RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 LINC00167Q96N53 147 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
VPS13A-201ENST00000355766 A0A087WYN8 130 aa4.37□□□□□ -1.71
VPS13A-201ENST00000355766 C9JAW5 83 aa4.37□□□□□ -1.71
VPS13A-201ENST00000355766 K7ERU9 68 aa4.37□□□□□ -1.71
VPS13A-201ENST00000355766 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
VPS13A-201ENST00000355766 OCIAD2Q56VL3 154 aa4.37□□□□□ -1.71
VPS13A-201ENST00000355766 LECT2O14960 151 aa4.36□□□□□ -1.71
VPS13A-201ENST00000355766 SPRR1AP35321 89 aa4.36□□□□□ -1.71
VPS13A-201ENST00000355766 C6orf99Q4VX62 202 aa4.36□□□□□ -1.71
VPS13A-201ENST00000355766 MRPL55Q7Z7F7 128 aaKnown RBP4.36□□□□□ -1.71
VPS13A-201ENST00000355766 PPDPFLQ8WWR9 84 aa4.36□□□□□ -1.71
VPS13A-201ENST00000355766 CLEC2BQ92478 149 aa4.36□□□□□ -1.71
VPS13A-201ENST00000355766 IGLV1-50A0A075B6I6 118 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 A0A096LNI7 61 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 PRR3P79522 188 aaKnown RBP4.35□□□□□ -1.71
VPS13A-201ENST00000355766 LINC00575Q6W349 94 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 C7orf33Q8WU49 177 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 FAM218AQ96MZ4 157 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 ORMDL1Q9P0S3 153 aa4.35□□□□□ -1.71
VPS13A-201ENST00000355766 TMEM256-PLSCR3K7ERE1 68 aa4.34□□□□□ -1.71
VPS13A-201ENST00000355766 COX7BP24311 80 aa4.34□□□□□ -1.71
VPS13A-201ENST00000355766 RPL37AP61513 92 aaKnown RBP4.34□□□□□ -1.71
VPS13A-201ENST00000355766 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
VPS13A-201ENST00000355766 ETDBQ3ZM63 59 aa4.34□□□□□ -1.71
VPS13A-201ENST00000355766 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-201ENST00000355766 CIRBP-AS1Q8TBR5 109 aa4.34□□□□□ -1.71
VPS13A-201ENST00000355766 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
VPS13A-201ENST00000355766 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 FAM240AA0A1B0GVK7 77 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 hADV29S1A0JD25 119 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
VPS13A-201ENST00000355766 H0Y9J4 135 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 Q6ZRX8 168 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 SPACA4Q8TDM5 124 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
VPS13A-201ENST00000355766 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.32□□□□□ -1.72
VPS13A-201ENST00000355766 JMJD7-PLA2G4BH0Y9G9 81 aa4.32□□□□□ -1.72
VPS13A-201ENST00000355766 OBSCN-AS1Q96MR7 158 aa4.32□□□□□ -1.72
VPS13A-201ENST00000355766 BAALC-AS2P0C853 105 aa4.31□□□□□ -1.72
VPS13A-201ENST00000355766 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
VPS13A-201ENST00000355766 FAM19A5Q7Z5A7 132 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-201ENST00000355766 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
VPS13A-201ENST00000355766 ETDCA0A1B0GVM5 59 aa4.3□□□□□ -1.72
VPS13A-201ENST00000355766 FAM168BA1KXE4 195 aa4.3□□□□□ -1.72
VPS13A-201ENST00000355766 ACYP1P07311 99 aa4.3□□□□□ -1.72
VPS13A-201ENST00000355766 PDE6GP18545 87 aa4.3□□□□□ -1.72
VPS13A-201ENST00000355766 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
VPS13A-201ENST00000355766 IGKV2-24A0A0C4DH68 120 aa4.29□□□□□ -1.72
VPS13A-201ENST00000355766 MTURNQ8N3F0 131 aa4.29□□□□□ -1.72
VPS13A-201ENST00000355766 IGLV5-48A0A075B6I7 105 aa4.28□□□□□ -1.72
VPS13A-201ENST00000355766 A0A1W2PNN7 141 aa4.28□□□□□ -1.72
VPS13A-201ENST00000355766 Q6ZQY7 126 aa4.28□□□□□ -1.72
VPS13A-201ENST00000355766 TEX49A0A1B0GTD5 131 aa4.27□□□□□ -1.73
VPS13A-201ENST00000355766 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
VPS13A-201ENST00000355766 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
VPS13A-201ENST00000355766 LOC110117498A0A087WWA1 95 aa4.26□□□□□ -1.73
VPS13A-201ENST00000355766 A0A1B0GW54 56 aa4.26□□□□□ -1.73
VPS13A-201ENST00000355766 BCE1O60756 84 aa4.26□□□□□ -1.73
VPS13A-201ENST00000355766 CHTF8P0CG12 524 aa4.26□□□□□ -1.73
VPS13A-201ENST00000355766 UBE2BP63146 152 aa4.26□□□□□ -1.73
VPS13A-201ENST00000355766 MUC2Q02817 5179 aa4.24□□□□□ -1.73
VPS13A-201ENST00000355766 RBM3P98179 157 aaKnown RBP4.24□□□□□ -1.73
VPS13A-201ENST00000355766 KRTAP13-1Q8IUC0 172 aa4.24□□□□□ -1.73
VPS13A-201ENST00000355766 Q9BRP9 147 aa4.24□□□□□ -1.73
VPS13A-201ENST00000355766 SPRR1BP22528 89 aa4.23□□□□□ -1.73
VPS13A-201ENST00000355766 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
VPS13A-201ENST00000355766 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
VPS13A-201ENST00000355766 SMCR5Q8TEV8 140 aa4.23□□□□□ -1.73
VPS13A-201ENST00000355766 ZNF706Q9Y5V0 76 aaPredicted RBP4.23□□□□□ -1.73
VPS13A-201ENST00000355766 LPAP08519 4548 aa4.23□□□□□ -1.73
VPS13A-201ENST00000355766 TRBV7-4A0A0J9YYF1 115 aa4.22□□□□□ -1.73
VPS13A-201ENST00000355766 PANO1I0J062 215 aa4.22□□□□□ -1.73
VPS13A-201ENST00000355766 UBE2AP49459 152 aa4.22□□□□□ -1.73
VPS13A-201ENST00000355766 LINC01547P58512 204 aaPredicted RBP4.22□□□□□ -1.73
VPS13A-201ENST00000355766 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
VPS13A-201ENST00000355766 DSCR8Q96T75 97 aa4.22□□□□□ -1.73
VPS13A-201ENST00000355766 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
VPS13A-201ENST00000355766 IGLV8-61A0A075B6I0 122 aa4.21□□□□□ -1.74
VPS13A-201ENST00000355766 CCKP06307 115 aa4.21□□□□□ -1.74
VPS13A-201ENST00000355766 Q6ZQT0 140 aa4.21□□□□□ -1.74
VPS13A-201ENST00000355766 DPH3Q96FX2 82 aa4.21□□□□□ -1.74
VPS13A-201ENST00000355766 VPS25Q9BRG1 176 aa4.21□□□□□ -1.74
VPS13A-201ENST00000355766 C14orf132Q9NPU4 83 aa4.21□□□□□ -1.74
VPS13A-201ENST00000355766 A0A0U1RQV1 116 aa4.2□□□□□ -1.74
VPS13A-201ENST00000355766 F8WEM9 126 aa4.2□□□□□ -1.74
VPS13A-201ENST00000355766 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
VPS13A-201ENST00000355766 Q6JHZ5 121 aa4.2□□□□□ -1.74
VPS13A-201ENST00000355766 Q8N377 158 aa4.2□□□□□ -1.74
VPS13A-201ENST00000355766 ZNF861PO60384 105 aa4.19□□□□□ -1.74
VPS13A-201ENST00000355766 PRLHP81277 87 aa4.19□□□□□ -1.74
VPS13A-201ENST00000355766 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
VPS13A-201ENST00000355766 GAGE2AQ6NT46 116 aa4.19□□□□□ -1.74
VPS13A-201ENST00000355766 HIGD2AQ9BW72 106 aa4.19□□□□□ -1.74
VPS13A-201ENST00000355766 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
VPS13A-201ENST00000355766 LINC00643Q86TS7 51 aa4.18□□□□□ -1.74
VPS13A-201ENST00000355766 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
VPS13A-201ENST00000355766 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms