RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Nat8f4G5E8L3 226 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Q497N7 227 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Obp2aQ8K1H9 176 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Rasl10aQ8K5A4 203 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Plrg1Q922V4 513 aaKnown RBP14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 IcosQ9WVS0 200 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Gm28305F6U473 122 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Mamld1P0C6A2 803 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Olfr1243Q8VGM7 305 aa14.36□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Trdv1A0A075B657 112 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Q24JP4 165 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Spink2Q8BMY7 86 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Znf575Q3TXZ1 239 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Igfbpl1Q80W15 270 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Slc25a16Q8C0K5 332 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Olfr1199Q8VF94 310 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 UrahQ9CRB3 118 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Crybb3Q9JJU9 211 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Bex1Q9R224 128 aa14.35□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Lce6aD3YV94 81 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Rhox7bA6PW38 321 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Gm15292L7N231 93 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Defb20Q30KP3 96 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Muc15Q8C6Z1 331 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Lamtor2Q9JHS3 125 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 GlrxQ9QUH0 107 aa14.34□□□□□ -0.11
Ccdc3-201ENSMUST00000027988 Sptbn4E9PX29 2561 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Cd33Q63994 403 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Vmn1r216Q8R257 298 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm15294V9GXA7 121 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Sptbn1Q62261 2363 aaKnown RBP14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Trav6-6A0A075B603 114 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm3512L7N206 146 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 RbpjP31266 526 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Card19Q9D1I2 183 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 TroQ6DIC6 2087 aa14.33□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm15293D3YX02 93 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Scgb1b19F6WYW0 93 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 P01748 117 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm4763Q8CFJ5 196 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Q9DAZ5 108 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Arpc1aQ9R0Q6 370 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Ebi3O35228 228 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Icam2P35330 277 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Col8a1Q00780 744 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 NpbQ8K4P1 119 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Stpg1Q9D2F5 341 aa14.32□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 KprpB2RUR4 657 aa14.31□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm5426J3QNM7 103 aa14.31□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Ubald2Q8BQH4 164 aa14.31□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Tmem129Q8K304 362 aa14.31□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Rnf114Q9ET26 229 aa14.31□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Ubr5Q80TP3 2792 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Ca1P13634 261 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gng7Q61016 68 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 E130116L18RikQ8BMV6 101 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Cysrt1Q9D1E4 142 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Znf239P24399 201 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Ammecr1lQ8JZZ6 310 aa14.3□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Defa22Q8C1N8 93 aa14.29□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Ormdl3Q9CPZ6 153 aa14.29□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Olfr235E9Q9Z6 312 aa14.29□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Wfdc21Q8BTE6 63 aa14.29□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Hyls1Q9CXX0 307 aa14.29□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Mrpl53Q9D1H8 118 aaKnown RBP14.29□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 F2rl1P55086 399 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 BtcQ05928 177 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm10190Q8BSD7 107 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 RpeQ8VEE0 228 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Tmem160Q9D938 188 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Muc4Q8JZM8 3443 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Igkv4-57A0A0A6YYE7 117 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 BC030500E9Q6W0 185 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Clec4b2Q67DU8 208 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Gm9195A0A140LHT4 2805 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Trav23A0A0G2JG17 115 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Obox7Q4KL20 218 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Q9D131 166 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Tmem210Q9D2F0 147 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Tomm40Q9QYA2 361 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Plekhb2Q9QZC7 221 aa14.28□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Trav6n-6A0A075B6B2 114 aa14.27□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Rab1bQ9D1G1 201 aa14.27□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Rab9aQ9R0M6 201 aa14.27□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 PdfS4R2K0 231 aa14.27□□□□□ -0.12
Ccdc3-201ENSMUST00000027988 Armcx4E9PWM3 2356 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Esp23A8R0V5 104 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Cd24P24807 76 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Adam8Q05910 826 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Tppp3Q9CRB6 176 aaKnown RBP14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ube2v1Q9CZY3 147 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Tctex1d1Q9D5I4 173 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 CklfQ9DAS1 152 aa14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Dnajb12Q9QYI4 376 aaKnown RBP14.27□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Trav16nA0A075B634 117 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Ripply2Q2WG76 128 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Trappc1Q5NCF2 145 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Gm5105Q8C6Y9 112 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Olfr810Q8VFH9 312 aa14.26□□□□□ -0.13
Ccdc3-201ENSMUST00000027988 Olfr975Q8VG91 310 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 116.6 ms