RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 PHF5AQ7RTV0 110 aaKnown RBP13.43□□□□□ -0.26
PTDSS1-201ENST00000337004 H0Y9J4 135 aa13.42□□□□□ -0.26
PTDSS1-201ENST00000337004 APLNQ9ULZ1 77 aa13.42□□□□□ -0.26
PTDSS1-201ENST00000337004 CHTF8P0CG12 524 aa13.41□□□□□ -0.26
PTDSS1-201ENST00000337004 ZCCHC13Q8WW36 166 aaKnown RBP13.41□□□□□ -0.26
PTDSS1-201ENST00000337004 SPRR1BP22528 89 aa13.39□□□□□ -0.27
PTDSS1-201ENST00000337004 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
PTDSS1-201ENST00000337004 FAM229BQ4G0N7 80 aa13.37□□□□□ -0.27
PTDSS1-201ENST00000337004 PKIGQ9Y2B9 76 aa13.37□□□□□ -0.27
PTDSS1-201ENST00000337004 BAHCC1Q9P281 2608 aa13.37□□□□□ -0.27
PTDSS1-201ENST00000337004 C9orf163Q8N9P6 203 aa13.36□□□□□ -0.27
PTDSS1-201ENST00000337004 WFDC13Q8IUB5 93 aa13.36□□□□□ -0.27
PTDSS1-201ENST00000337004 LINC00336Q6ZUF6 198 aa13.34□□□□□ -0.27
PTDSS1-201ENST00000337004 NBEAL1Q6ZS30 2694 aa13.33□□□□□ -0.28
PTDSS1-201ENST00000337004 B9D2Q9BPU9 175 aa13.32□□□□□ -0.28
PTDSS1-201ENST00000337004 RPL37AP61513 92 aaKnown RBP13.32□□□□□ -0.28
PTDSS1-201ENST00000337004 MPLKIPQ8TAP9 179 aa13.3□□□□□ -0.28
PTDSS1-201ENST00000337004 LRCOL1A6NCL2 159 aa13.3□□□□□ -0.28
PTDSS1-201ENST00000337004 MP68P56378 58 aa13.3□□□□□ -0.28
PTDSS1-201ENST00000337004 COL6A5A8TX70 2615 aa13.29□□□□□ -0.28
PTDSS1-201ENST00000337004 hDV103S1A0JD37 113 aa13.29□□□□□ -0.28
PTDSS1-201ENST00000337004 NDUFB1O75438 58 aa13.29□□□□□ -0.28
PTDSS1-201ENST00000337004 KRTAP29-1A8MX34 341 aaPredicted RBP13.28□□□□□ -0.28
PTDSS1-201ENST00000337004 PRR15Q8IV56 129 aa13.28□□□□□ -0.28
PTDSS1-201ENST00000337004 PRO0628Q9UI54 55 aa13.27□□□□□ -0.29
PTDSS1-201ENST00000337004 NBDYA0A0U1RRE5 68 aa13.26□□□□□ -0.29
PTDSS1-201ENST00000337004 LINC00472Q9H8W2 130 aa13.26□□□□□ -0.29
PTDSS1-201ENST00000337004 DNAH10Q8IVF4 4471 aa13.26□□□□□ -0.29
PTDSS1-201ENST00000337004 A8MWP4 228 aa13.25□□□□□ -0.29
PTDSS1-201ENST00000337004 CASC2Q6XLA1 102 aa13.25□□□□□ -0.29
PTDSS1-201ENST00000337004 C1orf64Q8NEQ6 169 aa13.25□□□□□ -0.29
PTDSS1-201ENST00000337004 CYP4F30PQ9H0H9 118 aa13.22□□□□□ -0.29
PTDSS1-201ENST00000337004 LYSTQ99698 3801 aa13.2□□□□□ -0.3
PTDSS1-201ENST00000337004 KRTAP13-1Q8IUC0 172 aa13.2□□□□□ -0.3
PTDSS1-201ENST00000337004 LINC00208Q96KT6 92 aa13.2□□□□□ -0.3
PTDSS1-201ENST00000337004 PANO1I0J062 215 aa13.19□□□□□ -0.3
PTDSS1-201ENST00000337004 TRAV22A0A0B4J277 110 aa13.18□□□□□ -0.3
PTDSS1-201ENST00000337004 MDFIQ99750 246 aa13.18□□□□□ -0.3
PTDSS1-201ENST00000337004 Q6ZRN7 208 aaPredicted RBP13.18□□□□□ -0.3
PTDSS1-201ENST00000337004 DNAH9Q9NYC9 4486 aa13.18□□□□□ -0.3
PTDSS1-201ENST00000337004 H3BPC8 53 aa13.17□□□□□ -0.3
PTDSS1-201ENST00000337004 NUPR2A6NF83 97 aa13.17□□□□□ -0.3
PTDSS1-201ENST00000337004 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
PTDSS1-201ENST00000337004 H0Y9P7 68 aa13.16□□□□□ -0.3
PTDSS1-201ENST00000337004 STAB2Q8WWQ8 2551 aa13.16□□□□□ -0.3
PTDSS1-201ENST00000337004 PRR4Q16378 134 aa13.15□□□□□ -0.3
PTDSS1-201ENST00000337004 SPACA4Q8TDM5 124 aa13.13□□□□□ -0.31
PTDSS1-201ENST00000337004 BRK1Q8WUW1 75 aa13.12□□□□□ -0.31
PTDSS1-201ENST00000337004 Q1T7F1 81 aa13.11□□□□□ -0.31
PTDSS1-201ENST00000337004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.1□□□□□ -0.31
PTDSS1-201ENST00000337004 IGLV9-49A0A0B4J1Y8 123 aa13.09□□□□□ -0.31
PTDSS1-201ENST00000337004 SPANXA2-OT1Q8N9U9 137 aa13.08□□□□□ -0.32
PTDSS1-201ENST00000337004 MMP24-AS1A0A0U1RRL7 71 aa13.07□□□□□ -0.32
PTDSS1-201ENST00000337004 COL7A1Q02388 2944 aa13.07□□□□□ -0.32
PTDSS1-201ENST00000337004 LINC00483Q53H64 154 aa13.05□□□□□ -0.32
PTDSS1-201ENST00000337004 SRRM2Q9UQ35 2752 aaKnown RBP13.04□□□□□ -0.32
PTDSS1-201ENST00000337004 DYNC2H1Q8NCM8 4307 aaKnown RBP13.04□□□□□ -0.32
PTDSS1-201ENST00000337004 ZNF706Q9Y5V0 76 aaPredicted RBP13.03□□□□□ -0.32
PTDSS1-201ENST00000337004 A0A087WTM6 91 aa13.02□□□□□ -0.33
PTDSS1-201ENST00000337004 Q96NJ1 140 aa13.01□□□□□ -0.33
PTDSS1-201ENST00000337004 DNAH7Q8WXX0 4024 aa12.99□□□□□ -0.33
PTDSS1-201ENST00000337004 MOBPQ13875 183 aa12.98□□□□□ -0.33
PTDSS1-201ENST00000337004 TP53AIP1Q9HCN2 124 aa12.96□□□□□ -0.33
PTDSS1-201ENST00000337004 CSMD3Q7Z407 3707 aa12.96□□□□□ -0.33
PTDSS1-201ENST00000337004 ASB16-AS1Q495Z4 193 aa12.96□□□□□ -0.33
PTDSS1-201ENST00000337004 V9GYY9 64 aa12.96□□□□□ -0.33
PTDSS1-201ENST00000337004 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
PTDSS1-201ENST00000337004 RTL8CO15255 209 aa12.95□□□□□ -0.34
PTDSS1-201ENST00000337004 PSORS1C2Q9UIG4 136 aa12.95□□□□□ -0.34
PTDSS1-201ENST00000337004 WWC2-AS2Q96NR7 200 aa12.94□□□□□ -0.34
PTDSS1-201ENST00000337004 C8orf17Q9NRJ1 99 aa12.93□□□□□ -0.34
PTDSS1-201ENST00000337004 TENM2Q9NT68 2774 aa12.92□□□□□ -0.34
PTDSS1-201ENST00000337004 PLECQ15149 4684 aaKnown RBP12.92□□□□□ -0.34
PTDSS1-201ENST00000337004 PSPHP1O15172 72 aa12.92□□□□□ -0.34
PTDSS1-201ENST00000337004 ZNF861PO60384 105 aa12.91□□□□□ -0.34
PTDSS1-201ENST00000337004 CDK2AP2O75956 126 aa12.9□□□□□ -0.34
PTDSS1-201ENST00000337004 PLAC8Q9NZF1 115 aa12.9□□□□□ -0.34
PTDSS1-201ENST00000337004 A0A1B0GVX0 72 aa12.89□□□□□ -0.35
PTDSS1-201ENST00000337004 IGHV6-1A0A0B4J1U7 121 aa12.88□□□□□ -0.35
PTDSS1-201ENST00000337004 IGLV7-46A0A075B6I9 117 aa12.87□□□□□ -0.35
PTDSS1-201ENST00000337004 ANAPC11Q9NYG5 84 aa12.86□□□□□ -0.35
PTDSS1-201ENST00000337004 Q6ZR54 194 aa12.84□□□□□ -0.35
PTDSS1-201ENST00000337004 NDUFS5O43920 106 aa12.84□□□□□ -0.35
PTDSS1-201ENST00000337004 A8MUN3 132 aa12.81□□□□□ -0.36
PTDSS1-201ENST00000337004 PCOTHQ58A44 107 aa12.81□□□□□ -0.36
PTDSS1-201ENST00000337004 MRPL34Q9BQ48 92 aaKnown RBP12.81□□□□□ -0.36
PTDSS1-201ENST00000337004 C1orf195Q5TG92 126 aa12.8□□□□□ -0.36
PTDSS1-201ENST00000337004 Q8N9P0 234 aaPredicted RBP12.8□□□□□ -0.36
PTDSS1-201ENST00000337004 LIMD2Q9BT23 127 aa12.8□□□□□ -0.36
PTDSS1-201ENST00000337004 COA5Q86WW8 74 aa12.78□□□□□ -0.36
PTDSS1-201ENST00000337004 CD164Q04900 197 aa12.77□□□□□ -0.37
PTDSS1-201ENST00000337004 IGLV7-43P04211 117 aa12.73□□□□□ -0.37
PTDSS1-201ENST00000337004 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
PTDSS1-201ENST00000337004 Q5VV11 94 aa12.73□□□□□ -0.37
PTDSS1-201ENST00000337004 VPS13DQ5THJ4 4388 aa12.73□□□□□ -0.37
PTDSS1-201ENST00000337004 A0A087X002 238 aa12.72□□□□□ -0.37
PTDSS1-201ENST00000337004 NOTCH2NLQ7Z3S9 236 aa12.72□□□□□ -0.37
PTDSS1-201ENST00000337004 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.37
PTDSS1-201ENST00000337004 SPINK6Q6UWN8 80 aa12.69□□□□□ -0.38
PTDSS1-201ENST00000337004 PRR15LQ9BU68 103 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms