RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SMIM29Q86T20 159 aa15.73■□□□□ 0.11
RUNDC3A-201ENST00000225441 PKIGQ9Y2B9 76 aa15.73■□□□□ 0.11
RUNDC3A-201ENST00000225441 IGLV8-61A0A075B6I0 122 aa15.72■□□□□ 0.11
RUNDC3A-201ENST00000225441 PSCAO43653 123 aa15.72■□□□□ 0.11
RUNDC3A-201ENST00000225441 Q6ZR54 194 aa15.72■□□□□ 0.11
RUNDC3A-201ENST00000225441 A0A0U1RQV1 116 aa15.7■□□□□ 0.1
RUNDC3A-201ENST00000225441 A0A096LNI7 61 aa15.68■□□□□ 0.1
RUNDC3A-201ENST00000225441 C5orf47Q569G3 176 aa15.68■□□□□ 0.1
RUNDC3A-201ENST00000225441 Q6ZRN7 208 aaPredicted RBP15.68■□□□□ 0.1
RUNDC3A-201ENST00000225441 H0Y9J4 135 aa15.66■□□□□ 0.1
RUNDC3A-201ENST00000225441 LCE6AA0A183 80 aa15.65■□□□□ 0.1
RUNDC3A-201ENST00000225441 DSCR10P59022 87 aa15.64■□□□□ 0.09
RUNDC3A-201ENST00000225441 Q5XG85 94 aa15.64■□□□□ 0.09
RUNDC3A-201ENST00000225441 ALMS1Q8TCU4 4167 aa15.63■□□□□ 0.09
RUNDC3A-201ENST00000225441 A0A1W2PNN7 141 aa15.61■□□□□ 0.09
RUNDC3A-201ENST00000225441 IGFL1Q6UW32 110 aa15.59■□□□□ 0.09
RUNDC3A-201ENST00000225441 SMIM26A0A096LP01 95 aa15.59■□□□□ 0.09
RUNDC3A-201ENST00000225441 LRCOL1A6NCL2 159 aa15.59■□□□□ 0.09
RUNDC3A-201ENST00000225441 SPRR1BP22528 89 aa15.59■□□□□ 0.09
RUNDC3A-201ENST00000225441 DNAH10Q8IVF4 4471 aa15.58■□□□□ 0.08
RUNDC3A-201ENST00000225441 IGKV2-24A0A0C4DH68 120 aa15.57■□□□□ 0.08
RUNDC3A-201ENST00000225441 C1orf134Q5TEV5 83 aa15.57■□□□□ 0.08
RUNDC3A-201ENST00000225441 PRLHP81277 87 aa15.54■□□□□ 0.08
RUNDC3A-201ENST00000225441 LINC00474Q9P2X8 69 aa15.53■□□□□ 0.08
RUNDC3A-201ENST00000225441 KMT2AQ03164 3969 aa15.52■□□□□ 0.08
RUNDC3A-201ENST00000225441 K7EQZ3 153 aa15.52■□□□□ 0.07
RUNDC3A-201ENST00000225441 DNAH6Q9C0G6 4158 aa15.52■□□□□ 0.07
RUNDC3A-201ENST00000225441 HCG22E2RYF7 251 aa15.51■□□□□ 0.07
RUNDC3A-201ENST00000225441 UBE2AP49459 152 aa15.51■□□□□ 0.07
RUNDC3A-201ENST00000225441 C9orf163Q8N9P6 203 aa15.51■□□□□ 0.07
RUNDC3A-201ENST00000225441 HIGD2AQ9BW72 106 aa15.51■□□□□ 0.07
RUNDC3A-201ENST00000225441 FAM30AQ9NZY2 134 aa15.5■□□□□ 0.07
RUNDC3A-201ENST00000225441 C4orf26Q17RF5 130 aa15.49■□□□□ 0.07
RUNDC3A-201ENST00000225441 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.48■□□□□ 0.07
RUNDC3A-201ENST00000225441 A0A087WTM6 91 aa15.48■□□□□ 0.07
RUNDC3A-201ENST00000225441 PHF5AQ7RTV0 110 aaKnown RBP15.44■□□□□ 0.06
RUNDC3A-201ENST00000225441 ZCCHC13Q8WW36 166 aaKnown RBP15.44■□□□□ 0.06
RUNDC3A-201ENST00000225441 DNAH2Q9P225 4427 aa15.43■□□□□ 0.06
RUNDC3A-201ENST00000225441 A0A087WSZ3 146 aa15.43■□□□□ 0.06
RUNDC3A-201ENST00000225441 HRCT1Q6UXD1 115 aa15.4■□□□□ 0.06
RUNDC3A-201ENST00000225441 RTL8CO15255 209 aa15.39■□□□□ 0.05
RUNDC3A-201ENST00000225441 CHTF8P0CG12 524 aa15.38■□□□□ 0.05
RUNDC3A-201ENST00000225441 FP248Q71RG6 208 aaPredicted RBP15.36■□□□□ 0.05
RUNDC3A-201ENST00000225441 HYDINQ4G0P3 5121 aa15.36■□□□□ 0.05
RUNDC3A-201ENST00000225441 KRTAP11-1Q8IUC1 163 aa15.36■□□□□ 0.05
RUNDC3A-201ENST00000225441 A0A0G2JQZ4 141 aa15.33■□□□□ 0.04
RUNDC3A-201ENST00000225441 NDUFB1O75438 58 aa15.33■□□□□ 0.04
RUNDC3A-201ENST00000225441 KRTAP13-1Q8IUC0 172 aa15.33■□□□□ 0.04
RUNDC3A-201ENST00000225441 SACSQ9NZJ4 4579 aa15.31■□□□□ 0.04
RUNDC3A-201ENST00000225441 KRTAP29-1A8MX34 341 aaPredicted RBP15.31■□□□□ 0.04
RUNDC3A-201ENST00000225441 LINC00472Q9H8W2 130 aa15.3■□□□□ 0.04
RUNDC3A-201ENST00000225441 DNAH17Q9UFH2 4485 aa15.3■□□□□ 0.04
RUNDC3A-201ENST00000225441 A8MWP4 228 aa15.29■□□□□ 0.04
RUNDC3A-201ENST00000225441 H3BPC8 53 aa15.29■□□□□ 0.04
RUNDC3A-201ENST00000225441 PRR15Q8IV56 129 aa15.29■□□□□ 0.04
RUNDC3A-201ENST00000225441 MP68P56378 58 aa15.29■□□□□ 0.04
RUNDC3A-201ENST00000225441 RPL37AP61513 92 aaKnown RBP15.28■□□□□ 0.04
RUNDC3A-201ENST00000225441 DEFB116Q30KQ4 102 aa15.24■□□□□ 0.03
RUNDC3A-201ENST00000225441 CYP4F30PQ9H0H9 118 aa15.24■□□□□ 0.03
RUNDC3A-201ENST00000225441 IGLV5-52A0A0A0MRZ9 124 aa15.24■□□□□ 0.03
RUNDC3A-201ENST00000225441 WFDC13Q8IUB5 93 aa15.23■□□□□ 0.03
RUNDC3A-201ENST00000225441 SPACA4Q8TDM5 124 aa15.23■□□□□ 0.03
RUNDC3A-201ENST00000225441 FRAS1Q86XX4 4008 aa15.23■□□□□ 0.03
RUNDC3A-201ENST00000225441 CASC2Q6XLA1 102 aa15.22■□□□□ 0.03
RUNDC3A-201ENST00000225441 hDV103S1A0JD37 113 aa15.22■□□□□ 0.03
RUNDC3A-201ENST00000225441 KRTAP10-2P60368 255 aa15.17■□□□□ 0.02
RUNDC3A-201ENST00000225441 LINC00483Q53H64 154 aa15.17■□□□□ 0.02
RUNDC3A-201ENST00000225441 ZNF706Q9Y5V0 76 aaPredicted RBP15.17■□□□□ 0.02
RUNDC3A-201ENST00000225441 RYR2Q92736 4967 aa15.15■□□□□ 0.02
RUNDC3A-201ENST00000225441 PANO1I0J062 215 aa15.15■□□□□ 0.02
RUNDC3A-201ENST00000225441 FAM229BQ4G0N7 80 aa15.15■□□□□ 0.02
RUNDC3A-201ENST00000225441 HECTD4Q9Y4D8 3996 aa15.14■□□□□ 0.01
RUNDC3A-201ENST00000225441 TRAV22A0A0B4J277 110 aa15.14■□□□□ 0.01
RUNDC3A-201ENST00000225441 LINC00336Q6ZUF6 198 aa15.14■□□□□ 0.01
RUNDC3A-201ENST00000225441 KMT2CQ8NEZ4 4911 aaKnown RBP15.13■□□□□ 0.01
RUNDC3A-201ENST00000225441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.12■□□□□ 0.01
RUNDC3A-201ENST00000225441 SPANXA2-OT1Q8N9U9 137 aa15.11■□□□□ 0.01
RUNDC3A-201ENST00000225441 C1orf64Q8NEQ6 169 aa15.1■□□□□ 0.01
RUNDC3A-201ENST00000225441 PRO0628Q9UI54 55 aa15.1■□□□□ 0.01
RUNDC3A-201ENST00000225441 DNAH11Q96DT5 4516 aa15.1■□□□□ 0.01
RUNDC3A-201ENST00000225441 FAT2Q9NYQ8 4349 aa15.1■□□□□ 0.01
RUNDC3A-201ENST00000225441 H0Y9P7 68 aa15.08■□□□□ 0.01
RUNDC3A-201ENST00000225441 LINC00208Q96KT6 92 aa15.08■□□□□ 0
RUNDC3A-201ENST00000225441 MMP24-AS1A0A0U1RRL7 71 aa15.06■□□□□ 0
RUNDC3A-201ENST00000225441 Q1T7F1 81 aa15.04■□□□□ -0
RUNDC3A-201ENST00000225441 MOBPQ13875 183 aa15.03■□□□□ -0
RUNDC3A-201ENST00000225441 PLAC8Q9NZF1 115 aa15.03■□□□□ -0
RUNDC3A-201ENST00000225441 ASB16-AS1Q495Z4 193 aa15.02■□□□□ -0
RUNDC3A-201ENST00000225441 TP53AIP1Q9HCN2 124 aa15.02■□□□□ -0
RUNDC3A-201ENST00000225441 MPLKIPQ8TAP9 179 aa15.01□□□□□ -0.01
RUNDC3A-201ENST00000225441 Q96NJ1 140 aa15.01□□□□□ -0.01
RUNDC3A-201ENST00000225441 PKD1P98161 4303 aa15□□□□□ -0.01
RUNDC3A-201ENST00000225441 DNAH5Q8TE73 4624 aa14.99□□□□□ -0.01
RUNDC3A-201ENST00000225441 IGLV9-49A0A0B4J1Y8 123 aa14.99□□□□□ -0.01
RUNDC3A-201ENST00000225441 KRTAP10-1P60331 282 aa14.97□□□□□ -0.01
RUNDC3A-201ENST00000225441 RYR3Q15413 4870 aa14.97□□□□□ -0.01
RUNDC3A-201ENST00000225441 A0A1B0GVY2 172 aa14.96□□□□□ -0.01
RUNDC3A-201ENST00000225441 ZNF861PO60384 105 aa14.96□□□□□ -0.01
RUNDC3A-201ENST00000225441 PSORS1C2Q9UIG4 136 aa14.95□□□□□ -0.02
RUNDC3A-201ENST00000225441 V9GYY9 64 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms