RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 NBEAQ8NFP9 2946 aa5.36□□□□□ -1.55
PTPN3-201ENST00000262539 TRBV7-4A0A0J9YYF1 115 aa5.36□□□□□ -1.55
PTPN3-201ENST00000262539 FAM218AQ96MZ4 157 aa5.35□□□□□ -1.55
PTPN3-201ENST00000262539 ASH1LQ9NR48 2969 aaKnown RBP5.35□□□□□ -1.55
PTPN3-201ENST00000262539 C8orf87E5RJ46 101 aa5.35□□□□□ -1.55
PTPN3-201ENST00000262539 NBEAL1Q6ZS30 2694 aa5.35□□□□□ -1.55
PTPN3-201ENST00000262539 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.56
PTPN3-201ENST00000262539 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 COL6A3P12111 3177 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 DMDP11532 3685 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 SPRR1BP22528 89 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 Q6ZQT0 140 aa5.32□□□□□ -1.56
PTPN3-201ENST00000262539 PDZD2O15018 2839 aa5.32□□□□□ -1.56
PTPN3-201ENST00000262539 MXRA5Q9NR99 2828 aa5.32□□□□□ -1.56
PTPN3-201ENST00000262539 FREM2Q5SZK8 3169 aa5.31□□□□□ -1.56
PTPN3-201ENST00000262539 TACC2O95359 2948 aa5.31□□□□□ -1.56
PTPN3-201ENST00000262539 A0A087WTM6 91 aa5.3□□□□□ -1.56
PTPN3-201ENST00000262539 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
PTPN3-201ENST00000262539 MRPL34Q9BQ48 92 aaKnown RBP5.29□□□□□ -1.56
PTPN3-201ENST00000262539 FBN2P35556 2912 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 TENM4Q6N022 2769 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 K7EQZ3 153 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 ZNF861PO60384 105 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 Q6ZSA8 131 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 A8MWP4 228 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 Q6ZR54 194 aa5.26□□□□□ -1.57
PTPN3-201ENST00000262539 H3BPC8 53 aa5.26□□□□□ -1.57
PTPN3-201ENST00000262539 NF1P21359 2839 aa5.25□□□□□ -1.57
PTPN3-201ENST00000262539 A0A0D9SG42 100 aa5.25□□□□□ -1.57
PTPN3-201ENST00000262539 IGLV7-43P04211 117 aa5.24□□□□□ -1.57
PTPN3-201ENST00000262539 SPRR4Q96PI1 79 aa5.23□□□□□ -1.57
PTPN3-201ENST00000262539 NBEAL2Q6ZNJ1 2754 aa5.22□□□□□ -1.57
PTPN3-201ENST00000262539 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
PTPN3-201ENST00000262539 CD164Q04900 197 aa5.22□□□□□ -1.57
PTPN3-201ENST00000262539 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.57
PTPN3-201ENST00000262539 LRBAP50851 2863 aa5.21□□□□□ -1.57
PTPN3-201ENST00000262539 Q8N377 158 aa5.21□□□□□ -1.58
PTPN3-201ENST00000262539 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
PTPN3-201ENST00000262539 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
PTPN3-201ENST00000262539 FAM229BQ4G0N7 80 aa5.2□□□□□ -1.58
PTPN3-201ENST00000262539 OTOGQ6ZRI0 2925 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 CELSR2Q9HCU4 2923 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 PSORS1C2Q9UIG4 136 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 TNP2Q05952 138 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 CASC10Q5T4H9 136 aa5.18□□□□□ -1.58
PTPN3-201ENST00000262539 COA5Q86WW8 74 aa5.18□□□□□ -1.58
PTPN3-201ENST00000262539 Q6ZRN7 208 aaPredicted RBP5.18□□□□□ -1.58
PTPN3-201ENST00000262539 Q8N1X5 172 aa5.17□□□□□ -1.58
PTPN3-201ENST00000262539 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
PTPN3-201ENST00000262539 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
PTPN3-201ENST00000262539 A0A0G2JQZ4 141 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 UQCR11O14957 56 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 Q8NDZ9 215 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.58
PTPN3-201ENST00000262539 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
PTPN3-201ENST00000262539 DCHS2Q6V1P9 2916 aa5.14□□□□□ -1.59
PTPN3-201ENST00000262539 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
PTPN3-201ENST00000262539 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
PTPN3-201ENST00000262539 LINC00483Q53H64 154 aa5.13□□□□□ -1.59
PTPN3-201ENST00000262539 PRR26Q8N8Z3 221 aa5.13□□□□□ -1.59
PTPN3-201ENST00000262539 TENM1Q9UKZ4 2725 aa5.12□□□□□ -1.59
PTPN3-201ENST00000262539 PRR15Q8IV56 129 aa5.12□□□□□ -1.59
PTPN3-201ENST00000262539 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
PTPN3-201ENST00000262539 LOC400499M0QZD8 3231 aa5.11□□□□□ -1.59
PTPN3-201ENST00000262539 ASPMQ8IZT6 3477 aa5.11□□□□□ -1.59
PTPN3-201ENST00000262539 LCE6AA0A183 80 aa5.09□□□□□ -1.6
PTPN3-201ENST00000262539 CELSR3Q9NYQ7 3312 aa5.08□□□□□ -1.6
PTPN3-201ENST00000262539 HRES1P13985 223 aa5.08□□□□□ -1.6
PTPN3-201ENST00000262539 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
PTPN3-201ENST00000262539 TENM3Q9P273 2699 aa5.07□□□□□ -1.6
PTPN3-201ENST00000262539 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
PTPN3-201ENST00000262539 Q5VSD8 79 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 CFAP47Q6ZTR5 3102 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 ASB16-AS1Q495Z4 193 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 Q5XG85 94 aa5.05□□□□□ -1.6
PTPN3-201ENST00000262539 A8MUN3 132 aa5.05□□□□□ -1.6
PTPN3-201ENST00000262539 S4R3F8 94 aa5.05□□□□□ -1.6
PTPN3-201ENST00000262539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
PTPN3-201ENST00000262539 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
PTPN3-201ENST00000262539 SPENQ96T58 3664 aaKnown RBP5.04□□□□□ -1.6
PTPN3-201ENST00000262539 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
PTPN3-201ENST00000262539 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
PTPN3-201ENST00000262539 ZFHX4Q86UP3 3567 aa5.02□□□□□ -1.61
PTPN3-201ENST00000262539 LINC00472Q9H8W2 130 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 CRYBG3Q68DQ2 2970 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 VWFP04275 2813 aa5□□□□□ -1.61
PTPN3-201ENST00000262539 OCR1Q9BZK8 76 aa5□□□□□ -1.61
PTPN3-201ENST00000262539 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
PTPN3-201ENST00000262539 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms