RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PRLHP81277 87 aa6.15□□□□□ -1.42
PTPRA-202ENST00000318266 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
PTPRA-202ENST00000318266 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
PTPRA-202ENST00000318266 OXLD1Q5BKU9 147 aa6.14□□□□□ -1.43
PTPRA-202ENST00000318266 B9D2Q9BPU9 175 aa6.14□□□□□ -1.43
PTPRA-202ENST00000318266 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
PTPRA-202ENST00000318266 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
PTPRA-202ENST00000318266 DEFB131BA0A096LNP1 70 aa6.13□□□□□ -1.43
PTPRA-202ENST00000318266 A0A1B0GW54 56 aa6.13□□□□□ -1.43
PTPRA-202ENST00000318266 CYP4F30PQ9H0H9 118 aa6.13□□□□□ -1.43
PTPRA-202ENST00000318266 SPRR1AP35321 89 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 A0A096LNI7 61 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 H0Y9P7 68 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 NDUFB1O75438 58 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 Q5VV11 94 aa6.12□□□□□ -1.43
PTPRA-202ENST00000318266 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
PTPRA-202ENST00000318266 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
PTPRA-202ENST00000318266 MGAM2Q2M2H8 2515 aa6.1□□□□□ -1.43
PTPRA-202ENST00000318266 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
PTPRA-202ENST00000318266 CASC2Q6XLA1 102 aa6.09□□□□□ -1.43
PTPRA-202ENST00000318266 H3BNG1 76 aa6.08□□□□□ -1.44
PTPRA-202ENST00000318266 NBEAL1Q6ZS30 2694 aa6.08□□□□□ -1.44
PTPRA-202ENST00000318266 TLX1NBP0CAT3 122 aa6.08□□□□□ -1.44
PTPRA-202ENST00000318266 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
PTPRA-202ENST00000318266 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
PTPRA-202ENST00000318266 Q8N9P0 234 aaPredicted RBP6.07□□□□□ -1.44
PTPRA-202ENST00000318266 UBE2AP49459 152 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 PCOTHQ58A44 107 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 C16orf90A8MZG2 172 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 H0Y9J4 135 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 KRTAP10-11P60412 298 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
PTPRA-202ENST00000318266 A6NED7 52 aa6.05□□□□□ -1.44
PTPRA-202ENST00000318266 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
PTPRA-202ENST00000318266 DNAH10OSP0CZ25 163 aa6.05□□□□□ -1.44
PTPRA-202ENST00000318266 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
PTPRA-202ENST00000318266 LINC00588Q9Y4M8 146 aa6.05□□□□□ -1.44
PTPRA-202ENST00000318266 COA5Q86WW8 74 aa6.02□□□□□ -1.45
PTPRA-202ENST00000318266 WWC2-AS2Q96NR7 200 aa6.02□□□□□ -1.45
PTPRA-202ENST00000318266 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
PTPRA-202ENST00000318266 LCA10Q71F78 164 aa6.01□□□□□ -1.45
PTPRA-202ENST00000318266 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
PTPRA-202ENST00000318266 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
PTPRA-202ENST00000318266 KRTAP11-1Q8IUC1 163 aa6□□□□□ -1.45
PTPRA-202ENST00000318266 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
PTPRA-202ENST00000318266 A8MWP4 228 aa6□□□□□ -1.45
PTPRA-202ENST00000318266 PHF5AQ7RTV0 110 aaKnown RBP5.99□□□□□ -1.45
PTPRA-202ENST00000318266 C9orf163Q8N9P6 203 aa5.99□□□□□ -1.45
PTPRA-202ENST00000318266 CD164Q04900 197 aa5.98□□□□□ -1.45
PTPRA-202ENST00000318266 MEGF8Q7Z7M0 2845 aa5.97□□□□□ -1.45
PTPRA-202ENST00000318266 LINC00472Q9H8W2 130 aa5.97□□□□□ -1.45
PTPRA-202ENST00000318266 NDUFS5O43920 106 aa5.97□□□□□ -1.45
PTPRA-202ENST00000318266 IGLV8-61A0A075B6I0 122 aa5.96□□□□□ -1.46
PTPRA-202ENST00000318266 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
PTPRA-202ENST00000318266 DNAH10Q8IVF4 4471 aa5.96□□□□□ -1.46
PTPRA-202ENST00000318266 MMP24-AS1A0A0U1RRL7 71 aa5.95□□□□□ -1.46
PTPRA-202ENST00000318266 H3BPC8 53 aa5.95□□□□□ -1.46
PTPRA-202ENST00000318266 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
PTPRA-202ENST00000318266 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
PTPRA-202ENST00000318266 IGLV9-49A0A0B4J1Y8 123 aa5.94□□□□□ -1.46
PTPRA-202ENST00000318266 Q75L30 129 aa5.94□□□□□ -1.46
PTPRA-202ENST00000318266 LYSTQ99698 3801 aa5.93□□□□□ -1.46
PTPRA-202ENST00000318266 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
PTPRA-202ENST00000318266 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
PTPRA-202ENST00000318266 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
PTPRA-202ENST00000318266 STAB2Q8WWQ8 2551 aa5.92□□□□□ -1.46
PTPRA-202ENST00000318266 LOC101927531A0A1B0GV80 90 aa5.92□□□□□ -1.46
PTPRA-202ENST00000318266 IGHV6-1A0A0B4J1U7 121 aa5.91□□□□□ -1.46
PTPRA-202ENST00000318266 SPINK7P58062 85 aa5.91□□□□□ -1.46
PTPRA-202ENST00000318266 A6NN06 94 aa5.89□□□□□ -1.47
PTPRA-202ENST00000318266 CDC42SE1Q9NRR8 79 aa5.89□□□□□ -1.47
PTPRA-202ENST00000318266 MOBPQ13875 183 aa5.88□□□□□ -1.47
PTPRA-202ENST00000318266 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
PTPRA-202ENST00000318266 HRES1P13985 223 aa5.87□□□□□ -1.47
PTPRA-202ENST00000318266 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
PTPRA-202ENST00000318266 K7EIL1 84 aa5.87□□□□□ -1.47
PTPRA-202ENST00000318266 C8orf17Q9NRJ1 99 aa5.86□□□□□ -1.47
PTPRA-202ENST00000318266 PANO1I0J062 215 aa5.86□□□□□ -1.47
PTPRA-202ENST00000318266 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
PTPRA-202ENST00000318266 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
PTPRA-202ENST00000318266 SPRR1BP22528 89 aa5.86□□□□□ -1.47
PTPRA-202ENST00000318266 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
PTPRA-202ENST00000318266 A0A087X002 238 aa5.85□□□□□ -1.47
PTPRA-202ENST00000318266 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
PTPRA-202ENST00000318266 Q96NJ1 140 aa5.85□□□□□ -1.47
PTPRA-202ENST00000318266 ANAPC11Q9NYG5 84 aa5.85□□□□□ -1.47
PTPRA-202ENST00000318266 UBE2DNLQ8IWF7 75 aa5.84□□□□□ -1.47
PTPRA-202ENST00000318266 CDK2AP2O75956 126 aa5.84□□□□□ -1.48
PTPRA-202ENST00000318266 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.48
PTPRA-202ENST00000318266 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
PTPRA-202ENST00000318266 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
PTPRA-202ENST00000318266 PRKDCP78527 4128 aaKnown RBP5.82□□□□□ -1.48
PTPRA-202ENST00000318266 BIRC6Q9NR09 4857 aa5.82□□□□□ -1.48
PTPRA-202ENST00000318266 DNAH3Q8TD57 4116 aa5.81□□□□□ -1.48
PTPRA-202ENST00000318266 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
PTPRA-202ENST00000318266 Q6ZR54 194 aa5.81□□□□□ -1.48
PTPRA-202ENST00000318266 DNAH9Q9NYC9 4486 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms