RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PKIGQ9Y2B9 76 aa9.55□□□□□ -0.88
DDX56-201ENST00000258772 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.55□□□□□ -0.88
DDX56-201ENST00000258772 FP248Q71RG6 208 aaPredicted RBP9.54□□□□□ -0.88
DDX56-201ENST00000258772 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
DDX56-201ENST00000258772 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
DDX56-201ENST00000258772 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
DDX56-201ENST00000258772 DNAH9Q9NYC9 4486 aa9.53□□□□□ -0.88
DDX56-201ENST00000258772 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
DDX56-201ENST00000258772 APLNQ9ULZ1 77 aa9.53□□□□□ -0.88
DDX56-201ENST00000258772 C1orf195Q5TG92 126 aa9.52□□□□□ -0.89
DDX56-201ENST00000258772 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
DDX56-201ENST00000258772 A0A087WSZ3 146 aa9.51□□□□□ -0.89
DDX56-201ENST00000258772 HCG22E2RYF7 251 aa9.51□□□□□ -0.89
DDX56-201ENST00000258772 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
DDX56-201ENST00000258772 DEFB116Q30KQ4 102 aa9.51□□□□□ -0.89
DDX56-201ENST00000258772 C14orf177Q52M58 125 aa9.51□□□□□ -0.89
DDX56-201ENST00000258772 UBE2AP49459 152 aa9.51□□□□□ -0.89
DDX56-201ENST00000258772 LINC00474Q9P2X8 69 aa9.5□□□□□ -0.89
DDX56-201ENST00000258772 COL7A1Q02388 2944 aa9.48□□□□□ -0.89
DDX56-201ENST00000258772 H0Y9J4 135 aa9.48□□□□□ -0.89
DDX56-201ENST00000258772 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
DDX56-201ENST00000258772 SPRR1BP22528 89 aa9.47□□□□□ -0.89
DDX56-201ENST00000258772 C9orf163Q8N9P6 203 aa9.47□□□□□ -0.89
DDX56-201ENST00000258772 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
DDX56-201ENST00000258772 LRCOL1A6NCL2 159 aa9.44□□□□□ -0.9
DDX56-201ENST00000258772 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
DDX56-201ENST00000258772 RPL37AP61513 92 aaKnown RBP9.44□□□□□ -0.9
DDX56-201ENST00000258772 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
DDX56-201ENST00000258772 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
DDX56-201ENST00000258772 CSMD3Q7Z407 3707 aa9.43□□□□□ -0.9
DDX56-201ENST00000258772 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
DDX56-201ENST00000258772 TENM2Q9NT68 2774 aa9.4□□□□□ -0.9
DDX56-201ENST00000258772 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
DDX56-201ENST00000258772 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
DDX56-201ENST00000258772 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
DDX56-201ENST00000258772 CD164Q04900 197 aa9.39□□□□□ -0.91
DDX56-201ENST00000258772 H3BS24 57 aa9.38□□□□□ -0.91
DDX56-201ENST00000258772 PANO1I0J062 215 aa9.38□□□□□ -0.91
DDX56-201ENST00000258772 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
DDX56-201ENST00000258772 PRR15Q8IV56 129 aa9.38□□□□□ -0.91
DDX56-201ENST00000258772 hDV103S1A0JD37 113 aa9.37□□□□□ -0.91
DDX56-201ENST00000258772 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
DDX56-201ENST00000258772 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
DDX56-201ENST00000258772 MPLKIPQ8TAP9 179 aa9.36□□□□□ -0.91
DDX56-201ENST00000258772 A8MWP4 228 aa9.35□□□□□ -0.91
DDX56-201ENST00000258772 MP68P56378 58 aa9.35□□□□□ -0.91
DDX56-201ENST00000258772 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
DDX56-201ENST00000258772 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
DDX56-201ENST00000258772 MDFIQ99750 246 aa9.34□□□□□ -0.91
DDX56-201ENST00000258772 PLECQ15149 4684 aaKnown RBP9.33□□□□□ -0.92
DDX56-201ENST00000258772 NDUFB1O75438 58 aa9.32□□□□□ -0.92
DDX56-201ENST00000258772 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
DDX56-201ENST00000258772 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
DDX56-201ENST00000258772 CYP4F30PQ9H0H9 118 aa9.31□□□□□ -0.92
DDX56-201ENST00000258772 TRAV22A0A0B4J277 110 aa9.3□□□□□ -0.92
DDX56-201ENST00000258772 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
DDX56-201ENST00000258772 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
DDX56-201ENST00000258772 PRR4Q16378 134 aa9.29□□□□□ -0.92
DDX56-201ENST00000258772 H0Y9P7 68 aa9.27□□□□□ -0.92
DDX56-201ENST00000258772 H3BPC8 53 aa9.26□□□□□ -0.93
DDX56-201ENST00000258772 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
DDX56-201ENST00000258772 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
DDX56-201ENST00000258772 A0A087WTM6 91 aa9.23□□□□□ -0.93
DDX56-201ENST00000258772 Q1T7F1 81 aa9.23□□□□□ -0.93
DDX56-201ENST00000258772 Q96NJ1 140 aa9.23□□□□□ -0.93
DDX56-201ENST00000258772 PMAIP1Q13794 54 aa9.22□□□□□ -0.93
DDX56-201ENST00000258772 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
DDX56-201ENST00000258772 BRK1Q8WUW1 75 aa9.21□□□□□ -0.93
DDX56-201ENST00000258772 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
DDX56-201ENST00000258772 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
DDX56-201ENST00000258772 HECTD4Q9Y4D8 3996 aa9.19□□□□□ -0.94
DDX56-201ENST00000258772 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
DDX56-201ENST00000258772 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 MOBPQ13875 183 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 WWC2-AS2Q96NR7 200 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
DDX56-201ENST00000258772 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 RTL8CO15255 209 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
DDX56-201ENST00000258772 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
DDX56-201ENST00000258772 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
DDX56-201ENST00000258772 ZNF861PO60384 105 aa9.13□□□□□ -0.95
DDX56-201ENST00000258772 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
DDX56-201ENST00000258772 Q6ZR54 194 aa9.12□□□□□ -0.95
DDX56-201ENST00000258772 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
DDX56-201ENST00000258772 KMT2AQ03164 3969 aa9.12□□□□□ -0.95
DDX56-201ENST00000258772 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
DDX56-201ENST00000258772 A0A1B0GVX0 72 aa9.1□□□□□ -0.95
DDX56-201ENST00000258772 PSPHP1O15172 72 aa9.1□□□□□ -0.95
DDX56-201ENST00000258772 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
DDX56-201ENST00000258772 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
DDX56-201ENST00000258772 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
DDX56-201ENST00000258772 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
DDX56-201ENST00000258772 CDK2AP2O75956 126 aa9.07□□□□□ -0.96
DDX56-201ENST00000258772 DNAH17Q9UFH2 4485 aa9.06□□□□□ -0.96
DDX56-201ENST00000258772 DNAH2Q9P225 4427 aa9.06□□□□□ -0.96
DDX56-201ENST00000258772 NDUFS5O43920 106 aa9.05□□□□□ -0.96
DDX56-201ENST00000258772 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
DDX56-201ENST00000258772 A8MUN3 132 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms