RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Q9DAB9 146 aa11□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Olfr954Q9EQB6 314 aa11□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gm27027S4R1M6 97 aa11□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Tcrg-V6A0A075B5Y8 134 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Trdv1A0A075B657 112 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gm6096D3YTY6 151 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ndufb11O09111 151 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gp9O88186 177 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Klk1b4P00757 256 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Tmem256Q5F285 113 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 ErasQ7TN89 227 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Olfr1441Q8VFV3 318 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Sh3bgrl3Q91VW3 93 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Uqcc1Q9CWU6 295 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Aurkaip1Q9DCJ7 200 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 SelenofQ9ERR7 162 aa10.99□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Tex15F8VPN2 2785 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Trav9-2A0A075B647 113 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ighv2-3A0A075B696 115 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ighv5-9-1A0A0A6YVS4 126 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Trav9-4A0A0B4J1K2 113 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Igkv20-101-2A0A0G2JDU3 113 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ighv1-82A0A0G2JEU7 117 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Olfr709-ps1A0A140T8J9 307 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gm21900J3QP38 180 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 P01750 117 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 CryzP47199 331 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ang5Q5GAN1 145 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Bpifb3Q80ZU7 473 aa10.98□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Trbv30A0A0B4J1P1 111 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gm45800A0A1B0GT24 152 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 D830044I16RikA0A1D5RM53 117 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Reg3gO09049 174 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Rnf24Q8BGI1 148 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Rbfox3Q8BIF2 374 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Odf3Q920N1 254 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gpr35Q9ES90 307 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ctnnbip1Q9JJN6 81 aa10.97□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ighv6-4A0A0A6YX19 119 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Igkv1-133A0A0B4J1H8 120 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Mettl23A2AA28 253 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gm7075D3Z497 112 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Ppt1O88531 306 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Gstp1P19157 210 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Olfr1437Q7TQR7 312 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Olfr1373Q7TQT6 311 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Il22ra1Q80XZ4 581 aa10.96□□□□□ -0.65
Ercc1-201ENSMUST00000003645 Igkv4-70A0A0B4J1I5 116 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ino80eA0A0U1RP99 260 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Gm4565A0A140LJ87 301 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Olfr1369-ps1A0A140T8K7 317 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Rsg1A2A825 258 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Tm4sf19E9Q9H8 206 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Gm9964E9Q9S5 144 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 P01739 132 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Snrpd3P62320 126 aaKnown RBP10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ifna11Q61716 190 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Tmed3Q78IS1 221 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Higd1bQ99JY6 98 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Nhp2Q9CRB2 153 aaKnown RBP10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Sec11cQ9D8V7 192 aa10.95□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Smim10l1A0A087WNQ7 89 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Olfr779E9PUS9 130 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Fli1P26323 452 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 CampP51437 172 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 EtdQ80SW5 59 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Q8C3M9 231 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Derl1Q99J56 251 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 SvbpQ99LQ4 66 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Tnfrsf13cQ9D8D0 175 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Fam216aQ9DB54 251 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Atoh7Q9Z2E5 149 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Stab1Q8R4Y4 2571 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Tenm1Q9WTS4 2731 aa10.94□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ighv1-50A0A075B5W1 117 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Igkv4-81A0A0G2JEY5 119 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Olfr715bE9Q725 315 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Znf239P24399 201 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Saa4P31532 130 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Gm16686Q3UMN9 131 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Gm5468Q8C3D3 155 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Gm10118Q8C8J5 116 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Il19Q8CJ70 176 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ly6g5bQ8K1T4 194 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 TctaQ8VEA7 122 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Olfr435Q8VFS3 313 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Olfr715Q8VG49 315 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 V1ra8Q9EQ48 279 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Nbeal2Q6ZQA0 2742 aa10.93□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ighv1-9A0A0A6YW37 117 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ighv8-2A0A0A6YW58 119 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Zfp931A2AHM2 298 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 1810032O08RikE9PZV8 113 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Olfr1185-ps1F6XP16 303 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Fut1O09160 376 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 FusP56959 518 aaKnown RBP10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Crisp3Q03402 241 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Gpr183Q3U6B2 357 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Ldlrad2Q3V0V0 142 aa10.92□□□□□ -0.66
Ercc1-201ENSMUST00000003645 Fam173aQ501J2 229 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms