RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
CPNE1-201ENST00000317677 TLX1NBP0CAT3 122 aa8.37□□□□□ -1.07
CPNE1-201ENST00000317677 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
CPNE1-201ENST00000317677 NDUFS5O43920 106 aa8.35□□□□□ -1.07
CPNE1-201ENST00000317677 ELOF1P60002 83 aaKnown RBP8.35□□□□□ -1.07
CPNE1-201ENST00000317677 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
CPNE1-201ENST00000317677 Q5VV11 94 aa8.35□□□□□ -1.07
CPNE1-201ENST00000317677 A8MUN3 132 aa8.34□□□□□ -1.07
CPNE1-201ENST00000317677 NDUFB1O75438 58 aa8.34□□□□□ -1.07
CPNE1-201ENST00000317677 UBE2AP49459 152 aa8.34□□□□□ -1.07
CPNE1-201ENST00000317677 SERTAD4-AS1Q5TG53 156 aa8.34□□□□□ -1.07
CPNE1-201ENST00000317677 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
CPNE1-201ENST00000317677 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 M0R378 163 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
CPNE1-201ENST00000317677 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
CPNE1-201ENST00000317677 SMIM29Q86T20 159 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 LINC00476Q8WZB0 136 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 FAM30AQ9NZY2 134 aa8.33□□□□□ -1.08
CPNE1-201ENST00000317677 LY6G6CO95867 125 aa8.32□□□□□ -1.08
CPNE1-201ENST00000317677 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
CPNE1-201ENST00000317677 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
CPNE1-201ENST00000317677 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
CPNE1-201ENST00000317677 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
CPNE1-201ENST00000317677 HYDINQ4G0P3 5121 aa8.29□□□□□ -1.08
CPNE1-201ENST00000317677 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
CPNE1-201ENST00000317677 PLA2G2DQ9UNK4 145 aa8.29□□□□□ -1.08
CPNE1-201ENST00000317677 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
CPNE1-201ENST00000317677 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
CPNE1-201ENST00000317677 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
CPNE1-201ENST00000317677 IGLV5-48A0A075B6I7 105 aa8.26□□□□□ -1.09
CPNE1-201ENST00000317677 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
CPNE1-201ENST00000317677 Q8N9P0 234 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-201ENST00000317677 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
CPNE1-201ENST00000317677 A8MU10 97 aa8.26□□□□□ -1.09
CPNE1-201ENST00000317677 A0A096LNI7 61 aa8.25□□□□□ -1.09
CPNE1-201ENST00000317677 A6NN06 94 aa8.25□□□□□ -1.09
CPNE1-201ENST00000317677 SPANXA2-OT1Q8N9U9 137 aa8.25□□□□□ -1.09
CPNE1-201ENST00000317677 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
CPNE1-201ENST00000317677 CHKB-CPT1BH3BT56 60 aa8.24□□□□□ -1.09
CPNE1-201ENST00000317677 Q6ZR54 194 aa8.24□□□□□ -1.09
CPNE1-201ENST00000317677 NKAPP1Q8N9T2 125 aa8.24□□□□□ -1.09
CPNE1-201ENST00000317677 Q9BRP9 147 aa8.24□□□□□ -1.09
CPNE1-201ENST00000317677 Q75L30 129 aa8.23□□□□□ -1.09
CPNE1-201ENST00000317677 KCNQ1DNQ9H478 68 aa8.23□□□□□ -1.09
CPNE1-201ENST00000317677 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
CPNE1-201ENST00000317677 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
CPNE1-201ENST00000317677 C14orf177Q52M58 125 aa8.22□□□□□ -1.09
CPNE1-201ENST00000317677 DNAH6Q9C0G6 4158 aa8.22□□□□□ -1.09
CPNE1-201ENST00000317677 A0A1W2PNN7 141 aa8.21□□□□□ -1.09
CPNE1-201ENST00000317677 RPL37AP8A6NKH3 93 aa8.21□□□□□ -1.09
CPNE1-201ENST00000317677 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
CPNE1-201ENST00000317677 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
CPNE1-201ENST00000317677 LCA10Q71F78 164 aa8.21□□□□□ -1.1
CPNE1-201ENST00000317677 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
CPNE1-201ENST00000317677 CHTF8P0CG12 524 aa8.2□□□□□ -1.1
CPNE1-201ENST00000317677 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
CPNE1-201ENST00000317677 DSCR10P59022 87 aa8.19□□□□□ -1.1
CPNE1-201ENST00000317677 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
CPNE1-201ENST00000317677 ST20-AS1Q8NBB2 130 aa8.19□□□□□ -1.1
CPNE1-201ENST00000317677 EPPK1P58107 5090 aaKnown RBP8.19□□□□□ -1.1
CPNE1-201ENST00000317677 H3BPC8 53 aa8.18□□□□□ -1.1
CPNE1-201ENST00000317677 SPRR1AP35321 89 aa8.18□□□□□ -1.1
CPNE1-201ENST00000317677 LINC00208Q96KT6 92 aa8.18□□□□□ -1.1
CPNE1-201ENST00000317677 A0A087WTM6 91 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 SPRR4Q96PI1 79 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 PANO1I0J062 215 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 MP68P56378 58 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
CPNE1-201ENST00000317677 PRR4Q16378 134 aa8.16□□□□□ -1.1
CPNE1-201ENST00000317677 Q8N377 158 aa8.16□□□□□ -1.1
CPNE1-201ENST00000317677 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
CPNE1-201ENST00000317677 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
CPNE1-201ENST00000317677 BIRC6Q9NR09 4857 aa8.16□□□□□ -1.1
CPNE1-201ENST00000317677 KRTAP11-1Q8IUC1 163 aa8.14□□□□□ -1.11
CPNE1-201ENST00000317677 Q8NBF4 154 aa8.14□□□□□ -1.11
CPNE1-201ENST00000317677 HECTD4Q9Y4D8 3996 aa8.14□□□□□ -1.11
CPNE1-201ENST00000317677 TNP2Q05952 138 aa8.13□□□□□ -1.11
CPNE1-201ENST00000317677 Q6ZRX8 168 aa8.13□□□□□ -1.11
CPNE1-201ENST00000317677 K7EQZ3 153 aa8.12□□□□□ -1.11
CPNE1-201ENST00000317677 A6NED7 52 aa8.11□□□□□ -1.11
CPNE1-201ENST00000317677 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
CPNE1-201ENST00000317677 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
CPNE1-201ENST00000317677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
CPNE1-201ENST00000317677 FRAS1Q86XX4 4008 aa8.1□□□□□ -1.11
CPNE1-201ENST00000317677 C1orf137Q5JT78 98 aa8.1□□□□□ -1.11
CPNE1-201ENST00000317677 REG3GQ6UW15 175 aa8.1□□□□□ -1.11
CPNE1-201ENST00000317677 C8orf87E5RJ46 101 aa8.08□□□□□ -1.12
CPNE1-201ENST00000317677 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
CPNE1-201ENST00000317677 DNAH8Q96JB1 4490 aa8.08□□□□□ -1.12
CPNE1-201ENST00000317677 RTL8CO15255 209 aa8.08□□□□□ -1.12
CPNE1-201ENST00000317677 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
CPNE1-201ENST00000317677 PLAC8Q9NZF1 115 aa8.06□□□□□ -1.12
CPNE1-201ENST00000317677 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
CPNE1-201ENST00000317677 MOBPQ13875 183 aa8.06□□□□□ -1.12
CPNE1-201ENST00000317677 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms