RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SPRR4Q96PI1 79 aa12.9□□□□□ -0.34
CBWD3-201ENST00000360171 A0A0U1RQV1 116 aa12.89□□□□□ -0.35
CBWD3-201ENST00000360171 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
CBWD3-201ENST00000360171 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
CBWD3-201ENST00000360171 DNAH6Q9C0G6 4158 aa12.88□□□□□ -0.35
CBWD3-201ENST00000360171 SMIM26A0A096LP01 95 aa12.87□□□□□ -0.35
CBWD3-201ENST00000360171 HRCT1Q6UXD1 115 aa12.87□□□□□ -0.35
CBWD3-201ENST00000360171 DNAH2Q9P225 4427 aa12.87□□□□□ -0.35
CBWD3-201ENST00000360171 MRPL55Q7Z7F7 128 aaKnown RBP12.87□□□□□ -0.35
CBWD3-201ENST00000360171 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-201ENST00000360171 CNBPP62633 177 aaKnown RBP12.86□□□□□ -0.35
CBWD3-201ENST00000360171 C14orf177Q52M58 125 aa12.85□□□□□ -0.35
CBWD3-201ENST00000360171 ST20-AS1Q8NBB2 130 aa12.84□□□□□ -0.35
CBWD3-201ENST00000360171 LCE6AA0A183 80 aa12.81□□□□□ -0.36
CBWD3-201ENST00000360171 REG3GQ6UW15 175 aa12.79□□□□□ -0.36
CBWD3-201ENST00000360171 UBE2BP63146 152 aa12.79□□□□□ -0.36
CBWD3-201ENST00000360171 SMIM29Q86T20 159 aa12.79□□□□□ -0.36
CBWD3-201ENST00000360171 A0A087WTM6 91 aa12.78□□□□□ -0.36
CBWD3-201ENST00000360171 C1orf134Q5TEV5 83 aa12.78□□□□□ -0.36
CBWD3-201ENST00000360171 FP248Q71RG6 208 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-201ENST00000360171 DSCR10P59022 87 aa12.76□□□□□ -0.37
CBWD3-201ENST00000360171 HYDINQ4G0P3 5121 aa12.75□□□□□ -0.37
CBWD3-201ENST00000360171 A0A096LNI7 61 aa12.75□□□□□ -0.37
CBWD3-201ENST00000360171 HIGD2AQ9BW72 106 aa12.74□□□□□ -0.37
CBWD3-201ENST00000360171 C9orf163Q8N9P6 203 aa12.73□□□□□ -0.37
CBWD3-201ENST00000360171 DNAH17Q9UFH2 4485 aa12.72□□□□□ -0.37
CBWD3-201ENST00000360171 FRAS1Q86XX4 4008 aa12.71□□□□□ -0.37
CBWD3-201ENST00000360171 C16orf90A8MZG2 172 aa12.71□□□□□ -0.37
CBWD3-201ENST00000360171 FAM30AQ9NZY2 134 aa12.71□□□□□ -0.37
CBWD3-201ENST00000360171 HECTD4Q9Y4D8 3996 aa12.71□□□□□ -0.37
CBWD3-201ENST00000360171 IGLV8-61A0A075B6I0 122 aa12.7□□□□□ -0.38
CBWD3-201ENST00000360171 IGKV2-24A0A0C4DH68 120 aa12.7□□□□□ -0.38
CBWD3-201ENST00000360171 K7EQZ3 153 aa12.69□□□□□ -0.38
CBWD3-201ENST00000360171 CHTF8P0CG12 524 aa12.68□□□□□ -0.38
CBWD3-201ENST00000360171 IGFL1Q6UW32 110 aa12.66□□□□□ -0.38
CBWD3-201ENST00000360171 ZCCHC13Q8WW36 166 aaKnown RBP12.66□□□□□ -0.38
CBWD3-201ENST00000360171 RTL8CO15255 209 aa12.66□□□□□ -0.38
CBWD3-201ENST00000360171 LINC00474Q9P2X8 69 aa12.65□□□□□ -0.38
CBWD3-201ENST00000360171 HCG22E2RYF7 251 aa12.64□□□□□ -0.39
CBWD3-201ENST00000360171 SACSQ9NZJ4 4579 aa12.64□□□□□ -0.39
CBWD3-201ENST00000360171 A0A1W2PNN7 141 aa12.64□□□□□ -0.39
CBWD3-201ENST00000360171 PANO1I0J062 215 aa12.62□□□□□ -0.39
CBWD3-201ENST00000360171 LINC00336Q6ZUF6 198 aa12.62□□□□□ -0.39
CBWD3-201ENST00000360171 PRO0628Q9UI54 55 aa12.61□□□□□ -0.39
CBWD3-201ENST00000360171 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
CBWD3-201ENST00000360171 PKIGQ9Y2B9 76 aa12.59□□□□□ -0.39
CBWD3-201ENST00000360171 PRLHP81277 87 aa12.58□□□□□ -0.4
CBWD3-201ENST00000360171 DNAH11Q96DT5 4516 aa12.58□□□□□ -0.4
CBWD3-201ENST00000360171 H0Y9J4 135 aa12.57□□□□□ -0.4
CBWD3-201ENST00000360171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-201ENST00000360171 IGLV5-52A0A0A0MRZ9 124 aa12.56□□□□□ -0.4
CBWD3-201ENST00000360171 SPRR1BP22528 89 aa12.56□□□□□ -0.4
CBWD3-201ENST00000360171 FAT2Q9NYQ8 4349 aa12.55□□□□□ -0.4
CBWD3-201ENST00000360171 A0A087WSZ3 146 aa12.54□□□□□ -0.4
CBWD3-201ENST00000360171 hDV103S1A0JD37 113 aa12.54□□□□□ -0.4
CBWD3-201ENST00000360171 SPACA4Q8TDM5 124 aa12.54□□□□□ -0.4
CBWD3-201ENST00000360171 A0A0G2JQZ4 141 aa12.53□□□□□ -0.4
CBWD3-201ENST00000360171 KRTAP10-2P60368 255 aa12.53□□□□□ -0.4
CBWD3-201ENST00000360171 UBE2AP49459 152 aa12.52□□□□□ -0.4
CBWD3-201ENST00000360171 PHF5AQ7RTV0 110 aaKnown RBP12.52□□□□□ -0.41
CBWD3-201ENST00000360171 DNAH5Q8TE73 4624 aa12.51□□□□□ -0.41
CBWD3-201ENST00000360171 PKD1P98161 4303 aa12.51□□□□□ -0.41
CBWD3-201ENST00000360171 NDUFB1O75438 58 aa12.5□□□□□ -0.41
CBWD3-201ENST00000360171 CYP4F30PQ9H0H9 118 aa12.5□□□□□ -0.41
CBWD3-201ENST00000360171 KRTAP29-1A8MX34 341 aaPredicted RBP12.49□□□□□ -0.41
CBWD3-201ENST00000360171 KRTAP11-1Q8IUC1 163 aa12.49□□□□□ -0.41
CBWD3-201ENST00000360171 MPLKIPQ8TAP9 179 aa12.47□□□□□ -0.41
CBWD3-201ENST00000360171 C1orf64Q8NEQ6 169 aa12.46□□□□□ -0.41
CBWD3-201ENST00000360171 MP68P56378 58 aa12.46□□□□□ -0.42
CBWD3-201ENST00000360171 DEFB116Q30KQ4 102 aa12.46□□□□□ -0.42
CBWD3-201ENST00000360171 WFDC13Q8IUB5 93 aa12.45□□□□□ -0.42
CBWD3-201ENST00000360171 PRR15Q8IV56 129 aa12.43□□□□□ -0.42
CBWD3-201ENST00000360171 RYR2Q92736 4967 aa12.43□□□□□ -0.42
CBWD3-201ENST00000360171 H3BPC8 53 aa12.43□□□□□ -0.42
CBWD3-201ENST00000360171 LINC00472Q9H8W2 130 aa12.42□□□□□ -0.42
CBWD3-201ENST00000360171 KMT2CQ8NEZ4 4911 aaKnown RBP12.42□□□□□ -0.42
CBWD3-201ENST00000360171 A8MWP4 228 aa12.41□□□□□ -0.42
CBWD3-201ENST00000360171 DNAH8Q96JB1 4490 aa12.41□□□□□ -0.42
CBWD3-201ENST00000360171 TRAV22A0A0B4J277 110 aa12.4□□□□□ -0.42
CBWD3-201ENST00000360171 Q1T7F1 81 aa12.4□□□□□ -0.42
CBWD3-201ENST00000360171 RPL37AP61513 92 aaKnown RBP12.39□□□□□ -0.43
CBWD3-201ENST00000360171 CASC2Q6XLA1 102 aa12.39□□□□□ -0.43
CBWD3-201ENST00000360171 PLAC8Q9NZF1 115 aa12.39□□□□□ -0.43
CBWD3-201ENST00000360171 BRK1Q8WUW1 75 aa12.36□□□□□ -0.43
CBWD3-201ENST00000360171 KRTAP10-1P60331 282 aa12.36□□□□□ -0.43
CBWD3-201ENST00000360171 SPANXA2-OT1Q8N9U9 137 aa12.35□□□□□ -0.43
CBWD3-201ENST00000360171 KRTAP13-1Q8IUC0 172 aa12.35□□□□□ -0.43
CBWD3-201ENST00000360171 LINC00208Q96KT6 92 aa12.34□□□□□ -0.43
CBWD3-201ENST00000360171 H0Y9P7 68 aa12.32□□□□□ -0.44
CBWD3-201ENST00000360171 Q6ZSA8 131 aa12.3□□□□□ -0.44
CBWD3-201ENST00000360171 CIRBP-AS1Q8TBR5 109 aa12.28□□□□□ -0.44
CBWD3-201ENST00000360171 PKHD1P08F94 4074 aa12.27□□□□□ -0.45
CBWD3-201ENST00000360171 PRR4Q16378 134 aa12.26□□□□□ -0.45
CBWD3-201ENST00000360171 MMP24-AS1A0A0U1RRL7 71 aa12.26□□□□□ -0.45
CBWD3-201ENST00000360171 A0A1B0GVY2 172 aa12.26□□□□□ -0.45
CBWD3-201ENST00000360171 PSORS1C2Q9UIG4 136 aa12.25□□□□□ -0.45
CBWD3-201ENST00000360171 V9GYY9 64 aa12.25□□□□□ -0.45
CBWD3-201ENST00000360171 SRRM2Q9UQ35 2752 aaKnown RBP12.24□□□□□ -0.45
CBWD3-201ENST00000360171 ASB16-AS1Q495Z4 193 aa12.2□□□□□ -0.46
CBWD3-201ENST00000360171 LINC00483Q53H64 154 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms