RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SCGB1C2P0DMR2 95 aa12.39□□□□□ -0.43
PHGDH-210ENST00000641115 HAMPP81172 84 aa12.38□□□□□ -0.43
PHGDH-210ENST00000641115 VAMP3Q15836 100 aa12.38□□□□□ -0.43
PHGDH-210ENST00000641115 REG3GQ6UW15 175 aa12.38□□□□□ -0.43
PHGDH-210ENST00000641115 FABP2P12104 132 aa12.37□□□□□ -0.43
PHGDH-210ENST00000641115 SPRR1AP35321 89 aa12.35□□□□□ -0.43
PHGDH-210ENST00000641115 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
PHGDH-210ENST00000641115 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
PHGDH-210ENST00000641115 PKHD1P08F94 4074 aa12.35□□□□□ -0.43
PHGDH-210ENST00000641115 TRBV7-6A0A0J9YX20 115 aa12.34□□□□□ -0.43
PHGDH-210ENST00000641115 ETDCA0A1B0GVM5 59 aa12.34□□□□□ -0.43
PHGDH-210ENST00000641115 H0YGX0 51 aa12.34□□□□□ -0.43
PHGDH-210ENST00000641115 COX7BP24311 80 aa12.33□□□□□ -0.44
PHGDH-210ENST00000641115 ELOF1P60002 83 aaKnown RBP12.32□□□□□ -0.44
PHGDH-210ENST00000641115 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-210ENST00000641115 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
PHGDH-210ENST00000641115 FAM19A1Q7Z5A9 133 aa12.29□□□□□ -0.44
PHGDH-210ENST00000641115 SPCS1Q9Y6A9 102 aa12.29□□□□□ -0.44
PHGDH-210ENST00000641115 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
PHGDH-210ENST00000641115 XGP55808 180 aa12.29□□□□□ -0.44
PHGDH-210ENST00000641115 Q6ZRX8 168 aa12.29□□□□□ -0.44
PHGDH-210ENST00000641115 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
PHGDH-210ENST00000641115 B5MCH6 92 aa12.28□□□□□ -0.44
PHGDH-210ENST00000641115 BCE1O60756 84 aa12.28□□□□□ -0.44
PHGDH-210ENST00000641115 A0A1B0GV90 55 aa12.27□□□□□ -0.44
PHGDH-210ENST00000641115 TCL1BO95988 128 aa12.27□□□□□ -0.44
PHGDH-210ENST00000641115 LINC00528Q8N1L1 170 aa12.27□□□□□ -0.44
PHGDH-210ENST00000641115 DNAH8Q96JB1 4490 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 ATXN8Q156A1 80 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 SLC25A20O43772 301 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 SNCGO76070 127 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 LINC00575Q6W349 94 aa12.26□□□□□ -0.45
PHGDH-210ENST00000641115 LST1O00453 97 aa12.25□□□□□ -0.45
PHGDH-210ENST00000641115 UBE2AP49459 152 aa12.25□□□□□ -0.45
PHGDH-210ENST00000641115 PRLHP81277 87 aa12.24□□□□□ -0.45
PHGDH-210ENST00000641115 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
PHGDH-210ENST00000641115 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
PHGDH-210ENST00000641115 K7EP34 96 aa12.23□□□□□ -0.45
PHGDH-210ENST00000641115 DYNC1H1Q14204 4646 aaKnown RBP12.23□□□□□ -0.45
PHGDH-210ENST00000641115 A0A1B0GX51 115 aa12.22□□□□□ -0.45
PHGDH-210ENST00000641115 H0Y9J4 135 aa12.22□□□□□ -0.45
PHGDH-210ENST00000641115 DHRS4-AS1Q9P1J3 65 aa12.22□□□□□ -0.45
PHGDH-210ENST00000641115 hADV29S1A0JD25 119 aa12.22□□□□□ -0.45
PHGDH-210ENST00000641115 INAFM2P0DMQ5 153 aa12.22□□□□□ -0.45
PHGDH-210ENST00000641115 DNAL4O96015 105 aa12.21□□□□□ -0.46
PHGDH-210ENST00000641115 TRACP01848 142 aa12.21□□□□□ -0.46
PHGDH-210ENST00000641115 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
PHGDH-210ENST00000641115 Q9BRP9 147 aa12.2□□□□□ -0.46
PHGDH-210ENST00000641115 H3BMG7 143 aa12.19□□□□□ -0.46
PHGDH-210ENST00000641115 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
PHGDH-210ENST00000641115 SMR3BP02814 79 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-210ENST00000641115 IGLV7-43P04211 117 aa12.17□□□□□ -0.46
PHGDH-210ENST00000641115 KRTAP13-1Q8IUC0 172 aa12.17□□□□□ -0.46
PHGDH-210ENST00000641115 SMCR5Q8TEV8 140 aa12.17□□□□□ -0.46
PHGDH-210ENST00000641115 RPL37AP61513 92 aaKnown RBP12.15□□□□□ -0.46
PHGDH-210ENST00000641115 ZNF861PO60384 105 aa12.15□□□□□ -0.47
PHGDH-210ENST00000641115 Q6ZQY7 126 aa12.14□□□□□ -0.47
PHGDH-210ENST00000641115 C9JAW5 83 aa12.13□□□□□ -0.47
PHGDH-210ENST00000641115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-210ENST00000641115 ERC2-IT1O76042 136 aa12.11□□□□□ -0.47
PHGDH-210ENST00000641115 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
PHGDH-210ENST00000641115 ORMDL1Q9P0S3 153 aa12.11□□□□□ -0.47
PHGDH-210ENST00000641115 OCIAD2Q56VL3 154 aa12.09□□□□□ -0.47
PHGDH-210ENST00000641115 MTURNQ8N3F0 131 aa12.09□□□□□ -0.47
PHGDH-210ENST00000641115 APOBP04114 4563 aaKnown RBP12.09□□□□□ -0.47
PHGDH-210ENST00000641115 GHRHP01286 108 aa12.08□□□□□ -0.48
PHGDH-210ENST00000641115 BIRC6Q9NR09 4857 aa12.07□□□□□ -0.48
PHGDH-210ENST00000641115 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
PHGDH-210ENST00000641115 ST20-AS1Q8NBB2 130 aa12.06□□□□□ -0.48
PHGDH-210ENST00000641115 H3BQ85 93 aa12.04□□□□□ -0.48
PHGDH-210ENST00000641115 H3BT86 120 aa12.04□□□□□ -0.48
PHGDH-210ENST00000641115 BAALC-AS2P0C853 105 aa12.04□□□□□ -0.48
PHGDH-210ENST00000641115 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
PHGDH-210ENST00000641115 F8W1H4 67 aa12.04□□□□□ -0.48
PHGDH-210ENST00000641115 PLA2G1BP04054 148 aaKnown RBP12.04□□□□□ -0.48
PHGDH-210ENST00000641115 ZNF706Q9Y5V0 76 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-210ENST00000641115 IGLV5-48A0A075B6I7 105 aa12.03□□□□□ -0.48
PHGDH-210ENST00000641115 TMEM256-PLSCR3K7ERE1 68 aa12.03□□□□□ -0.48
PHGDH-210ENST00000641115 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
PHGDH-210ENST00000641115 ANKRD29Q8N6D5 301 aa12.02□□□□□ -0.49
PHGDH-210ENST00000641115 PPDPFLQ8WWR9 84 aa12.01□□□□□ -0.49
PHGDH-210ENST00000641115 TEX49A0A1B0GTD5 131 aa12□□□□□ -0.49
PHGDH-210ENST00000641115 LINC01547P58512 204 aaPredicted RBP12□□□□□ -0.49
PHGDH-210ENST00000641115 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-210ENST00000641115 Q5VSD8 79 aa11.99□□□□□ -0.49
PHGDH-210ENST00000641115 GAGE2AQ6NT46 116 aa11.99□□□□□ -0.49
PHGDH-210ENST00000641115 Q8N377 158 aa11.99□□□□□ -0.49
PHGDH-210ENST00000641115 SPRR4Q96PI1 79 aa11.99□□□□□ -0.49
PHGDH-210ENST00000641115 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-210ENST00000641115 SPINK6Q6UWN8 80 aa11.98□□□□□ -0.49
PHGDH-210ENST00000641115 LINC01600Q96MT4 127 aa11.96□□□□□ -0.5
PHGDH-210ENST00000641115 SPRR1BP22528 89 aa11.95□□□□□ -0.5
PHGDH-210ENST00000641115 LAMTOR3Q9UHA4 124 aa11.94□□□□□ -0.5
PHGDH-210ENST00000641115 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
PHGDH-210ENST00000641115 RYR1P21817 5038 aa11.93□□□□□ -0.5
PHGDH-210ENST00000641115 LINC00483Q53H64 154 aa11.93□□□□□ -0.5
PHGDH-210ENST00000641115 Q8N1X5 172 aa11.93□□□□□ -0.5
PHGDH-210ENST00000641115 NDUFV3P56181 108 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms