RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SPRR1AP35321 89 aa11.34□□□□□ -0.59
APP-202ENST00000348990 J3QKU1 62 aa11.34□□□□□ -0.59
APP-202ENST00000348990 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
APP-202ENST00000348990 B9D2Q9BPU9 175 aa11.34□□□□□ -0.59
APP-202ENST00000348990 LCE6AA0A183 80 aa11.33□□□□□ -0.6
APP-202ENST00000348990 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
APP-202ENST00000348990 KRTAP10-11P60412 298 aa11.33□□□□□ -0.6
APP-202ENST00000348990 H0Y9P7 68 aa11.32□□□□□ -0.6
APP-202ENST00000348990 DNAH10OSP0CZ25 163 aa11.32□□□□□ -0.6
APP-202ENST00000348990 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
APP-202ENST00000348990 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
APP-202ENST00000348990 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
APP-202ENST00000348990 H0Y9J4 135 aa11.3□□□□□ -0.6
APP-202ENST00000348990 CHKB-CPT1BH3BT56 60 aa11.3□□□□□ -0.6
APP-202ENST00000348990 SPTSSBQ8NFR3 76 aa11.28□□□□□ -0.6
APP-202ENST00000348990 PRR15Q8IV56 129 aa11.28□□□□□ -0.6
APP-202ENST00000348990 IGLV5-37A0A075B6J1 123 aa11.27□□□□□ -0.61
APP-202ENST00000348990 CYP4F30PQ9H0H9 118 aa11.27□□□□□ -0.61
APP-202ENST00000348990 NBEAL1Q6ZS30 2694 aa11.26□□□□□ -0.61
APP-202ENST00000348990 PRR15LQ9BU68 103 aa11.26□□□□□ -0.61
APP-202ENST00000348990 SRRM2Q9UQ35 2752 aaKnown RBP11.26□□□□□ -0.61
APP-202ENST00000348990 A8MU10 97 aa11.25□□□□□ -0.61
APP-202ENST00000348990 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
APP-202ENST00000348990 PCOTHQ58A44 107 aa11.21□□□□□ -0.62
APP-202ENST00000348990 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
APP-202ENST00000348990 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
APP-202ENST00000348990 A6NED7 52 aa11.16□□□□□ -0.62
APP-202ENST00000348990 NDUFS5O43920 106 aa11.16□□□□□ -0.62
APP-202ENST00000348990 Q5VV11 94 aa11.16□□□□□ -0.62
APP-202ENST00000348990 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
APP-202ENST00000348990 A8MWP4 228 aa11.13□□□□□ -0.63
APP-202ENST00000348990 Q8N9P0 234 aaPredicted RBP11.13□□□□□ -0.63
APP-202ENST00000348990 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
APP-202ENST00000348990 KRTAP29-1A8MX34 341 aaPredicted RBP11.12□□□□□ -0.63
APP-202ENST00000348990 C16orf90A8MZG2 172 aa11.11□□□□□ -0.63
APP-202ENST00000348990 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
APP-202ENST00000348990 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
APP-202ENST00000348990 COA5Q86WW8 74 aa11.09□□□□□ -0.63
APP-202ENST00000348990 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
APP-202ENST00000348990 CD164Q04900 197 aa11.08□□□□□ -0.64
APP-202ENST00000348990 SPANXA2-OT1Q8N9U9 137 aa11.08□□□□□ -0.64
APP-202ENST00000348990 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
APP-202ENST00000348990 H3BPC8 53 aa11.07□□□□□ -0.64
APP-202ENST00000348990 SPAG11AQ6PDA7 123 aa11.06□□□□□ -0.64
APP-202ENST00000348990 KRTAP11-1Q8IUC1 163 aa11.06□□□□□ -0.64
APP-202ENST00000348990 IGLV8-61A0A075B6I0 122 aa11.05□□□□□ -0.64
APP-202ENST00000348990 STAB2Q8WWQ8 2551 aa11.04□□□□□ -0.64
APP-202ENST00000348990 LINC00472Q9H8W2 130 aa11.04□□□□□ -0.64
APP-202ENST00000348990 CSMD3Q7Z407 3707 aa11.03□□□□□ -0.64
APP-202ENST00000348990 IGHV6-1A0A0B4J1U7 121 aa11.01□□□□□ -0.65
APP-202ENST00000348990 KRTAP1-5Q9BYS1 174 aa11.01□□□□□ -0.65
APP-202ENST00000348990 CDK2AP2O75956 126 aa11□□□□□ -0.65
APP-202ENST00000348990 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
APP-202ENST00000348990 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
APP-202ENST00000348990 TENM2Q9NT68 2774 aa10.97□□□□□ -0.65
APP-202ENST00000348990 COL7A1Q02388 2944 aa10.96□□□□□ -0.65
APP-202ENST00000348990 KRTAP24-1Q3LI83 254 aa10.95□□□□□ -0.66
APP-202ENST00000348990 LCA10Q71F78 164 aa10.95□□□□□ -0.66
APP-202ENST00000348990 IGLV7-46A0A075B6I9 117 aa10.94□□□□□ -0.66
APP-202ENST00000348990 ANK2Q01484 3957 aa10.92□□□□□ -0.66
APP-202ENST00000348990 LOC101927531A0A1B0GV80 90 aa10.91□□□□□ -0.66
APP-202ENST00000348990 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
APP-202ENST00000348990 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
APP-202ENST00000348990 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
APP-202ENST00000348990 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.66
APP-202ENST00000348990 ATP11AUNQ6ZP68 121 aa10.9□□□□□ -0.67
APP-202ENST00000348990 Q75L30 129 aa10.9□□□□□ -0.67
APP-202ENST00000348990 SPRR1BP22528 89 aa10.89□□□□□ -0.67
APP-202ENST00000348990 C8orf17Q9NRJ1 99 aa10.89□□□□□ -0.67
APP-202ENST00000348990 TP53AIP1Q9HCN2 124 aa10.88□□□□□ -0.67
APP-202ENST00000348990 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
APP-202ENST00000348990 PANO1I0J062 215 aa10.85□□□□□ -0.67
APP-202ENST00000348990 MOBPQ13875 183 aa10.84□□□□□ -0.67
APP-202ENST00000348990 K7EIL1 84 aa10.82□□□□□ -0.68
APP-202ENST00000348990 CDC42SE1Q9NRR8 79 aa10.82□□□□□ -0.68
APP-202ENST00000348990 SPINK7P58062 85 aa10.8□□□□□ -0.68
APP-202ENST00000348990 HRES1P13985 223 aa10.8□□□□□ -0.68
APP-202ENST00000348990 PRR26Q8N8Z3 221 aa10.8□□□□□ -0.68
APP-202ENST00000348990 A0A1B0GVX0 72 aa10.79□□□□□ -0.68
APP-202ENST00000348990 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
APP-202ENST00000348990 DNAH10Q8IVF4 4471 aa10.78□□□□□ -0.68
APP-202ENST00000348990 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.68
APP-202ENST00000348990 A0A087X002 238 aa10.77□□□□□ -0.69
APP-202ENST00000348990 NOTCH2NLQ7Z3S9 236 aa10.77□□□□□ -0.69
APP-202ENST00000348990 Q96NJ1 140 aa10.76□□□□□ -0.69
APP-202ENST00000348990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.74□□□□□ -0.69
APP-202ENST00000348990 RETNLBQ9BQ08 111 aa10.73□□□□□ -0.69
APP-202ENST00000348990 A6NN06 94 aa10.71□□□□□ -0.69
APP-202ENST00000348990 Q6ZR54 194 aa10.71□□□□□ -0.69
APP-202ENST00000348990 CIRBP-AS1Q8TBR5 109 aa10.68□□□□□ -0.7
APP-202ENST00000348990 APLNQ9ULZ1 77 aa10.68□□□□□ -0.7
APP-202ENST00000348990 ZNF706Q9Y5V0 76 aaPredicted RBP10.67□□□□□ -0.7
APP-202ENST00000348990 C7orf65Q6ZTY9 151 aa10.67□□□□□ -0.7
APP-202ENST00000348990 KRTAP13-1Q8IUC0 172 aa10.66□□□□□ -0.7
APP-202ENST00000348990 NBDYA0A0U1RRE5 68 aa10.66□□□□□ -0.7
APP-202ENST00000348990 MDFIQ99750 246 aa10.66□□□□□ -0.7
APP-202ENST00000348990 LYSTQ99698 3801 aa10.64□□□□□ -0.71
APP-202ENST00000348990 PSORS1C2Q9UIG4 136 aa10.64□□□□□ -0.71
APP-202ENST00000348990 Q5W150 140 aa10.63□□□□□ -0.71
APP-202ENST00000348990 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms