RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	CSMD3	Q7Z407	3707 aa		10.99	□□□□□ -0.65
PHGDH-223	ENST00000641597	LINC00528	Q8N1L1	170 aa		10.99	□□□□□ -0.65
PHGDH-223	ENST00000641597	RPL37AP8	A6NKH3	93 aa		10.98	□□□□□ -0.65
PHGDH-223	ENST00000641597	DEFB105A	Q8NG35	78 aa		10.98	□□□□□ -0.65
PHGDH-223	ENST00000641597	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	10.97	□□□□□ -0.65
PHGDH-223	ENST00000641597	DNAH10	Q8IVF4	4471 aa		10.97	□□□□□ -0.65
PHGDH-223	ENST00000641597	TRBV7-4	A0A0J9YYF1	115 aa		10.96	□□□□□ -0.66
PHGDH-223	ENST00000641597	LINC00588	Q9Y4M8	146 aa		10.96	□□□□□ -0.66
PHGDH-223	ENST00000641597	ATP5EP2	Q5VTU8	51 aa		10.95	□□□□□ -0.66
PHGDH-223	ENST00000641597	C7orf33	Q8WU49	177 aa		10.95	□□□□□ -0.66
PHGDH-223	ENST00000641597	TRAV10	A0A0B4J240	114 aa		10.95	□□□□□ -0.66
PHGDH-223	ENST00000641597	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.94	□□□□□ -0.66
PHGDH-223	ENST00000641597		Q8N9L7	120 aa		10.93	□□□□□ -0.66
PHGDH-223	ENST00000641597	DNAH1	Q9P2D7	4330 aa		10.92	□□□□□ -0.66
PHGDH-223	ENST00000641597	DNAH10OS	P0CZ25	163 aa		10.92	□□□□□ -0.66
PHGDH-223	ENST00000641597	NKAPP1	Q8N9T2	125 aa		10.92	□□□□□ -0.66
PHGDH-223	ENST00000641597	SRRM2	Q9UQ35	2752 aa	Known RBP	10.92	□□□□□ -0.66
PHGDH-223	ENST00000641597	KRTAP7-1	Q8IUC3	87 aa		10.91	□□□□□ -0.66
PHGDH-223	ENST00000641597	C20orf197	Q8N268	126 aa		10.9	□□□□□ -0.66
PHGDH-223	ENST00000641597	TRBV7-6	A0A0J9YX20	115 aa		10.89	□□□□□ -0.67
PHGDH-223	ENST00000641597	C3orf84	H3BNL1	204 aa		10.89	□□□□□ -0.67
PHGDH-223	ENST00000641597		Q8N377	158 aa		10.87	□□□□□ -0.67
PHGDH-223	ENST00000641597	ST20-AS1	Q8NBB2	130 aa		10.87	□□□□□ -0.67
PHGDH-223	ENST00000641597	KCNQ1DN	Q9H478	68 aa		10.87	□□□□□ -0.67
PHGDH-223	ENST00000641597		Q9BRP9	147 aa		10.86	□□□□□ -0.67
PHGDH-223	ENST00000641597	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.86	□□□□□ -0.67
PHGDH-223	ENST00000641597	PDE6G	P18545	87 aa		10.85	□□□□□ -0.67
PHGDH-223	ENST00000641597	DNAH9	Q9NYC9	4486 aa		10.84	□□□□□ -0.67
PHGDH-223	ENST00000641597	OXT	P01178	125 aa		10.83	□□□□□ -0.68
PHGDH-223	ENST00000641597		K7EIL1	84 aa		10.82	□□□□□ -0.68
PHGDH-223	ENST00000641597	ERC2-IT1	O76042	136 aa		10.82	□□□□□ -0.68
PHGDH-223	ENST00000641597	SNURF	Q9Y675	71 aa		10.82	□□□□□ -0.68
PHGDH-223	ENST00000641597	BPY2	O14599	106 aa		10.81	□□□□□ -0.68
PHGDH-223	ENST00000641597	CXCL6	P80162	114 aa		10.81	□□□□□ -0.68
PHGDH-223	ENST00000641597	TM2D3	Q9BRN9	247 aa		10.81	□□□□□ -0.68
PHGDH-223	ENST00000641597		A0A0G2JQZ4	141 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597		A0A1W2PNN7	141 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597	IGLV1-50	A0A075B6I6	118 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597		H3BQ85	93 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597		Q6ZRX8	168 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597	DPH3	Q96FX2	82 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597	KRTAP1-5	Q9BYS1	174 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597	DNAH7	Q8WXX0	4024 aa		10.8	□□□□□ -0.68
PHGDH-223	ENST00000641597	TMEM258	P61165	79 aa		10.78	□□□□□ -0.68
PHGDH-223	ENST00000641597		J3KT08	172 aa		10.77	□□□□□ -0.68
PHGDH-223	ENST00000641597	RMI2	Q96E14	147 aa		10.77	□□□□□ -0.68
PHGDH-223	ENST00000641597	TLX1NB	P0CAT3	122 aa		10.77	□□□□□ -0.69
PHGDH-223	ENST00000641597	ETDC	A0A1B0GVM5	59 aa		10.76	□□□□□ -0.69
PHGDH-223	ENST00000641597	TRAV7	A0A075B6U4	112 aa		10.75	□□□□□ -0.69
PHGDH-223	ENST00000641597	IGKV2-24	A0A0C4DH68	120 aa		10.75	□□□□□ -0.69
PHGDH-223	ENST00000641597	NREP	Q16612	68 aa		10.75	□□□□□ -0.69
PHGDH-223	ENST00000641597		A0A1W2PNM2	257 aa		10.74	□□□□□ -0.69
PHGDH-223	ENST00000641597		F8WDY8	70 aa		10.74	□□□□□ -0.69
PHGDH-223	ENST00000641597	MRPL55	Q7Z7F7	128 aa	Known RBP	10.74	□□□□□ -0.69
PHGDH-223	ENST00000641597	IGKV4-1	P06312	121 aa		10.73	□□□□□ -0.69
PHGDH-223	ENST00000641597	SPRR1A	P35321	89 aa		10.72	□□□□□ -0.69
PHGDH-223	ENST00000641597	UBE2B	P63146	152 aa		10.72	□□□□□ -0.69
PHGDH-223	ENST00000641597	IGLV5-48	A0A075B6I7	105 aa		10.72	□□□□□ -0.69
PHGDH-223	ENST00000641597		H7BZZ5	65 aa		10.72	□□□□□ -0.69
PHGDH-223	ENST00000641597	PLA2G2D	Q9UNK4	145 aa		10.71	□□□□□ -0.69
PHGDH-223	ENST00000641597	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.7	□□□□□ -0.7
PHGDH-223	ENST00000641597		A0A096LNI7	61 aa		10.7	□□□□□ -0.7
PHGDH-223	ENST00000641597	DHRS4-AS1	Q9P1J3	65 aa		10.7	□□□□□ -0.7
PHGDH-223	ENST00000641597	PRY	O14603	147 aa		10.7	□□□□□ -0.7
PHGDH-223	ENST00000641597	C1orf137	Q5JT78	98 aa		10.7	□□□□□ -0.7
PHGDH-223	ENST00000641597	PRLH	P81277	87 aa		10.69	□□□□□ -0.7
PHGDH-223	ENST00000641597	IGLV5-37	A0A075B6J1	123 aa		10.69	□□□□□ -0.7
PHGDH-223	ENST00000641597	TNP2	Q05952	138 aa		10.68	□□□□□ -0.7
PHGDH-223	ENST00000641597	CHTF8	P0CG12	524 aa		10.67	□□□□□ -0.7
PHGDH-223	ENST00000641597	RPS28	P62857	69 aa	Known RBP	10.66	□□□□□ -0.7
PHGDH-223	ENST00000641597		F8WEM9	126 aa		10.66	□□□□□ -0.7
PHGDH-223	ENST00000641597	KRTAP11-1	Q8IUC1	163 aa		10.66	□□□□□ -0.7
PHGDH-223	ENST00000641597	REG3G	Q6UW15	175 aa		10.65	□□□□□ -0.7
PHGDH-223	ENST00000641597	KLKP1	Q107X0	134 aa		10.64	□□□□□ -0.71
PHGDH-223	ENST00000641597	FAM236D	A0A1B0GTK5	79 aa		10.64	□□□□□ -0.71
PHGDH-223	ENST00000641597	FAM236C	P0DP71	79 aa		10.64	□□□□□ -0.71
PHGDH-223	ENST00000641597	FUS	P35637	526 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
PHGDH-223	ENST00000641597	SMIM29	Q86T20	159 aa		10.64	□□□□□ -0.71
PHGDH-223	ENST00000641597	DEFB116	Q30KQ4	102 aa		10.63	□□□□□ -0.71
PHGDH-223	ENST00000641597	PSCA	O43653	123 aa		10.62	□□□□□ -0.71
PHGDH-223	ENST00000641597	PLEC	Q15149	4684 aa	Known RBP	10.61	□□□□□ -0.71
PHGDH-223	ENST00000641597	BCE1	O60756	84 aa		10.61	□□□□□ -0.71
PHGDH-223	ENST00000641597		Q8NBF4	154 aa		10.61	□□□□□ -0.71
PHGDH-223	ENST00000641597	HIGD2A	Q9BW72	106 aa		10.61	□□□□□ -0.71
PHGDH-223	ENST00000641597	LINC00476	Q8WZB0	136 aa		10.6	□□□□□ -0.71
PHGDH-223	ENST00000641597	OCR1	Q9BZK8	76 aa		10.6	□□□□□ -0.71
PHGDH-223	ENST00000641597	C4orf26	Q17RF5	130 aa		10.59	□□□□□ -0.71
PHGDH-223	ENST00000641597	TMEM254	Q8TBM7	123 aa		10.59	□□□□□ -0.71
PHGDH-223	ENST00000641597	FAM30A	Q9NZY2	134 aa		10.59	□□□□□ -0.71
PHGDH-223	ENST00000641597	PHF5A	Q7RTV0	110 aa	Known RBP	10.58	□□□□□ -0.72
PHGDH-223	ENST00000641597	UBE2DNL	Q8IWF7	75 aa		10.58	□□□□□ -0.72
PHGDH-223	ENST00000641597	DSCR10	P59022	87 aa		10.57	□□□□□ -0.72
PHGDH-223	ENST00000641597		K7EQZ3	153 aa		10.57	□□□□□ -0.72
PHGDH-223	ENST00000641597	C16orf90	A8MZG2	172 aa		10.56	□□□□□ -0.72
PHGDH-223	ENST00000641597		Q5XG85	94 aa		10.56	□□□□□ -0.72
PHGDH-223	ENST00000641597	IGFL1	Q6UW32	110 aa		10.55	□□□□□ -0.72
PHGDH-223	ENST00000641597	SPRR4	Q96PI1	79 aa		10.54	□□□□□ -0.72
PHGDH-223	ENST00000641597	APLN	Q9ULZ1	77 aa		10.53	□□□□□ -0.72
PHGDH-223	ENST00000641597	EPM2A	B3EWF7	344 aa		10.53	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms