RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 GIG44P09565 113 aaPredicted RBP7.92□□□□□ -1.14
SYNGAP1-201ENST00000293748 C1orf134Q5TEV5 83 aa7.92□□□□□ -1.14
SYNGAP1-201ENST00000293748 TENM1Q9UKZ4 2725 aa7.91□□□□□ -1.14
SYNGAP1-201ENST00000293748 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
SYNGAP1-201ENST00000293748 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
SYNGAP1-201ENST00000293748 A8MWP4 228 aa7.9□□□□□ -1.15
SYNGAP1-201ENST00000293748 VPS13CQ709C8 3753 aa7.89□□□□□ -1.15
SYNGAP1-201ENST00000293748 LINC00336Q6ZUF6 198 aa7.89□□□□□ -1.15
SYNGAP1-201ENST00000293748 H7BZZ5 65 aa7.89□□□□□ -1.15
SYNGAP1-201ENST00000293748 K7EQZ3 153 aa7.89□□□□□ -1.15
SYNGAP1-201ENST00000293748 COA5Q86WW8 74 aa7.88□□□□□ -1.15
SYNGAP1-201ENST00000293748 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
SYNGAP1-201ENST00000293748 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
SYNGAP1-201ENST00000293748 RPL37AP61513 92 aaKnown RBP7.87□□□□□ -1.15
SYNGAP1-201ENST00000293748 C16orf90A8MZG2 172 aa7.87□□□□□ -1.15
SYNGAP1-201ENST00000293748 CASC10Q5T4H9 136 aa7.87□□□□□ -1.15
SYNGAP1-201ENST00000293748 Q6ZRP5 223 aa7.86□□□□□ -1.15
SYNGAP1-201ENST00000293748 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
SYNGAP1-201ENST00000293748 CD164Q04900 197 aa7.85□□□□□ -1.15
SYNGAP1-201ENST00000293748 SPACA4Q8TDM5 124 aa7.85□□□□□ -1.15
SYNGAP1-201ENST00000293748 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
SYNGAP1-201ENST00000293748 LINC00313P59037 77 aa7.85□□□□□ -1.15
SYNGAP1-201ENST00000293748 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
SYNGAP1-201ENST00000293748 UQCR11O14957 56 aa7.83□□□□□ -1.16
SYNGAP1-201ENST00000293748 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
SYNGAP1-201ENST00000293748 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
SYNGAP1-201ENST00000293748 LINC01600Q96MT4 127 aa7.82□□□□□ -1.16
SYNGAP1-201ENST00000293748 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
SYNGAP1-201ENST00000293748 IGLV1-50A0A075B6I6 118 aa7.8□□□□□ -1.16
SYNGAP1-201ENST00000293748 DNAH10OSP0CZ25 163 aa7.79□□□□□ -1.16
SYNGAP1-201ENST00000293748 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
SYNGAP1-201ENST00000293748 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
SYNGAP1-201ENST00000293748 PRR34Q9NV39 138 aa7.78□□□□□ -1.16
SYNGAP1-201ENST00000293748 LINC00588Q9Y4M8 146 aa7.78□□□□□ -1.16
SYNGAP1-201ENST00000293748 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
SYNGAP1-201ENST00000293748 APLNQ9ULZ1 77 aa7.77□□□□□ -1.17
SYNGAP1-201ENST00000293748 KTN1-AS1Q86SY8 53 aa7.77□□□□□ -1.17
SYNGAP1-201ENST00000293748 Q8N377 158 aa7.77□□□□□ -1.17
SYNGAP1-201ENST00000293748 SVEP1Q4LDE5 3571 aa7.76□□□□□ -1.17
SYNGAP1-201ENST00000293748 LCE6AA0A183 80 aa7.76□□□□□ -1.17
SYNGAP1-201ENST00000293748 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
SYNGAP1-201ENST00000293748 C8orf17Q9NRJ1 99 aa7.75□□□□□ -1.17
SYNGAP1-201ENST00000293748 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
SYNGAP1-201ENST00000293748 FAM168BA1KXE4 195 aa7.74□□□□□ -1.17
SYNGAP1-201ENST00000293748 LCA10Q71F78 164 aa7.73□□□□□ -1.17
SYNGAP1-201ENST00000293748 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
SYNGAP1-201ENST00000293748 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
SYNGAP1-201ENST00000293748 CHTF8P0CG12 524 aa7.73□□□□□ -1.17
SYNGAP1-201ENST00000293748 C9orf129Q5T035 196 aaKnown RBP7.73□□□□□ -1.17
SYNGAP1-201ENST00000293748 RTL8CO15255 209 aa7.72□□□□□ -1.17
SYNGAP1-201ENST00000293748 OBSCN-AS1Q96MR7 158 aa7.72□□□□□ -1.17
SYNGAP1-201ENST00000293748 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
SYNGAP1-201ENST00000293748 A0A1B0GVX0 72 aa7.7□□□□□ -1.18
SYNGAP1-201ENST00000293748 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
SYNGAP1-201ENST00000293748 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
SYNGAP1-201ENST00000293748 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
SYNGAP1-201ENST00000293748 Q96NJ1 140 aa7.69□□□□□ -1.18
SYNGAP1-201ENST00000293748 TLX1NBP0CAT3 122 aa7.69□□□□□ -1.18
SYNGAP1-201ENST00000293748 VWFP04275 2813 aa7.68□□□□□ -1.18
SYNGAP1-201ENST00000293748 A0A1W2PNM2 257 aa7.67□□□□□ -1.18
SYNGAP1-201ENST00000293748 ANK2Q01484 3957 aa7.67□□□□□ -1.18
SYNGAP1-201ENST00000293748 DNHD1Q96M86 4753 aa7.66□□□□□ -1.18
SYNGAP1-201ENST00000293748 CDC42SE1Q9NRR8 79 aa7.66□□□□□ -1.18
SYNGAP1-201ENST00000293748 CUBNO60494 3623 aa7.65□□□□□ -1.18
SYNGAP1-201ENST00000293748 IGLV5-48A0A075B6I7 105 aa7.64□□□□□ -1.19
SYNGAP1-201ENST00000293748 OCR1Q9BZK8 76 aa7.64□□□□□ -1.19
SYNGAP1-201ENST00000293748 Q1T7F1 81 aa7.63□□□□□ -1.19
SYNGAP1-201ENST00000293748 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
SYNGAP1-201ENST00000293748 TRRAPQ9Y4A5 3859 aa7.61□□□□□ -1.19
SYNGAP1-201ENST00000293748 PKD1L1Q8TDX9 2849 aa7.61□□□□□ -1.19
SYNGAP1-201ENST00000293748 DSCR10P59022 87 aa7.61□□□□□ -1.19
SYNGAP1-201ENST00000293748 ZNF861PO60384 105 aa7.6□□□□□ -1.19
SYNGAP1-201ENST00000293748 A0A0G2JQZ4 141 aa7.59□□□□□ -1.2
SYNGAP1-201ENST00000293748 A0A1W2PNN7 141 aa7.59□□□□□ -1.2
SYNGAP1-201ENST00000293748 STAB2Q8WWQ8 2551 aa7.58□□□□□ -1.2
SYNGAP1-201ENST00000293748 ZNF575Q86XF7 245 aa7.58□□□□□ -1.2
SYNGAP1-201ENST00000293748 C9orf163Q8N9P6 203 aa7.57□□□□□ -1.2
SYNGAP1-201ENST00000293748 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
SYNGAP1-201ENST00000293748 IGLV5-37A0A075B6J1 123 aa7.54□□□□□ -1.2
SYNGAP1-201ENST00000293748 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
SYNGAP1-201ENST00000293748 SPRR4Q96PI1 79 aa7.53□□□□□ -1.2
SYNGAP1-201ENST00000293748 NBEAL2Q6ZNJ1 2754 aa7.53□□□□□ -1.2
SYNGAP1-201ENST00000293748 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
SYNGAP1-201ENST00000293748 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
SYNGAP1-201ENST00000293748 Q5XG85 94 aa7.51□□□□□ -1.21
SYNGAP1-201ENST00000293748 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
SYNGAP1-201ENST00000293748 Q75L30 129 aa7.49□□□□□ -1.21
SYNGAP1-201ENST00000293748 PRR26Q8N8Z3 221 aa7.49□□□□□ -1.21
SYNGAP1-201ENST00000293748 LINC00304Q8N9R0 145 aa7.49□□□□□ -1.21
SYNGAP1-201ENST00000293748 Q6ZR54 194 aa7.48□□□□□ -1.21
SYNGAP1-201ENST00000293748 A0A087WTM6 91 aa7.46□□□□□ -1.22
SYNGAP1-201ENST00000293748 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
SYNGAP1-201ENST00000293748 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
SYNGAP1-201ENST00000293748 RBM12B-AS1Q9P1G2 102 aa7.45□□□□□ -1.22
SYNGAP1-201ENST00000293748 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
SYNGAP1-201ENST00000293748 TGP01266 2768 aa7.45□□□□□ -1.22
SYNGAP1-201ENST00000293748 Q8N9P0 234 aaPredicted RBP7.44□□□□□ -1.22
SYNGAP1-201ENST00000293748 TENM3Q9P273 2699 aa7.43□□□□□ -1.22
SYNGAP1-201ENST00000293748 ANAPC11Q9NYG5 84 aa7.43□□□□□ -1.22
SYNGAP1-201ENST00000293748 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms