RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 M0QXV9 152 aa6.15□□□□□ -1.42
PHGDH-222ENST00000641587 S100A7L2Q5SY68 101 aa6.15□□□□□ -1.42
PHGDH-222ENST00000641587 MUC2Q02817 5179 aa6.15□□□□□ -1.42
PHGDH-222ENST00000641587 A0A1W2PNN7 141 aa6.14□□□□□ -1.43
PHGDH-222ENST00000641587 K7ERJ3 54 aa6.14□□□□□ -1.43
PHGDH-222ENST00000641587 M0R378 163 aa6.14□□□□□ -1.43
PHGDH-222ENST00000641587 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 IGKV2-28A0A075B6P5 120 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 TRAV13-2A0A0B4J235 113 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 H7C2G1 150 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 IGKV2D-28P01615 120 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 CFC1BP0CG36 223 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 CFC1P0CG37 223 aa6.13□□□□□ -1.43
PHGDH-222ENST00000641587 RPL13AP40429 203 aaKnown RBP6.13□□□□□ -1.43
PHGDH-222ENST00000641587 UBE2BP63146 152 aa6.12□□□□□ -1.43
PHGDH-222ENST00000641587 Q1RN00 199 aa6.12□□□□□ -1.43
PHGDH-222ENST00000641587 LBHQ53QV2 105 aaPredicted RBP6.12□□□□□ -1.43
PHGDH-222ENST00000641587 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
PHGDH-222ENST00000641587 LINC00337Q8N6G1 96 aa6.12□□□□□ -1.43
PHGDH-222ENST00000641587 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
PHGDH-222ENST00000641587 C22orf24Q9Y442 160 aa6.12□□□□□ -1.43
PHGDH-222ENST00000641587 PHF5AQ7RTV0 110 aaKnown RBP6.11□□□□□ -1.43
PHGDH-222ENST00000641587 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
PHGDH-222ENST00000641587 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
PHGDH-222ENST00000641587 TRBV10-3A0A0K0K1G6 114 aa6.1□□□□□ -1.43
PHGDH-222ENST00000641587 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
PHGDH-222ENST00000641587 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
PHGDH-222ENST00000641587 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
PHGDH-222ENST00000641587 A0A1B0GWB2 263 aa6.09□□□□□ -1.43
PHGDH-222ENST00000641587 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
PHGDH-222ENST00000641587 TRAV23DV6A0A075B6W5 121 aa6.08□□□□□ -1.44
PHGDH-222ENST00000641587 IGLV6-57P01721 117 aa6.08□□□□□ -1.44
PHGDH-222ENST00000641587 COL5A1-AS1Q5SY13 56 aa6.08□□□□□ -1.44
PHGDH-222ENST00000641587 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
PHGDH-222ENST00000641587 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
PHGDH-222ENST00000641587 CBY1Q9Y3M2 126 aa6.08□□□□□ -1.44
PHGDH-222ENST00000641587 TSPAN13O95857 204 aa6.07□□□□□ -1.44
PHGDH-222ENST00000641587 PSMB2P49721 201 aa6.07□□□□□ -1.44
PHGDH-222ENST00000641587 IGLV1-50A0A075B6I6 118 aa6.06□□□□□ -1.44
PHGDH-222ENST00000641587 PRYO14603 147 aa6.06□□□□□ -1.44
PHGDH-222ENST00000641587 C1orf137Q5JT78 98 aa6.06□□□□□ -1.44
PHGDH-222ENST00000641587 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
PHGDH-222ENST00000641587 NAA38Q9BRA0 125 aaKnown RBP6.06□□□□□ -1.44
PHGDH-222ENST00000641587 DIRC1Q969H9 104 aa6.05□□□□□ -1.44
PHGDH-222ENST00000641587 ETDCA0A1B0GVM5 59 aa6.04□□□□□ -1.44
PHGDH-222ENST00000641587 ZNF73O43830 326 aaPredicted RBP6.04□□□□□ -1.44
PHGDH-222ENST00000641587 C6orf99Q4VX62 202 aa6.04□□□□□ -1.44
PHGDH-222ENST00000641587 KRTAP11-1Q8IUC1 163 aa6.04□□□□□ -1.44
PHGDH-222ENST00000641587 KCNQ1DNQ9H478 68 aa6.04□□□□□ -1.44
PHGDH-222ENST00000641587 H3BUT2 72 aa6.03□□□□□ -1.44
PHGDH-222ENST00000641587 TAX1BP3O14907 124 aa6.03□□□□□ -1.44
PHGDH-222ENST00000641587 TRIAP1O43715 76 aa6.03□□□□□ -1.44
PHGDH-222ENST00000641587 SCGB1C2P0DMR2 95 aa6.03□□□□□ -1.44
PHGDH-222ENST00000641587 RPL28P46779 137 aaKnown RBP6.03□□□□□ -1.44
PHGDH-222ENST00000641587 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
PHGDH-222ENST00000641587 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
PHGDH-222ENST00000641587 COX6CP09669 75 aa6.02□□□□□ -1.45
PHGDH-222ENST00000641587 VAMP3Q15836 100 aa6.02□□□□□ -1.45
PHGDH-222ENST00000641587 FAM19A1Q7Z5A9 133 aa6.02□□□□□ -1.45
PHGDH-222ENST00000641587 IGLV7-43P04211 117 aa6.01□□□□□ -1.45
PHGDH-222ENST00000641587 COX7BP24311 80 aa6.01□□□□□ -1.45
PHGDH-222ENST00000641587 UBE2AP49459 152 aa6.01□□□□□ -1.45
PHGDH-222ENST00000641587 PRR4Q16378 134 aa6.01□□□□□ -1.45
PHGDH-222ENST00000641587 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
PHGDH-222ENST00000641587 H0Y9J4 135 aa6□□□□□ -1.45
PHGDH-222ENST00000641587 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
PHGDH-222ENST00000641587 BCE1O60756 84 aa5.99□□□□□ -1.45
PHGDH-222ENST00000641587 FABP2P12104 132 aa5.99□□□□□ -1.45
PHGDH-222ENST00000641587 SPRR1AP35321 89 aa5.99□□□□□ -1.45
PHGDH-222ENST00000641587 PRLHP81277 87 aa5.99□□□□□ -1.45
PHGDH-222ENST00000641587 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
PHGDH-222ENST00000641587 A0A1W2PPM0 123 aa5.98□□□□□ -1.45
PHGDH-222ENST00000641587 B5MCH6 92 aa5.98□□□□□ -1.45
PHGDH-222ENST00000641587 H0YGX0 51 aa5.98□□□□□ -1.45
PHGDH-222ENST00000641587 ELOF1P60002 83 aaKnown RBP5.98□□□□□ -1.45
PHGDH-222ENST00000641587 CLEC2BQ92478 149 aa5.98□□□□□ -1.45
PHGDH-222ENST00000641587 SLC25A20O43772 301 aa5.97□□□□□ -1.45
PHGDH-222ENST00000641587 Q6ZRX8 168 aa5.97□□□□□ -1.45
PHGDH-222ENST00000641587 KRTAP4-16G5E9R7 235 aaPredicted RBP5.96□□□□□ -1.46
PHGDH-222ENST00000641587 SNCGO76070 127 aa5.96□□□□□ -1.46
PHGDH-222ENST00000641587 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
PHGDH-222ENST00000641587 HIGD2AQ9BW72 106 aa5.96□□□□□ -1.46
PHGDH-222ENST00000641587 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
PHGDH-222ENST00000641587 LINC00575Q6W349 94 aa5.95□□□□□ -1.46
PHGDH-222ENST00000641587 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
PHGDH-222ENST00000641587 DHRS4-AS1Q9P1J3 65 aa5.95□□□□□ -1.46
PHGDH-222ENST00000641587 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
PHGDH-222ENST00000641587 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
PHGDH-222ENST00000641587 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
PHGDH-222ENST00000641587 TCL1BO95988 128 aa5.94□□□□□ -1.46
PHGDH-222ENST00000641587 ATXN8Q156A1 80 aa5.94□□□□□ -1.46
PHGDH-222ENST00000641587 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
PHGDH-222ENST00000641587 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
PHGDH-222ENST00000641587 DNAL4O96015 105 aa5.93□□□□□ -1.46
PHGDH-222ENST00000641587 Q9BRP9 147 aa5.93□□□□□ -1.46
PHGDH-222ENST00000641587 LST1O00453 97 aa5.92□□□□□ -1.46
PHGDH-222ENST00000641587 ZNF861PO60384 105 aa5.92□□□□□ -1.46
PHGDH-222ENST00000641587 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms