RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 DEFB116Q30KQ4 102 aa10.56□□□□□ -0.72
SSH1-201ENST00000326470 A0A087WSZ3 146 aa10.55□□□□□ -0.72
SSH1-201ENST00000326470 WFDC13Q8IUB5 93 aa10.55□□□□□ -0.72
SSH1-201ENST00000326470 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
SSH1-201ENST00000326470 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
SSH1-201ENST00000326470 MP68P56378 58 aa10.54□□□□□ -0.72
SSH1-201ENST00000326470 PRR4Q16378 134 aa10.54□□□□□ -0.72
SSH1-201ENST00000326470 TRAV22A0A0B4J277 110 aa10.52□□□□□ -0.73
SSH1-201ENST00000326470 PRLHP81277 87 aa10.52□□□□□ -0.73
SSH1-201ENST00000326470 KRTAP29-1A8MX34 341 aaPredicted RBP10.5□□□□□ -0.73
SSH1-201ENST00000326470 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
SSH1-201ENST00000326470 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
SSH1-201ENST00000326470 LINC00208Q96KT6 92 aa10.48□□□□□ -0.73
SSH1-201ENST00000326470 PSPHP1O15172 72 aa10.47□□□□□ -0.73
SSH1-201ENST00000326470 A0A096LNI7 61 aa10.47□□□□□ -0.73
SSH1-201ENST00000326470 C16orf90A8MZG2 172 aa10.47□□□□□ -0.73
SSH1-201ENST00000326470 UBE2AP49459 152 aa10.46□□□□□ -0.74
SSH1-201ENST00000326470 B9D2Q9BPU9 175 aa10.46□□□□□ -0.74
SSH1-201ENST00000326470 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
SSH1-201ENST00000326470 H3BPC8 53 aa10.44□□□□□ -0.74
SSH1-201ENST00000326470 CASC2Q6XLA1 102 aa10.44□□□□□ -0.74
SSH1-201ENST00000326470 SPANXA2-OT1Q8N9U9 137 aa10.44□□□□□ -0.74
SSH1-201ENST00000326470 V9GYY9 64 aa10.44□□□□□ -0.74
SSH1-201ENST00000326470 H0Y9P7 68 aa10.43□□□□□ -0.74
SSH1-201ENST00000326470 CNBPP62633 177 aaKnown RBP10.42□□□□□ -0.74
SSH1-201ENST00000326470 MDFIQ99750 246 aa10.41□□□□□ -0.74
SSH1-201ENST00000326470 A8MWP4 228 aa10.41□□□□□ -0.74
SSH1-201ENST00000326470 SPRR1BP22528 89 aa10.41□□□□□ -0.74
SSH1-201ENST00000326470 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.74
SSH1-201ENST00000326470 LINC00472Q9H8W2 130 aa10.4□□□□□ -0.74
SSH1-201ENST00000326470 A8MUN3 132 aa10.39□□□□□ -0.75
SSH1-201ENST00000326470 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
SSH1-201ENST00000326470 H0Y9J4 135 aa10.37□□□□□ -0.75
SSH1-201ENST00000326470 DNAH3Q8TD57 4116 aa10.36□□□□□ -0.75
SSH1-201ENST00000326470 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
SSH1-201ENST00000326470 C9orf163Q8N9P6 203 aa10.35□□□□□ -0.75
SSH1-201ENST00000326470 Q5VV11 94 aa10.34□□□□□ -0.75
SSH1-201ENST00000326470 PHF5AQ7RTV0 110 aaKnown RBP10.34□□□□□ -0.75
SSH1-201ENST00000326470 KRTAP1-5Q9BYS1 174 aa10.34□□□□□ -0.75
SSH1-201ENST00000326470 Q8N9P0 234 aaPredicted RBP10.33□□□□□ -0.76
SSH1-201ENST00000326470 PMAIP1Q13794 54 aa10.32□□□□□ -0.76
SSH1-201ENST00000326470 LIMD2Q9BT23 127 aa10.31□□□□□ -0.76
SSH1-201ENST00000326470 K7EIL1 84 aa10.31□□□□□ -0.76
SSH1-201ENST00000326470 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
SSH1-201ENST00000326470 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
SSH1-201ENST00000326470 DNAH10Q8IVF4 4471 aa10.28□□□□□ -0.76
SSH1-201ENST00000326470 SEC61GP60059 68 aa10.26□□□□□ -0.77
SSH1-201ENST00000326470 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
SSH1-201ENST00000326470 C14orf177Q52M58 125 aa10.26□□□□□ -0.77
SSH1-201ENST00000326470 IGLV7-46A0A075B6I9 117 aa10.25□□□□□ -0.77
SSH1-201ENST00000326470 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
SSH1-201ENST00000326470 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
SSH1-201ENST00000326470 A8MU10 97 aa10.24□□□□□ -0.77
SSH1-201ENST00000326470 CHKB-CPT1BH3BT56 60 aa10.24□□□□□ -0.77
SSH1-201ENST00000326470 PRR15LQ9BU68 103 aa10.23□□□□□ -0.77
SSH1-201ENST00000326470 COA5Q86WW8 74 aa10.23□□□□□ -0.77
SSH1-201ENST00000326470 ASB16-AS1Q495Z4 193 aa10.21□□□□□ -0.77
SSH1-201ENST00000326470 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.78
SSH1-201ENST00000326470 Q96NJ1 140 aa10.19□□□□□ -0.78
SSH1-201ENST00000326470 TP53AIP1Q9HCN2 124 aa10.19□□□□□ -0.78
SSH1-201ENST00000326470 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
SSH1-201ENST00000326470 MOBPQ13875 183 aa10.17□□□□□ -0.78
SSH1-201ENST00000326470 Q75L30 129 aa10.17□□□□□ -0.78
SSH1-201ENST00000326470 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
SSH1-201ENST00000326470 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
SSH1-201ENST00000326470 STAB2Q8WWQ8 2551 aa10.17□□□□□ -0.78
SSH1-201ENST00000326470 PCOTHQ58A44 107 aa10.15□□□□□ -0.78
SSH1-201ENST00000326470 CD164Q04900 197 aa10.15□□□□□ -0.79
SSH1-201ENST00000326470 Q6ZR54 194 aa10.15□□□□□ -0.79
SSH1-201ENST00000326470 LYSTQ99698 3801 aa10.15□□□□□ -0.79
SSH1-201ENST00000326470 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.79
SSH1-201ENST00000326470 C8orf17Q9NRJ1 99 aa10.14□□□□□ -0.79
SSH1-201ENST00000326470 PANO1I0J062 215 aa10.13□□□□□ -0.79
SSH1-201ENST00000326470 IGLV9-49A0A0B4J1Y8 123 aa10.13□□□□□ -0.79
SSH1-201ENST00000326470 APLNQ9ULZ1 77 aa10.12□□□□□ -0.79
SSH1-201ENST00000326470 LCA10Q71F78 164 aa10.11□□□□□ -0.79
SSH1-201ENST00000326470 PRKDCP78527 4128 aaKnown RBP10.11□□□□□ -0.79
SSH1-201ENST00000326470 A6NED7 52 aa10.09□□□□□ -0.79
SSH1-201ENST00000326470 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
SSH1-201ENST00000326470 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
SSH1-201ENST00000326470 A0A1B0GVX0 72 aa10.08□□□□□ -0.8
SSH1-201ENST00000326470 ATP11AUNQ6ZP68 121 aa10.08□□□□□ -0.8
SSH1-201ENST00000326470 LINC01558Q9Y6Z2 57 aa10.07□□□□□ -0.8
SSH1-201ENST00000326470 IGHV6-1A0A0B4J1U7 121 aa10.06□□□□□ -0.8
SSH1-201ENST00000326470 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
SSH1-201ENST00000326470 NDUFS5O43920 106 aa10.06□□□□□ -0.8
SSH1-201ENST00000326470 SPTSSBQ8NFR3 76 aa10.05□□□□□ -0.8
SSH1-201ENST00000326470 CSMD3Q7Z407 3707 aa10.04□□□□□ -0.8
SSH1-201ENST00000326470 SPAG11AQ6PDA7 123 aa10.04□□□□□ -0.8
SSH1-201ENST00000326470 MRPL34Q9BQ48 92 aaKnown RBP10.04□□□□□ -0.8
SSH1-201ENST00000326470 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
SSH1-201ENST00000326470 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
SSH1-201ENST00000326470 CDK2AP2O75956 126 aa10.02□□□□□ -0.81
SSH1-201ENST00000326470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
SSH1-201ENST00000326470 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
SSH1-201ENST00000326470 HRES1P13985 223 aa10.02□□□□□ -0.81
SSH1-201ENST00000326470 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
SSH1-201ENST00000326470 KTN1-AS1Q86SY8 53 aa10.01□□□□□ -0.81
SSH1-201ENST00000326470 WWC2-AS2Q96NR7 200 aa10.01□□□□□ -0.81
SSH1-201ENST00000326470 ZNF706Q9Y5V0 76 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms