RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 STAB1Q9NY15 2570 aa7.31□□□□□ -1.24
TRUB1-201ENST00000298746 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
TRUB1-201ENST00000298746 NSD1Q96L73 2696 aaPredicted RBP7.29□□□□□ -1.24
TRUB1-201ENST00000298746 H3BNG1 76 aa7.29□□□□□ -1.24
TRUB1-201ENST00000298746 NDUFS5O43920 106 aa7.29□□□□□ -1.24
TRUB1-201ENST00000298746 TNP2Q05952 138 aa7.29□□□□□ -1.24
TRUB1-201ENST00000298746 ZCCHC13Q8WW36 166 aaKnown RBP7.29□□□□□ -1.24
TRUB1-201ENST00000298746 A8MU10 97 aa7.27□□□□□ -1.24
TRUB1-201ENST00000298746 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
TRUB1-201ENST00000298746 LCE6AA0A183 80 aa7.25□□□□□ -1.25
TRUB1-201ENST00000298746 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
TRUB1-201ENST00000298746 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
TRUB1-201ENST00000298746 LIMD2Q9BT23 127 aa7.24□□□□□ -1.25
TRUB1-201ENST00000298746 SPRR1AP35321 89 aa7.24□□□□□ -1.25
TRUB1-201ENST00000298746 TLX1NBP0CAT3 122 aa7.24□□□□□ -1.25
TRUB1-201ENST00000298746 DNAH10OSP0CZ25 163 aa7.23□□□□□ -1.25
TRUB1-201ENST00000298746 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
TRUB1-201ENST00000298746 LINC00588Q9Y4M8 146 aa7.23□□□□□ -1.25
TRUB1-201ENST00000298746 Q5VV11 94 aa7.22□□□□□ -1.25
TRUB1-201ENST00000298746 J3QKU1 62 aa7.22□□□□□ -1.25
TRUB1-201ENST00000298746 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
TRUB1-201ENST00000298746 MGAM2Q2M2H8 2515 aa7.21□□□□□ -1.26
TRUB1-201ENST00000298746 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.26
TRUB1-201ENST00000298746 OTOGQ6ZRI0 2925 aa7.21□□□□□ -1.26
TRUB1-201ENST00000298746 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
TRUB1-201ENST00000298746 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
TRUB1-201ENST00000298746 KRTAP10-11P60412 298 aa7.19□□□□□ -1.26
TRUB1-201ENST00000298746 COA5Q86WW8 74 aa7.19□□□□□ -1.26
TRUB1-201ENST00000298746 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
TRUB1-201ENST00000298746 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
TRUB1-201ENST00000298746 UBE2DNLQ8IWF7 75 aa7.19□□□□□ -1.26
TRUB1-201ENST00000298746 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
TRUB1-201ENST00000298746 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
TRUB1-201ENST00000298746 CHTF8P0CG12 524 aa7.18□□□□□ -1.26
TRUB1-201ENST00000298746 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
TRUB1-201ENST00000298746 A8MWP4 228 aa7.17□□□□□ -1.26
TRUB1-201ENST00000298746 C16orf90A8MZG2 172 aa7.17□□□□□ -1.26
TRUB1-201ENST00000298746 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
TRUB1-201ENST00000298746 H3BPC8 53 aa7.16□□□□□ -1.26
TRUB1-201ENST00000298746 FBN1P35555 2871 aaKnown RBP7.15□□□□□ -1.26
TRUB1-201ENST00000298746 SPANXA2-OT1Q8N9U9 137 aa7.15□□□□□ -1.26
TRUB1-201ENST00000298746 ANK3Q12955 4377 aaKnown RBP7.14□□□□□ -1.27
TRUB1-201ENST00000298746 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
TRUB1-201ENST00000298746 CD164Q04900 197 aa7.14□□□□□ -1.27
TRUB1-201ENST00000298746 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
TRUB1-201ENST00000298746 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
TRUB1-201ENST00000298746 LOC101927531A0A1B0GV80 90 aa7.1□□□□□ -1.27
TRUB1-201ENST00000298746 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
TRUB1-201ENST00000298746 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
TRUB1-201ENST00000298746 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.27
TRUB1-201ENST00000298746 LCA10Q71F78 164 aa7.08□□□□□ -1.28
TRUB1-201ENST00000298746 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
TRUB1-201ENST00000298746 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
TRUB1-201ENST00000298746 RBM12B-AS1Q9P1G2 102 aa7.06□□□□□ -1.28
TRUB1-201ENST00000298746 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
TRUB1-201ENST00000298746 MMP24-AS1A0A0U1RRL7 71 aa7.06□□□□□ -1.28
TRUB1-201ENST00000298746 Q75L30 129 aa7.05□□□□□ -1.28
TRUB1-201ENST00000298746 C9orf163Q8N9P6 203 aa7.05□□□□□ -1.28
TRUB1-201ENST00000298746 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
TRUB1-201ENST00000298746 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
TRUB1-201ENST00000298746 C14orf177Q52M58 125 aa7.03□□□□□ -1.28
TRUB1-201ENST00000298746 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
TRUB1-201ENST00000298746 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.28
TRUB1-201ENST00000298746 KMT2BQ9UMN6 2715 aaPredicted RBP7.01□□□□□ -1.29
TRUB1-201ENST00000298746 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
TRUB1-201ENST00000298746 KRTAP1-5Q9BYS1 174 aa7□□□□□ -1.29
TRUB1-201ENST00000298746 TENM2Q9NT68 2774 aa7□□□□□ -1.29
TRUB1-201ENST00000298746 SPINK7P58062 85 aa7□□□□□ -1.29
TRUB1-201ENST00000298746 MOBPQ13875 183 aa7□□□□□ -1.29
TRUB1-201ENST00000298746 COL7A1Q02388 2944 aa7□□□□□ -1.29
TRUB1-201ENST00000298746 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
TRUB1-201ENST00000298746 CSMD3Q7Z407 3707 aa6.99□□□□□ -1.29
TRUB1-201ENST00000298746 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
TRUB1-201ENST00000298746 HRES1P13985 223 aa6.97□□□□□ -1.29
TRUB1-201ENST00000298746 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
TRUB1-201ENST00000298746 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
TRUB1-201ENST00000298746 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
TRUB1-201ENST00000298746 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
TRUB1-201ENST00000298746 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.3
TRUB1-201ENST00000298746 SPRR1BP22528 89 aa6.95□□□□□ -1.3
TRUB1-201ENST00000298746 A6NN06 94 aa6.94□□□□□ -1.3
TRUB1-201ENST00000298746 K7EIL1 84 aa6.93□□□□□ -1.3
TRUB1-201ENST00000298746 CIRBP-AS1Q8TBR5 109 aa6.92□□□□□ -1.3
TRUB1-201ENST00000298746 PANO1I0J062 215 aa6.91□□□□□ -1.3
TRUB1-201ENST00000298746 A0A087X002 238 aa6.91□□□□□ -1.3
TRUB1-201ENST00000298746 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
TRUB1-201ENST00000298746 MDFIQ99750 246 aa6.91□□□□□ -1.3
TRUB1-201ENST00000298746 PRAC1Q96KF2 57 aa6.9□□□□□ -1.31
TRUB1-201ENST00000298746 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
TRUB1-201ENST00000298746 ACYP2P14621 99 aa6.89□□□□□ -1.31
TRUB1-201ENST00000298746 A0A1B0GU69 56 aa6.88□□□□□ -1.31
TRUB1-201ENST00000298746 Q6ZR54 194 aa6.87□□□□□ -1.31
TRUB1-201ENST00000298746 Q96NJ1 140 aa6.86□□□□□ -1.31
TRUB1-201ENST00000298746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
TRUB1-201ENST00000298746 LINC00313P59037 77 aa6.84□□□□□ -1.31
TRUB1-201ENST00000298746 Q5W150 140 aa6.83□□□□□ -1.32
TRUB1-201ENST00000298746 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
TRUB1-201ENST00000298746 NBDYA0A0U1RRE5 68 aa6.82□□□□□ -1.32
TRUB1-201ENST00000298746 WWC2-AS2Q96NR7 200 aa6.8□□□□□ -1.32
TRUB1-201ENST00000298746 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms