RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
TRIM35-201ENST00000305364 H3BNG1 76 aa8.4□□□□□ -1.06
TRIM35-201ENST00000305364 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
TRIM35-201ENST00000305364 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
TRIM35-201ENST00000305364 CYP4F30PQ9H0H9 118 aa8.38□□□□□ -1.07
TRIM35-201ENST00000305364 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
TRIM35-201ENST00000305364 KRTAP1-1Q07627 177 aa8.36□□□□□ -1.07
TRIM35-201ENST00000305364 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
TRIM35-201ENST00000305364 H3BPC8 53 aa8.35□□□□□ -1.07
TRIM35-201ENST00000305364 CASC10Q5T4H9 136 aa8.35□□□□□ -1.07
TRIM35-201ENST00000305364 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
TRIM35-201ENST00000305364 COA5Q86WW8 74 aa8.34□□□□□ -1.07
TRIM35-201ENST00000305364 KMT2BQ9UMN6 2715 aaPredicted RBP8.33□□□□□ -1.08
TRIM35-201ENST00000305364 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
TRIM35-201ENST00000305364 CD164Q04900 197 aa8.33□□□□□ -1.08
TRIM35-201ENST00000305364 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
TRIM35-201ENST00000305364 PLA2G2DQ9UNK4 145 aa8.32□□□□□ -1.08
TRIM35-201ENST00000305364 IGHV6-1A0A0B4J1U7 121 aa8.31□□□□□ -1.08
TRIM35-201ENST00000305364 DNAH10OSP0CZ25 163 aa8.31□□□□□ -1.08
TRIM35-201ENST00000305364 A8MWP4 228 aa8.3□□□□□ -1.08
TRIM35-201ENST00000305364 ZCCHC13Q8WW36 166 aaKnown RBP8.3□□□□□ -1.08
TRIM35-201ENST00000305364 TNP2Q05952 138 aa8.3□□□□□ -1.08
TRIM35-201ENST00000305364 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
TRIM35-201ENST00000305364 Q5VV11 94 aa8.29□□□□□ -1.08
TRIM35-201ENST00000305364 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
TRIM35-201ENST00000305364 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
TRIM35-201ENST00000305364 SPINK6Q6UWN8 80 aa8.28□□□□□ -1.08
TRIM35-201ENST00000305364 ZNF706Q9Y5V0 76 aaPredicted RBP8.28□□□□□ -1.08
TRIM35-201ENST00000305364 SPRR1AP35321 89 aa8.27□□□□□ -1.09
TRIM35-201ENST00000305364 PHF5AQ7RTV0 110 aaKnown RBP8.27□□□□□ -1.09
TRIM35-201ENST00000305364 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
TRIM35-201ENST00000305364 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
TRIM35-201ENST00000305364 ATP11AUNQ6ZP68 121 aa8.26□□□□□ -1.09
TRIM35-201ENST00000305364 LOC101927531A0A1B0GV80 90 aa8.25□□□□□ -1.09
TRIM35-201ENST00000305364 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
TRIM35-201ENST00000305364 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
TRIM35-201ENST00000305364 LCE6AA0A183 80 aa8.25□□□□□ -1.09
TRIM35-201ENST00000305364 A8MU10 97 aa8.25□□□□□ -1.09
TRIM35-201ENST00000305364 C16orf90A8MZG2 172 aa8.24□□□□□ -1.09
TRIM35-201ENST00000305364 C1orf134Q5TEV5 83 aa8.24□□□□□ -1.09
TRIM35-201ENST00000305364 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
TRIM35-201ENST00000305364 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
TRIM35-201ENST00000305364 MDFIQ99750 246 aa8.23□□□□□ -1.09
TRIM35-201ENST00000305364 TP53AIP1Q9HCN2 124 aa8.22□□□□□ -1.09
TRIM35-201ENST00000305364 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.09
TRIM35-201ENST00000305364 KRTAP10-11P60412 298 aa8.19□□□□□ -1.1
TRIM35-201ENST00000305364 RBM12B-AS1Q9P1G2 102 aa8.18□□□□□ -1.1
TRIM35-201ENST00000305364 VWFP04275 2813 aa8.16□□□□□ -1.1
TRIM35-201ENST00000305364 CDC42SE1Q9NRR8 79 aa8.16□□□□□ -1.1
TRIM35-201ENST00000305364 Q75L30 129 aa8.15□□□□□ -1.1
TRIM35-201ENST00000305364 K7EIL1 84 aa8.15□□□□□ -1.1
TRIM35-201ENST00000305364 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.11
TRIM35-201ENST00000305364 MOBPQ13875 183 aa8.14□□□□□ -1.11
TRIM35-201ENST00000305364 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
TRIM35-201ENST00000305364 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
TRIM35-201ENST00000305364 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
TRIM35-201ENST00000305364 KRTAP7-1Q8IUC3 87 aa8.12□□□□□ -1.11
TRIM35-201ENST00000305364 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
TRIM35-201ENST00000305364 LCA10Q71F78 164 aa8.11□□□□□ -1.11
TRIM35-201ENST00000305364 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
TRIM35-201ENST00000305364 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
TRIM35-201ENST00000305364 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
TRIM35-201ENST00000305364 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
TRIM35-201ENST00000305364 IGLV8-61A0A075B6I0 122 aa8.09□□□□□ -1.11
TRIM35-201ENST00000305364 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
TRIM35-201ENST00000305364 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
TRIM35-201ENST00000305364 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
TRIM35-201ENST00000305364 ACYP2P14621 99 aa8.06□□□□□ -1.12
TRIM35-201ENST00000305364 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
TRIM35-201ENST00000305364 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
TRIM35-201ENST00000305364 A0A1B0GU69 56 aa8.05□□□□□ -1.12
TRIM35-201ENST00000305364 SPINK7P58062 85 aa8.05□□□□□ -1.12
TRIM35-201ENST00000305364 PKD1L1Q8TDX9 2849 aa8.04□□□□□ -1.12
TRIM35-201ENST00000305364 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.12
TRIM35-201ENST00000305364 HRES1P13985 223 aa8.02□□□□□ -1.13
TRIM35-201ENST00000305364 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
TRIM35-201ENST00000305364 WWC2-AS2Q96NR7 200 aa8.02□□□□□ -1.13
TRIM35-201ENST00000305364 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
TRIM35-201ENST00000305364 RTL8CO15255 209 aa7.99□□□□□ -1.13
TRIM35-201ENST00000305364 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
TRIM35-201ENST00000305364 PDZD2O15018 2839 aa7.99□□□□□ -1.13
TRIM35-201ENST00000305364 SPRR1BP22528 89 aa7.98□□□□□ -1.13
TRIM35-201ENST00000305364 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
TRIM35-201ENST00000305364 NBPF19A0A087WUL8 3843 aa7.96□□□□□ -1.13
TRIM35-201ENST00000305364 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.14
TRIM35-201ENST00000305364 A6NN06 94 aa7.96□□□□□ -1.14
TRIM35-201ENST00000305364 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
TRIM35-201ENST00000305364 KRTAP11-1Q8IUC1 163 aa7.95□□□□□ -1.14
TRIM35-201ENST00000305364 SPINK1P00995 79 aa7.94□□□□□ -1.14
TRIM35-201ENST00000305364 KRTAP1-5Q9BYS1 174 aa7.94□□□□□ -1.14
TRIM35-201ENST00000305364 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
TRIM35-201ENST00000305364 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
TRIM35-201ENST00000305364 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
TRIM35-201ENST00000305364 LINC00313P59037 77 aa7.92□□□□□ -1.14
TRIM35-201ENST00000305364 Q6ZR54 194 aa7.89□□□□□ -1.15
TRIM35-201ENST00000305364 UQCR11O14957 56 aa7.89□□□□□ -1.15
TRIM35-201ENST00000305364 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
TRIM35-201ENST00000305364 APLNQ9ULZ1 77 aa7.87□□□□□ -1.15
TRIM35-201ENST00000305364 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
TRIM35-201ENST00000305364 ZNF469Q96JG9 3925 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 277.4 ms