RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CSMD3Q7Z407 3707 aa8.86□□□□□ -0.99
ATP2C1-201ENST00000328560 UBE2AP49459 152 aa8.85□□□□□ -0.99
ATP2C1-201ENST00000328560 SPRR4Q96PI1 79 aa8.85□□□□□ -0.99
ATP2C1-201ENST00000328560 MDFIQ99750 246 aa8.85□□□□□ -0.99
ATP2C1-201ENST00000328560 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
ATP2C1-201ENST00000328560 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
ATP2C1-201ENST00000328560 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
ATP2C1-201ENST00000328560 EPM2AB3EWF7 344 aa8.84□□□□□ -0.99
ATP2C1-201ENST00000328560 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
ATP2C1-201ENST00000328560 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
ATP2C1-201ENST00000328560 A0A1B0GW54 56 aa8.82□□□□□ -1
ATP2C1-201ENST00000328560 NUPR2A6NF83 97 aa8.82□□□□□ -1
ATP2C1-201ENST00000328560 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
ATP2C1-201ENST00000328560 LINC00474Q9P2X8 69 aa8.81□□□□□ -1
ATP2C1-201ENST00000328560 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
ATP2C1-201ENST00000328560 COL7A1Q02388 2944 aa8.8□□□□□ -1
ATP2C1-201ENST00000328560 DNAH10Q8IVF4 4471 aa8.8□□□□□ -1
ATP2C1-201ENST00000328560 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
ATP2C1-201ENST00000328560 LYSTQ99698 3801 aa8.79□□□□□ -1
ATP2C1-201ENST00000328560 NBDYA0A0U1RRE5 68 aa8.78□□□□□ -1
ATP2C1-201ENST00000328560 HCG22E2RYF7 251 aa8.78□□□□□ -1
ATP2C1-201ENST00000328560 SMIM26A0A096LP01 95 aa8.77□□□□□ -1.01
ATP2C1-201ENST00000328560 PRR4Q16378 134 aa8.76□□□□□ -1.01
ATP2C1-201ENST00000328560 MPLKIPQ8TAP9 179 aa8.76□□□□□ -1.01
ATP2C1-201ENST00000328560 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
ATP2C1-201ENST00000328560 FP248Q71RG6 208 aaPredicted RBP8.75□□□□□ -1.01
ATP2C1-201ENST00000328560 LRCOL1A6NCL2 159 aa8.74□□□□□ -1.01
ATP2C1-201ENST00000328560 PANO1I0J062 215 aa8.74□□□□□ -1.01
ATP2C1-201ENST00000328560 C9orf163Q8N9P6 203 aa8.74□□□□□ -1.01
ATP2C1-201ENST00000328560 DNAH1Q9P2D7 4330 aa8.73□□□□□ -1.01
ATP2C1-201ENST00000328560 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
ATP2C1-201ENST00000328560 IGLV9-49A0A0B4J1Y8 123 aa8.68□□□□□ -1.02
ATP2C1-201ENST00000328560 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
ATP2C1-201ENST00000328560 H0Y9J4 135 aa8.68□□□□□ -1.02
ATP2C1-201ENST00000328560 DNAH9Q9NYC9 4486 aa8.67□□□□□ -1.02
ATP2C1-201ENST00000328560 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
ATP2C1-201ENST00000328560 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
ATP2C1-201ENST00000328560 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
ATP2C1-201ENST00000328560 MP68P56378 58 aa8.65□□□□□ -1.02
ATP2C1-201ENST00000328560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
ATP2C1-201ENST00000328560 PMAIP1Q13794 54 aa8.64□□□□□ -1.03
ATP2C1-201ENST00000328560 LCE6AA0A183 80 aa8.63□□□□□ -1.03
ATP2C1-201ENST00000328560 PRR15Q8IV56 129 aa8.62□□□□□ -1.03
ATP2C1-201ENST00000328560 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
ATP2C1-201ENST00000328560 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
ATP2C1-201ENST00000328560 SPRR1BP22528 89 aa8.61□□□□□ -1.03
ATP2C1-201ENST00000328560 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
ATP2C1-201ENST00000328560 A0A087WTM6 91 aa8.6□□□□□ -1.03
ATP2C1-201ENST00000328560 A8MWP4 228 aa8.6□□□□□ -1.03
ATP2C1-201ENST00000328560 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
ATP2C1-201ENST00000328560 H0Y9P7 68 aa8.59□□□□□ -1.03
ATP2C1-201ENST00000328560 LINC00472Q9H8W2 130 aa8.59□□□□□ -1.03
ATP2C1-201ENST00000328560 DNAH7Q8WXX0 4024 aa8.59□□□□□ -1.04
ATP2C1-201ENST00000328560 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
ATP2C1-201ENST00000328560 KRTAP29-1A8MX34 341 aaPredicted RBP8.57□□□□□ -1.04
ATP2C1-201ENST00000328560 RTL8CO15255 209 aa8.57□□□□□ -1.04
ATP2C1-201ENST00000328560 LY6G6CO95867 125 aa8.57□□□□□ -1.04
ATP2C1-201ENST00000328560 NDUFB1O75438 58 aa8.56□□□□□ -1.04
ATP2C1-201ENST00000328560 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
ATP2C1-201ENST00000328560 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
ATP2C1-201ENST00000328560 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
ATP2C1-201ENST00000328560 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
ATP2C1-201ENST00000328560 TRAV22A0A0B4J277 110 aa8.54□□□□□ -1.04
ATP2C1-201ENST00000328560 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
ATP2C1-201ENST00000328560 MOBPQ13875 183 aa8.53□□□□□ -1.04
ATP2C1-201ENST00000328560 PSORS1C2Q9UIG4 136 aa8.52□□□□□ -1.05
ATP2C1-201ENST00000328560 ZNF706Q9Y5V0 76 aaPredicted RBP8.52□□□□□ -1.05
ATP2C1-201ENST00000328560 NDUFS5O43920 106 aa8.51□□□□□ -1.05
ATP2C1-201ENST00000328560 TGP01266 2768 aa8.51□□□□□ -1.05
ATP2C1-201ENST00000328560 PSPHP1O15172 72 aa8.5□□□□□ -1.05
ATP2C1-201ENST00000328560 IGHV6-1A0A0B4J1U7 121 aa8.5□□□□□ -1.05
ATP2C1-201ENST00000328560 CD164Q04900 197 aa8.5□□□□□ -1.05
ATP2C1-201ENST00000328560 MMP24-AS1A0A0U1RRL7 71 aa8.5□□□□□ -1.05
ATP2C1-201ENST00000328560 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
ATP2C1-201ENST00000328560 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
ATP2C1-201ENST00000328560 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.05
ATP2C1-201ENST00000328560 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.05
ATP2C1-201ENST00000328560 Q96NJ1 140 aa8.44□□□□□ -1.06
ATP2C1-201ENST00000328560 WWC2-AS2Q96NR7 200 aa8.44□□□□□ -1.06
ATP2C1-201ENST00000328560 Q6ZR54 194 aa8.44□□□□□ -1.06
ATP2C1-201ENST00000328560 ZNF861PO60384 105 aa8.43□□□□□ -1.06
ATP2C1-201ENST00000328560 C8orf17Q9NRJ1 99 aa8.43□□□□□ -1.06
ATP2C1-201ENST00000328560 H3BPC8 53 aa8.41□□□□□ -1.06
ATP2C1-201ENST00000328560 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
ATP2C1-201ENST00000328560 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
ATP2C1-201ENST00000328560 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
ATP2C1-201ENST00000328560 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
ATP2C1-201ENST00000328560 H3BS24 57 aa8.39□□□□□ -1.07
ATP2C1-201ENST00000328560 A0A087X002 238 aa8.39□□□□□ -1.07
ATP2C1-201ENST00000328560 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
ATP2C1-201ENST00000328560 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
ATP2C1-201ENST00000328560 A8MUN3 132 aa8.39□□□□□ -1.07
ATP2C1-201ENST00000328560 Q1T7F1 81 aa8.39□□□□□ -1.07
ATP2C1-201ENST00000328560 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
ATP2C1-201ENST00000328560 DYNC2H1Q8NCM8 4307 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-201ENST00000328560 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
ATP2C1-201ENST00000328560 RBM12B-AS1Q9P1G2 102 aa8.36□□□□□ -1.07
ATP2C1-201ENST00000328560 PRKDCP78527 4128 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-201ENST00000328560 KMT2AQ03164 3969 aa8.34□□□□□ -1.07
ATP2C1-201ENST00000328560 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms