RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 IGLV5-37A0A075B6J1 123 aa11.14□□□□□ -0.63
PHGDH-234ENST00000642041 C9JAW5 83 aa11.14□□□□□ -0.63
PHGDH-234ENST00000642041 NKAPP1Q8N9T2 125 aa11.14□□□□□ -0.63
PHGDH-234ENST00000642041 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
PHGDH-234ENST00000642041 VPREB1P12018 145 aa11.13□□□□□ -0.63
PHGDH-234ENST00000642041 Q6ZRP5 223 aa11.13□□□□□ -0.63
PHGDH-234ENST00000642041 RPL18AQ02543 176 aaKnown RBP11.12□□□□□ -0.63
PHGDH-234ENST00000642041 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
PHGDH-234ENST00000642041 TEN1Q86WV5 123 aa11.12□□□□□ -0.63
PHGDH-234ENST00000642041 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
PHGDH-234ENST00000642041 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
PHGDH-234ENST00000642041 WFDC2Q14508 124 aa11.1□□□□□ -0.63
PHGDH-234ENST00000642041 DIRC1Q969H9 104 aa11.1□□□□□ -0.63
PHGDH-234ENST00000642041 TRAV23DV6A0A075B6W5 121 aa11.09□□□□□ -0.63
PHGDH-234ENST00000642041 NCR3O14931 201 aa11.09□□□□□ -0.63
PHGDH-234ENST00000642041 OCIAD2Q56VL3 154 aa11.09□□□□□ -0.63
PHGDH-234ENST00000642041 SLPIP03973 132 aa11.08□□□□□ -0.64
PHGDH-234ENST00000642041 Q6ZRN7 208 aaPredicted RBP11.08□□□□□ -0.64
PHGDH-234ENST00000642041 C9orf163Q8N9P6 203 aa11.08□□□□□ -0.64
PHGDH-234ENST00000642041 CLEC2BQ92478 149 aa11.08□□□□□ -0.64
PHGDH-234ENST00000642041 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
PHGDH-234ENST00000642041 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
PHGDH-234ENST00000642041 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
PHGDH-234ENST00000642041 KRTAP29-1A8MX34 341 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-234ENST00000642041 C21orf62-AS1Q17RA5 79 aa11.06□□□□□ -0.64
PHGDH-234ENST00000642041 ETDBQ3ZM63 59 aa11.06□□□□□ -0.64
PHGDH-234ENST00000642041 C6orf99Q4VX62 202 aa11.06□□□□□ -0.64
PHGDH-234ENST00000642041 ZNF73O43830 326 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-234ENST00000642041 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-234ENST00000642041 PRR3P79522 188 aaKnown RBP11.05□□□□□ -0.64
PHGDH-234ENST00000642041 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
PHGDH-234ENST00000642041 KCNQ1DNQ9H478 68 aa11.05□□□□□ -0.64
PHGDH-234ENST00000642041 TRBV10-3A0A0K0K1G6 114 aa11.04□□□□□ -0.64
PHGDH-234ENST00000642041 TMEM256-PLSCR3K7ERE1 68 aa11.04□□□□□ -0.64
PHGDH-234ENST00000642041 GAGE2BQ13066 116 aa11.04□□□□□ -0.64
PHGDH-234ENST00000642041 ORMDL1Q9P0S3 153 aa11.04□□□□□ -0.64
PHGDH-234ENST00000642041 PRYO14603 147 aa11.03□□□□□ -0.64
PHGDH-234ENST00000642041 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
PHGDH-234ENST00000642041 Q8N814 137 aa11.03□□□□□ -0.64
PHGDH-234ENST00000642041 hADV29S1A0JD25 119 aa11.02□□□□□ -0.65
PHGDH-234ENST00000642041 LECT2O14960 151 aa11.02□□□□□ -0.65
PHGDH-234ENST00000642041 SMCPP49901 116 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-234ENST00000642041 LINC00575Q6W349 94 aa11.02□□□□□ -0.65
PHGDH-234ENST00000642041 LINC00167Q96N53 147 aa11.02□□□□□ -0.65
PHGDH-234ENST00000642041 COX7BP24311 80 aa11.01□□□□□ -0.65
PHGDH-234ENST00000642041 A0A087WTM6 91 aa10.99□□□□□ -0.65
PHGDH-234ENST00000642041 JMJD7-PLA2G4BH0Y9G9 81 aa10.99□□□□□ -0.65
PHGDH-234ENST00000642041 ELOF1P60002 83 aaKnown RBP10.99□□□□□ -0.65
PHGDH-234ENST00000642041 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-234ENST00000642041 MRPL55Q7Z7F7 128 aaKnown RBP10.99□□□□□ -0.65
PHGDH-234ENST00000642041 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
PHGDH-234ENST00000642041 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
PHGDH-234ENST00000642041 KRTAP10-1P60331 282 aa10.98□□□□□ -0.65
PHGDH-234ENST00000642041 Q8NDZ9 215 aa10.98□□□□□ -0.65
PHGDH-234ENST00000642041 C22orf24Q9Y442 160 aa10.98□□□□□ -0.65
PHGDH-234ENST00000642041 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
PHGDH-234ENST00000642041 IGLV1-50A0A075B6I6 118 aa10.97□□□□□ -0.65
PHGDH-234ENST00000642041 C7orf33Q8WU49 177 aa10.97□□□□□ -0.65
PHGDH-234ENST00000642041 FAM218AQ96MZ4 157 aa10.97□□□□□ -0.65
PHGDH-234ENST00000642041 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
PHGDH-234ENST00000642041 A0A087WYN8 130 aa10.95□□□□□ -0.66
PHGDH-234ENST00000642041 ACYP1P07311 99 aa10.95□□□□□ -0.66
PHGDH-234ENST00000642041 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-234ENST00000642041 MTURNQ8N3F0 131 aa10.94□□□□□ -0.66
PHGDH-234ENST00000642041 SPRR1AP35321 89 aa10.93□□□□□ -0.66
PHGDH-234ENST00000642041 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
PHGDH-234ENST00000642041 ETDCA0A1B0GVM5 59 aa10.92□□□□□ -0.66
PHGDH-234ENST00000642041 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
PHGDH-234ENST00000642041 A0A096LNI7 61 aa10.91□□□□□ -0.66
PHGDH-234ENST00000642041 FAM240AA0A1B0GVK7 77 aa10.91□□□□□ -0.66
PHGDH-234ENST00000642041 PDE6GP18545 87 aa10.91□□□□□ -0.66
PHGDH-234ENST00000642041 LINC00528Q8N1L1 170 aa10.91□□□□□ -0.66
PHGDH-234ENST00000642041 REG3GQ6UW15 175 aa10.89□□□□□ -0.67
PHGDH-234ENST00000642041 HAMPP81172 84 aa10.88□□□□□ -0.67
PHGDH-234ENST00000642041 FAM19A5Q7Z5A7 132 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-234ENST00000642041 IGKV2-24A0A0C4DH68 120 aa10.87□□□□□ -0.67
PHGDH-234ENST00000642041 Q6ZRX8 168 aa10.87□□□□□ -0.67
PHGDH-234ENST00000642041 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
PHGDH-234ENST00000642041 VPS25Q9BRG1 176 aa10.87□□□□□ -0.67
PHGDH-234ENST00000642041 DNAH8Q96JB1 4490 aa10.86□□□□□ -0.67
PHGDH-234ENST00000642041 H0Y9J4 135 aa10.86□□□□□ -0.67
PHGDH-234ENST00000642041 OBSCN-AS1Q96MR7 158 aa10.86□□□□□ -0.67
PHGDH-234ENST00000642041 IGLV5-52A0A0A0MRZ9 124 aa10.85□□□□□ -0.67
PHGDH-234ENST00000642041 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
PHGDH-234ENST00000642041 PLA2G1BP04054 148 aaKnown RBP10.85□□□□□ -0.67
PHGDH-234ENST00000642041 LRP2P98164 4655 aa10.84□□□□□ -0.67
PHGDH-234ENST00000642041 FAM168BA1KXE4 195 aa10.83□□□□□ -0.68
PHGDH-234ENST00000642041 B5MCH6 92 aa10.83□□□□□ -0.68
PHGDH-234ENST00000642041 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-234ENST00000642041 Q6ZQY7 126 aa10.83□□□□□ -0.68
PHGDH-234ENST00000642041 UBE2BP63146 152 aa10.82□□□□□ -0.68
PHGDH-234ENST00000642041 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
PHGDH-234ENST00000642041 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
PHGDH-234ENST00000642041 OXTP01178 125 aa10.81□□□□□ -0.68
PHGDH-234ENST00000642041 RBM3P98179 157 aaKnown RBP10.81□□□□□ -0.68
PHGDH-234ENST00000642041 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
PHGDH-234ENST00000642041 KRTAP7-1Q8IUC3 87 aa10.8□□□□□ -0.68
PHGDH-234ENST00000642041 LAMTOR3Q9UHA4 124 aa10.8□□□□□ -0.68
PHGDH-234ENST00000642041 DSCR8Q96T75 97 aa10.78□□□□□ -0.68
PHGDH-234ENST00000642041 A0A1B0GW54 56 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms