RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Cdkn1aP39689 159 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trappc1Q5NCF2 145 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Lypd1Q8BLC3 141 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Mrpl53Q9D1H8 118 aaKnown RBP10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Wisp2Q9Z0G4 251 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Amn1B8JKV0 258 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Nsun4C4P6S0 806 aaKnown RBP10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 RbpjP31266 526 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Icam2P35330 277 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 YrdcQ3U5F4 280 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Obp2aQ8K1H9 176 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ly6g5bQ8K1T4 194 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Olfr810Q8VFH9 312 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm15294V9GXA7 121 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ighv1-16A0A075B5U1 98 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ighv1-37A0A0A6YW32 117 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 CntfrO88507 372 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tmem95P0DJF3 176 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Svs5P30933 122 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Rbx1P62878 108 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 RhogP84096 191 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 Cd33Q63994 403 aa10.12□□□□□ -0.79
Nup88-203ENSMUST00000108531 SetxA2AKX3 2646 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ighv2-6A0A075B6A7 116 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trav14n-2A0A0G2JDF5 121 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm45623A0A1B0GSF6 103 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm2174F6ZVF2 133 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 LtaP09225 202 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gsx1P31315 261 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Obox7Q4KL20 218 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ang6Q5GAN0 147 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ncor1Q60974 2453 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trdv2-1A0A0G2JGB9 116 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trbv14A0A140T8L9 115 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Defa35E9QLQ1 93 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ebi3O35228 228 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 P0C913 63 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Cox8bP48772 70 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Atp5iQ06185 71 aaKnown RBP10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trdv2-2Q5R1A4 116 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Hyls1Q9CXX0 307 aa10.11□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trav16nA0A075B634 117 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm33815A0A087WNV3 176 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm29644A0A087WPG2 191 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tmem29A2ANF5 204 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tstd1E9PY03 133 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 BC030500E9Q6W0 185 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 P01791 123 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Mfge8P21956 463 aaKnown RBP10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Adam8Q05910 826 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm1968Q3T9I3 115 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Muc15Q8C6Z1 331 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Arpc1aQ9R0Q6 370 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm45213A0A0U1RNZ6 101 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Znf787Q8BIF9 381 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Zc2hc1aQ8BJH1 324 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Olfr1431Q8VF59 312 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tspo2Q9CRZ8 162 aa10.1□□□□□ -0.79
Nup88-203ENSMUST00000108531 AcanQ61282 2132 aaKnown RBP10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ighv1-31A0A0A6YWK5 117 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 NdpP48744 131 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Clec4b2Q67DU8 208 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Rasl10aQ8K5A4 203 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 RpeQ8VEE0 228 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Plrg1Q922V4 513 aaKnown RBP10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Cysrt1Q9D1E4 142 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ceacam15A0A0B4J1L0 234 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm16442D3YZG3 307 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Olfr1367Q8VFG2 316 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tomm6Q9CQN3 74 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 UrahQ9CRB3 118 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 CklfQ9DAS1 152 aa10.09□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm20517G3UVU6 152 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Rps20P60867 119 aaKnown RBP10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr553Q7TRS6 326 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Rnf24Q8BGI1 148 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tmem30bQ8BHG3 353 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tctex1d2Q9CQ66 144 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 CtrlQ9ER05 264 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ube2l6Q9QZU9 153 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr873Q8VFJ0 319 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tmem160Q9D938 188 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Rabac1Q9Z0S9 185 aa10.08□□□□□ -0.8
Nup88-203ENSMUST00000108531 Med12A2AGH6 2190 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 CrebbpP45481 2441 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Znf239P24399 201 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Cacng7P62956 275 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 BtcQ05928 177 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Zzef1Q5SSH7 2924 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Hes7Q8BKT2 225 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr981Q8VEU2 310 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr976Q8VF15 326 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 AhspQ9CY02 102 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ccdc71lE9Q4T4 218 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr235E9Q9Z6 312 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ubald2Q8BQH4 164 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Slc25a16Q8C0K5 332 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 QrfpQ8CE23 124 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Mrpl33Q9CQP0 65 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tppp3Q9CRB6 176 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms