 Q5XG85 94 aa10.08□□□□□ -0.8
SCAF1-201ENST00000360565 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
SCAF1-201ENST00000360565 KRTAP4-16G5E9R7 235 aaPredicted RBP10.04□□□□□ -0.8
SCAF1-201ENST00000360565 SPRR1BP22528 89 aa10.04□□□□□ -0.8
SCAF1-201ENST00000360565 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
SCAF1-201ENST00000360565 MMP24-AS1A0A0U1RRL7 71 aa10.03□□□□□ -0.8
SCAF1-201ENST00000360565 FP248Q71RG6 208 aaPredicted RBP10.03□□□□□ -0.8
SCAF1-201ENST00000360565 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.81
SCAF1-201ENST00000360565 LINC00472Q9H8W2 130 aa10.02□□□□□ -0.81
SCAF1-201ENST00000360565 OXTP01178 125 aa10.01□□□□□ -0.81
SCAF1-201ENST00000360565 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
SCAF1-201ENST00000360565 SMG1Q96Q15 3661 aaKnown RBP10□□□□□ -0.81
SCAF1-201ENST00000360565 C9orf92A6NGG3 77 aa9.99□□□□□ -0.81
SCAF1-201ENST00000360565 UQCR11O14957 56 aa9.98□□□□□ -0.81
SCAF1-201ENST00000360565 PLAC8Q9NZF1 115 aa9.98□□□□□ -0.81
SCAF1-201ENST00000360565 Q1T7F1 81 aa9.97□□□□□ -0.81
SCAF1-201ENST00000360565 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.81
SCAF1-201ENST00000360565 CELSR1Q9NYQ6 3014 aa9.94□□□□□ -0.82
SCAF1-201ENST00000360565 CD164Q04900 197 aa9.93□□□□□ -0.82
SCAF1-201ENST00000360565 PANO1I0J062 215 aa9.93□□□□□ -0.82
SCAF1-201ENST00000360565 Q8N1X5 172 aa9.9□□□□□ -0.83
SCAF1-201ENST00000360565 CSMD1Q96PZ7 3565 aa9.89□□□□□ -0.83
SCAF1-201ENST00000360565 MIR22HGQ0VDD5 57 aa9.88□□□□□ -0.83
SCAF1-201ENST00000360565 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
SCAF1-201ENST00000360565 HRES1P13985 223 aa9.86□□□□□ -0.83
SCAF1-201ENST00000360565 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
SCAF1-201ENST00000360565 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
SCAF1-201ENST00000360565 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
SCAF1-201ENST00000360565 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
SCAF1-201ENST00000360565 KRTAP11-1Q8IUC1 163 aa9.81□□□□□ -0.84
SCAF1-201ENST00000360565 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
SCAF1-201ENST00000360565 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
SCAF1-201ENST00000360565 TENM1Q9UKZ4 2725 aa9.77□□□□□ -0.85
SCAF1-201ENST00000360565 KTN1-AS1Q86SY8 53 aa9.76□□□□□ -0.85
SCAF1-201ENST00000360565 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
SCAF1-201ENST00000360565 Q75L30 129 aa9.73□□□□□ -0.85
SCAF1-201ENST00000360565 SVEP1Q4LDE5 3571 aa9.73□□□□□ -0.85
SCAF1-201ENST00000360565 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
SCAF1-201ENST00000360565 Q5W150 140 aa9.73□□□□□ -0.85
SCAF1-201ENST00000360565 LINC01558Q9Y6Z2 57 aa9.73□□□□□ -0.85
SCAF1-201ENST00000360565 Q5VV11 94 aa9.72□□□□□ -0.85
SCAF1-201ENST00000360565 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms