RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 A6NED7 52 aa12.86□□□□□ -0.35
HOXC13-201ENST00000243056 NDUFB1O75438 58 aa12.86□□□□□ -0.35
HOXC13-201ENST00000243056 REG3AQ06141 175 aa12.85□□□□□ -0.35
HOXC13-201ENST00000243056 LINC00208Q96KT6 92 aa12.84□□□□□ -0.35
HOXC13-201ENST00000243056 A0A1W2PNM2 257 aa12.83□□□□□ -0.35
HOXC13-201ENST00000243056 ANGP03950 147 aaKnown RBP12.83□□□□□ -0.35
HOXC13-201ENST00000243056 DNAH7Q8WXX0 4024 aa12.83□□□□□ -0.36
HOXC13-201ENST00000243056 DEFB105AQ8NG35 78 aa12.81□□□□□ -0.36
HOXC13-201ENST00000243056 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
HOXC13-201ENST00000243056 IGLV5-48A0A075B6I7 105 aa12.8□□□□□ -0.36
HOXC13-201ENST00000243056 VPREB1P12018 145 aa12.8□□□□□ -0.36
HOXC13-201ENST00000243056 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
HOXC13-201ENST00000243056 STARD9Q9P2P6 4700 aa12.79□□□□□ -0.36
HOXC13-201ENST00000243056 Q8N377 158 aa12.79□□□□□ -0.36
HOXC13-201ENST00000243056 CDC42SE1Q9NRR8 79 aa12.78□□□□□ -0.36
HOXC13-201ENST00000243056 Q9BRP9 147 aa12.78□□□□□ -0.36
HOXC13-201ENST00000243056 PLECQ15149 4684 aaKnown RBP12.77□□□□□ -0.36
HOXC13-201ENST00000243056 LOC101927531A0A1B0GV80 90 aa12.77□□□□□ -0.37
HOXC13-201ENST00000243056 MOBPQ13875 183 aa12.77□□□□□ -0.37
HOXC13-201ENST00000243056 KCNQ1DNQ9H478 68 aa12.76□□□□□ -0.37
HOXC13-201ENST00000243056 DEFB116Q30KQ4 102 aa12.75□□□□□ -0.37
HOXC13-201ENST00000243056 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
HOXC13-201ENST00000243056 LELP1Q5T871 98 aa12.74□□□□□ -0.37
HOXC13-201ENST00000243056 MP68P56378 58 aa12.72□□□□□ -0.37
HOXC13-201ENST00000243056 SPANXA2-OT1Q8N9U9 137 aa12.72□□□□□ -0.37
HOXC13-201ENST00000243056 H3BNG1 76 aa12.72□□□□□ -0.37
HOXC13-201ENST00000243056 H3BS24 57 aa12.72□□□□□ -0.37
HOXC13-201ENST00000243056 A0A1B0GW54 56 aa12.7□□□□□ -0.38
HOXC13-201ENST00000243056 Q8NBF4 154 aa12.7□□□□□ -0.38
HOXC13-201ENST00000243056 C1orf137Q5JT78 98 aa12.69□□□□□ -0.38
HOXC13-201ENST00000243056 WFDC13Q8IUB5 93 aa12.69□□□□□ -0.38
HOXC13-201ENST00000243056 TNP2Q05952 138 aa12.66□□□□□ -0.38
HOXC13-201ENST00000243056 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
HOXC13-201ENST00000243056 DYNC2H1Q8NCM8 4307 aaKnown RBP12.65□□□□□ -0.38
HOXC13-201ENST00000243056 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
HOXC13-201ENST00000243056 COA5Q86WW8 74 aa12.64□□□□□ -0.39
HOXC13-201ENST00000243056 DNAH10Q8IVF4 4471 aa12.61□□□□□ -0.39
HOXC13-201ENST00000243056 H0Y9P7 68 aa12.61□□□□□ -0.39
HOXC13-201ENST00000243056 IGKV2D-24A0A075B6R9 120 aa12.6□□□□□ -0.39
HOXC13-201ENST00000243056 NKAPP1Q8N9T2 125 aa12.6□□□□□ -0.39
HOXC13-201ENST00000243056 APLNQ9ULZ1 77 aa12.6□□□□□ -0.39
HOXC13-201ENST00000243056 C9orf163Q8N9P6 203 aa12.59□□□□□ -0.39
HOXC13-201ENST00000243056 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
HOXC13-201ENST00000243056 PRAC1Q96KF2 57 aa12.59□□□□□ -0.39
HOXC13-201ENST00000243056 SPINK7P58062 85 aa12.57□□□□□ -0.4
HOXC13-201ENST00000243056 KMT2AQ03164 3969 aa12.56□□□□□ -0.4
HOXC13-201ENST00000243056 LINC00313P59037 77 aa12.56□□□□□ -0.4
HOXC13-201ENST00000243056 PRR34Q9NV39 138 aa12.56□□□□□ -0.4
HOXC13-201ENST00000243056 PLAC8Q9NZF1 115 aa12.56□□□□□ -0.4
HOXC13-201ENST00000243056 CAMK2N2Q96S95 79 aa12.55□□□□□ -0.4
HOXC13-201ENST00000243056 LINC01556Q5JQF7 62 aa12.53□□□□□ -0.4
HOXC13-201ENST00000243056 LINC01558Q9Y6Z2 57 aa12.53□□□□□ -0.4
HOXC13-201ENST00000243056 KRTAP29-1A8MX34 341 aaPredicted RBP12.53□□□□□ -0.4
HOXC13-201ENST00000243056 SPAG11AQ6PDA7 123 aa12.52□□□□□ -0.4
HOXC13-201ENST00000243056 KRTAP1-5Q9BYS1 174 aa12.52□□□□□ -0.4
HOXC13-201ENST00000243056 A0A0G2JQZ4 141 aa12.52□□□□□ -0.41
HOXC13-201ENST00000243056 A0A1W2PNN7 141 aa12.52□□□□□ -0.41
HOXC13-201ENST00000243056 UBE2DNLQ8IWF7 75 aa12.52□□□□□ -0.41
HOXC13-201ENST00000243056 H3BPC8 53 aa12.51□□□□□ -0.41
HOXC13-201ENST00000243056 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
HOXC13-201ENST00000243056 NUPR2A6NF83 97 aa12.5□□□□□ -0.41
HOXC13-201ENST00000243056 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
HOXC13-201ENST00000243056 CASC10Q5T4H9 136 aa12.49□□□□□ -0.41
HOXC13-201ENST00000243056 ADM2Q7Z4H4 148 aa12.48□□□□□ -0.41
HOXC13-201ENST00000243056 KRTAP26-1Q6PEX3 210 aa12.47□□□□□ -0.41
HOXC13-201ENST00000243056 Q6ZRX8 168 aa12.47□□□□□ -0.41
HOXC13-201ENST00000243056 DHRS4-AS1Q9P1J3 65 aa12.46□□□□□ -0.41
HOXC13-201ENST00000243056 IGLV7-46A0A075B6I9 117 aa12.46□□□□□ -0.42
HOXC13-201ENST00000243056 SERTAD4-AS1Q5TG53 156 aa12.46□□□□□ -0.42
HOXC13-201ENST00000243056 VPS13DQ5THJ4 4388 aa12.45□□□□□ -0.42
HOXC13-201ENST00000243056 LINC01554Q52M75 96 aa12.43□□□□□ -0.42
HOXC13-201ENST00000243056 CASC2Q6XLA1 102 aa12.42□□□□□ -0.42
HOXC13-201ENST00000243056 LINC00476Q8WZB0 136 aa12.42□□□□□ -0.42
HOXC13-201ENST00000243056 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
HOXC13-201ENST00000243056 RPL37AP8A6NKH3 93 aa12.4□□□□□ -0.42
HOXC13-201ENST00000243056 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
HOXC13-201ENST00000243056 C15orf56Q8N910 161 aa12.39□□□□□ -0.43
HOXC13-201ENST00000243056 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
HOXC13-201ENST00000243056 A0A087WSZ3 146 aa12.36□□□□□ -0.43
HOXC13-201ENST00000243056 PCOTHQ58A44 107 aa12.36□□□□□ -0.43
HOXC13-201ENST00000243056 IGFL1Q6UW32 110 aa12.36□□□□□ -0.43
HOXC13-201ENST00000243056 WWC2-AS2Q96NR7 200 aa12.36□□□□□ -0.43
HOXC13-201ENST00000243056 PRR26Q8N8Z3 221 aa12.36□□□□□ -0.43
HOXC13-201ENST00000243056 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
HOXC13-201ENST00000243056 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
HOXC13-201ENST00000243056 DNAH2Q9P225 4427 aa12.34□□□□□ -0.43
HOXC13-201ENST00000243056 LY6G6CO95867 125 aa12.32□□□□□ -0.44
HOXC13-201ENST00000243056 NBDYA0A0U1RRE5 68 aa12.3□□□□□ -0.44
HOXC13-201ENST00000243056 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
HOXC13-201ENST00000243056 SPRR1AP35321 89 aa12.3□□□□□ -0.44
HOXC13-201ENST00000243056 FAM168BA1KXE4 195 aa12.28□□□□□ -0.44
HOXC13-201ENST00000243056 HRES1P13985 223 aa12.27□□□□□ -0.44
HOXC13-201ENST00000243056 A8MWP4 228 aa12.21□□□□□ -0.46
HOXC13-201ENST00000243056 KRTAP7-1Q8IUC3 87 aa12.2□□□□□ -0.46
HOXC13-201ENST00000243056 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
HOXC13-201ENST00000243056 MMP24-AS1A0A0U1RRL7 71 aa12.18□□□□□ -0.46
HOXC13-201ENST00000243056 RTL8CO15255 209 aa12.16□□□□□ -0.46
HOXC13-201ENST00000243056 Q6ZR54 194 aa12.15□□□□□ -0.46
HOXC13-201ENST00000243056 PLA2G2DQ9UNK4 145 aa12.15□□□□□ -0.46
HOXC13-201ENST00000243056 LINC00472Q9H8W2 130 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms