RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TM2D3Q9BRN9 247 aa10.87□□□□□ -0.67
HNRNPU-228ENST00000640306 TRAV7A0A075B6U4 112 aa10.87□□□□□ -0.67
HNRNPU-228ENST00000640306 SERTAD4-AS1Q5TG53 156 aa10.85□□□□□ -0.67
HNRNPU-228ENST00000640306 CXCL6P80162 114 aa10.85□□□□□ -0.67
HNRNPU-228ENST00000640306 RPL37AP8A6NKH3 93 aa10.85□□□□□ -0.67
HNRNPU-228ENST00000640306 C4orf26Q17RF5 130 aa10.84□□□□□ -0.67
HNRNPU-228ENST00000640306 H7BZZ5 65 aa10.84□□□□□ -0.67
HNRNPU-228ENST00000640306 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
HNRNPU-228ENST00000640306 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
HNRNPU-228ENST00000640306 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
HNRNPU-228ENST00000640306 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
HNRNPU-228ENST00000640306 DEFB131BA0A096LNP1 70 aa10.82□□□□□ -0.68
HNRNPU-228ENST00000640306 H3BQ85 93 aa10.82□□□□□ -0.68
HNRNPU-228ENST00000640306 BPY2O14599 106 aa10.81□□□□□ -0.68
HNRNPU-228ENST00000640306 TRBV7-6A0A0J9YX20 115 aa10.81□□□□□ -0.68
HNRNPU-228ENST00000640306 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
HNRNPU-228ENST00000640306 C7orf33Q8WU49 177 aa10.81□□□□□ -0.68
HNRNPU-228ENST00000640306 F8WEM9 126 aa10.8□□□□□ -0.68
HNRNPU-228ENST00000640306 NREPQ16612 68 aa10.79□□□□□ -0.68
HNRNPU-228ENST00000640306 CASC10Q5T4H9 136 aa10.79□□□□□ -0.68
HNRNPU-228ENST00000640306 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
HNRNPU-228ENST00000640306 H3BNG1 76 aa10.77□□□□□ -0.69
HNRNPU-228ENST00000640306 Q8N377 158 aa10.77□□□□□ -0.69
HNRNPU-228ENST00000640306 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
HNRNPU-228ENST00000640306 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.69
HNRNPU-228ENST00000640306 WIPF1O43516 503 aa10.76□□□□□ -0.69
HNRNPU-228ENST00000640306 Q5XG85 94 aa10.76□□□□□ -0.69
HNRNPU-228ENST00000640306 PRB2P02812 416 aaPredicted RBP10.75□□□□□ -0.69
HNRNPU-228ENST00000640306 CMYA5Q8N3K9 4069 aa10.75□□□□□ -0.69
HNRNPU-228ENST00000640306 KLKP1Q107X0 134 aa10.75□□□□□ -0.69
HNRNPU-228ENST00000640306 ST20-AS1Q8NBB2 130 aa10.75□□□□□ -0.69
HNRNPU-228ENST00000640306 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
HNRNPU-228ENST00000640306 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
HNRNPU-228ENST00000640306 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
HNRNPU-228ENST00000640306 BCE1O60756 84 aa10.72□□□□□ -0.69
HNRNPU-228ENST00000640306 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.69
HNRNPU-228ENST00000640306 Q9BRP9 147 aa10.71□□□□□ -0.69
HNRNPU-228ENST00000640306 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
HNRNPU-228ENST00000640306 TMEM254Q8TBM7 123 aa10.69□□□□□ -0.7
HNRNPU-228ENST00000640306 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
HNRNPU-228ENST00000640306 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
HNRNPU-228ENST00000640306 A0A1W2PNN7 141 aa10.68□□□□□ -0.7
HNRNPU-228ENST00000640306 ERC2-IT1O76042 136 aa10.68□□□□□ -0.7
HNRNPU-228ENST00000640306 Q6ZRX8 168 aa10.68□□□□□ -0.7
HNRNPU-228ENST00000640306 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
HNRNPU-228ENST00000640306 A0A1W2PNM2 257 aa10.67□□□□□ -0.7
HNRNPU-228ENST00000640306 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
HNRNPU-228ENST00000640306 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
HNRNPU-228ENST00000640306 SERP1Q9Y6X1 66 aa10.67□□□□□ -0.7
HNRNPU-228ENST00000640306 DNAH10OSP0CZ25 163 aa10.65□□□□□ -0.7
HNRNPU-228ENST00000640306 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
HNRNPU-228ENST00000640306 UBE2BP63146 152 aa10.65□□□□□ -0.7
HNRNPU-228ENST00000640306 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
HNRNPU-228ENST00000640306 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■□□□□ 8.5
HNRNPU-228ENST00000640306 MDFIQ99750 246 aa10.64□□□□□ -0.71
HNRNPU-228ENST00000640306 CSMD3Q7Z407 3707 aa10.64□□□□□ -0.71
HNRNPU-228ENST00000640306 FAM30AQ9NZY2 134 aa10.64□□□□□ -0.71
HNRNPU-228ENST00000640306 IGLV5-48A0A075B6I7 105 aa10.64□□□□□ -0.71
HNRNPU-228ENST00000640306 DHRS4-AS1Q9P1J3 65 aa10.63□□□□□ -0.71
HNRNPU-228ENST00000640306 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
HNRNPU-228ENST00000640306 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
HNRNPU-228ENST00000640306 OCR1Q9BZK8 76 aa10.62□□□□□ -0.71
HNRNPU-228ENST00000640306 KRTAP4-16G5E9R7 235 aaPredicted RBP10.61□□□□□ -0.71
HNRNPU-228ENST00000640306 LINC00474Q9P2X8 69 aa10.61□□□□□ -0.71
HNRNPU-228ENST00000640306 SRRM2Q9UQ35 2752 aaKnown RBP10.61□□□□□ -0.71
HNRNPU-228ENST00000640306 DNAH10Q8IVF4 4471 aa10.6□□□□□ -0.71
HNRNPU-228ENST00000640306 LYSTQ99698 3801 aa10.6□□□□□ -0.71
HNRNPU-228ENST00000640306 MRPL55Q7Z7F7 128 aaKnown RBP10.6□□□□□ -0.71
HNRNPU-228ENST00000640306 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
HNRNPU-228ENST00000640306 F8WDY8 70 aa10.58□□□□□ -0.72
HNRNPU-228ENST00000640306 PRYO14603 147 aa10.58□□□□□ -0.72
HNRNPU-228ENST00000640306 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
HNRNPU-228ENST00000640306 DEFB116Q30KQ4 102 aa10.58□□□□□ -0.72
HNRNPU-228ENST00000640306 EPM2AB3EWF7 344 aa10.57□□□□□ -0.72
HNRNPU-228ENST00000640306 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
HNRNPU-228ENST00000640306 NDUFC1O43677 76 aa10.56□□□□□ -0.72
HNRNPU-228ENST00000640306 TNP2Q05952 138 aa10.56□□□□□ -0.72
HNRNPU-228ENST00000640306 Q8NBF4 154 aa10.56□□□□□ -0.72
HNRNPU-228ENST00000640306 SPRR1AP35321 89 aa10.56□□□□□ -0.72
HNRNPU-228ENST00000640306 DNAH3Q8TD57 4116 aa10.55□□□□□ -0.72
HNRNPU-228ENST00000640306 PRLHP81277 87 aa10.55□□□□□ -0.72
HNRNPU-228ENST00000640306 A0A0U1RQV1 116 aa10.54□□□□□ -0.72
HNRNPU-228ENST00000640306 K7EQZ3 153 aa10.54□□□□□ -0.72
HNRNPU-228ENST00000640306 PLA2G2DQ9UNK4 145 aa10.54□□□□□ -0.72
HNRNPU-228ENST00000640306 FAM229BQ4G0N7 80 aa10.54□□□□□ -0.72
HNRNPU-228ENST00000640306 STAB2Q8WWQ8 2551 aa10.53□□□□□ -0.72
HNRNPU-228ENST00000640306 TENM2Q9NT68 2774 aa10.53□□□□□ -0.72
HNRNPU-228ENST00000640306 DNAH1Q9P2D7 4330 aa10.53□□□□□ -0.72
HNRNPU-228ENST00000640306 REG3GQ6UW15 175 aa10.52□□□□□ -0.72
HNRNPU-228ENST00000640306 DSCR10P59022 87 aa10.52□□□□□ -0.73
HNRNPU-228ENST00000640306 SMIM26A0A096LP01 95 aa10.51□□□□□ -0.73
HNRNPU-228ENST00000640306 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
HNRNPU-228ENST00000640306 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
HNRNPU-228ENST00000640306 IGLV5-37A0A075B6J1 123 aa10.51□□□□□ -0.73
HNRNPU-228ENST00000640306 K7EIL1 84 aa10.51□□□□□ -0.73
HNRNPU-228ENST00000640306 LINC00336Q6ZUF6 198 aa10.51□□□□□ -0.73
HNRNPU-228ENST00000640306 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.49□□□□□ -0.73
HNRNPU-228ENST00000640306 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
HNRNPU-228ENST00000640306 A0A096LNI7 61 aa10.49□□□□□ -0.73
HNRNPU-228ENST00000640306 SPRR4Q96PI1 79 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms