RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 ZNF861PO60384 105 aa12.09□□□□□ -0.47
KCNMA1-278ENST00000640141 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
KCNMA1-278ENST00000640141 KRTAP10-3P60369 221 aa12.07□□□□□ -0.48
KCNMA1-278ENST00000640141 C4orf26Q17RF5 130 aa12.07□□□□□ -0.48
KCNMA1-278ENST00000640141 TLX1NBP0CAT3 122 aa12.06□□□□□ -0.48
KCNMA1-278ENST00000640141 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
KCNMA1-278ENST00000640141 C9orf129Q5T035 196 aaKnown RBP12.06□□□□□ -0.48
KCNMA1-278ENST00000640141 IGLV8-61A0A075B6I0 122 aa12.05□□□□□ -0.48
KCNMA1-278ENST00000640141 A0A087WTM6 91 aa12.05□□□□□ -0.48
KCNMA1-278ENST00000640141 PLA2G2DQ9UNK4 145 aa12.05□□□□□ -0.48
KCNMA1-278ENST00000640141 PRR15Q8IV56 129 aa12.04□□□□□ -0.48
KCNMA1-278ENST00000640141 C8orf17Q9NRJ1 99 aa12.04□□□□□ -0.48
KCNMA1-278ENST00000640141 PRRC2CQ9Y520 2896 aaKnown RBP12.04□□□□□ -0.48
KCNMA1-278ENST00000640141 LINC00304Q8N9R0 145 aa12.04□□□□□ -0.48
KCNMA1-278ENST00000640141 Q8N377 158 aa12.03□□□□□ -0.48
KCNMA1-278ENST00000640141 DSCR10P59022 87 aa12□□□□□ -0.49
KCNMA1-278ENST00000640141 COA5Q86WW8 74 aa12□□□□□ -0.49
KCNMA1-278ENST00000640141 A0A1B0GVX0 72 aa11.99□□□□□ -0.49
KCNMA1-278ENST00000640141 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-278ENST00000640141 LINC01600Q96MT4 127 aa11.98□□□□□ -0.49
KCNMA1-278ENST00000640141 MAST4O15021 2626 aa11.95□□□□□ -0.5
KCNMA1-278ENST00000640141 COX6B2Q6YFQ2 88 aa11.93□□□□□ -0.5
KCNMA1-278ENST00000640141 CYP4F30PQ9H0H9 118 aa11.93□□□□□ -0.5
KCNMA1-278ENST00000640141 OBSCN-AS1Q96MR7 158 aa11.93□□□□□ -0.5
KCNMA1-278ENST00000640141 ATRQ13535 2644 aa11.92□□□□□ -0.5
KCNMA1-278ENST00000640141 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
KCNMA1-278ENST00000640141 UQCR11O14957 56 aa11.91□□□□□ -0.5
KCNMA1-278ENST00000640141 CNBPP62633 177 aaKnown RBP11.91□□□□□ -0.5
KCNMA1-278ENST00000640141 APLNQ9ULZ1 77 aa11.9□□□□□ -0.5
KCNMA1-278ENST00000640141 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
KCNMA1-278ENST00000640141 KLKP1Q107X0 134 aa11.9□□□□□ -0.5
KCNMA1-278ENST00000640141 A0A1W2PNN7 141 aa11.89□□□□□ -0.51
KCNMA1-278ENST00000640141 A8MUN3 132 aa11.89□□□□□ -0.51
KCNMA1-278ENST00000640141 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
KCNMA1-278ENST00000640141 ZNF575Q86XF7 245 aa11.88□□□□□ -0.51
KCNMA1-278ENST00000640141 PSORS1C2Q9UIG4 136 aa11.88□□□□□ -0.51
KCNMA1-278ENST00000640141 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-278ENST00000640141 A0A0G2JQZ4 141 aa11.87□□□□□ -0.51
KCNMA1-278ENST00000640141 C9orf92A6NGG3 77 aa11.87□□□□□ -0.51
KCNMA1-278ENST00000640141 SPRR4Q96PI1 79 aa11.86□□□□□ -0.51
KCNMA1-278ENST00000640141 ANAPC11Q9NYG5 84 aa11.85□□□□□ -0.51
KCNMA1-278ENST00000640141 CASC10Q5T4H9 136 aa11.85□□□□□ -0.51
KCNMA1-278ENST00000640141 KRTAP1-1Q07627 177 aa11.84□□□□□ -0.51
KCNMA1-278ENST00000640141 HELZ2Q9BYK8 2649 aaKnown RBP11.82□□□□□ -0.52
KCNMA1-278ENST00000640141 FLNAP21333 2647 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-278ENST00000640141 A0A1W2PNM2 257 aa11.8□□□□□ -0.52
KCNMA1-278ENST00000640141 SPINT4Q6UDR6 99 aa11.79□□□□□ -0.52
KCNMA1-278ENST00000640141 IGLV5-37A0A075B6J1 123 aa11.78□□□□□ -0.52
KCNMA1-278ENST00000640141 MIR22HGQ0VDD5 57 aa11.77□□□□□ -0.53
KCNMA1-278ENST00000640141 ITPR3Q14573 2671 aa11.74□□□□□ -0.53
KCNMA1-278ENST00000640141 BPTFQ12830 3046 aa11.73□□□□□ -0.53
KCNMA1-278ENST00000640141 H7BZZ5 65 aa11.73□□□□□ -0.53
KCNMA1-278ENST00000640141 IGLV5-48A0A075B6I7 105 aa11.73□□□□□ -0.53
KCNMA1-278ENST00000640141 RBM12B-AS1Q9P1G2 102 aa11.73□□□□□ -0.53
KCNMA1-278ENST00000640141 CRIPTQ9P021 101 aa11.71□□□□□ -0.53
KCNMA1-278ENST00000640141 SPANXA2-OT1Q8N9U9 137 aa11.67□□□□□ -0.54
KCNMA1-278ENST00000640141 FAM104AQ969W3 186 aa11.64□□□□□ -0.55
KCNMA1-278ENST00000640141 DNAH12Q6ZR08 3092 aa11.63□□□□□ -0.55
KCNMA1-278ENST00000640141 CFAP46Q8IYW2 2715 aa11.63□□□□□ -0.55
KCNMA1-278ENST00000640141 CD164Q04900 197 aa11.62□□□□□ -0.55
KCNMA1-278ENST00000640141 TNP2Q05952 138 aa11.61□□□□□ -0.55
KCNMA1-278ENST00000640141 Q8N1X5 172 aa11.59□□□□□ -0.55
KCNMA1-278ENST00000640141 CENPEQ02224 2701 aa11.57□□□□□ -0.56
KCNMA1-278ENST00000640141 WIPF1O43516 503 aa11.56□□□□□ -0.56
KCNMA1-278ENST00000640141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.52□□□□□ -0.57
KCNMA1-278ENST00000640141 STAB1Q9NY15 2570 aa11.52□□□□□ -0.57
KCNMA1-278ENST00000640141 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
KCNMA1-278ENST00000640141 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
KCNMA1-278ENST00000640141 OCR1Q9BZK8 76 aa11.5□□□□□ -0.57
KCNMA1-278ENST00000640141 CDC42SE1Q9NRR8 79 aa11.49□□□□□ -0.57
KCNMA1-278ENST00000640141 CR1P17927 2039 aa11.48□□□□□ -0.57
KCNMA1-278ENST00000640141 A0A0D9SG42 100 aa11.47□□□□□ -0.57
KCNMA1-278ENST00000640141 Q6ZSA8 131 aa11.47□□□□□ -0.57
KCNMA1-278ENST00000640141 FAM229BQ4G0N7 80 aa11.47□□□□□ -0.57
KCNMA1-278ENST00000640141 PRR26Q8N8Z3 221 aa11.45□□□□□ -0.58
KCNMA1-278ENST00000640141 IGLV7-46A0A075B6I9 117 aa11.45□□□□□ -0.58
KCNMA1-278ENST00000640141 KTN1-AS1Q86SY8 53 aa11.4□□□□□ -0.58
KCNMA1-278ENST00000640141 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
KCNMA1-278ENST00000640141 CHD7Q9P2D1 2997 aa11.4□□□□□ -0.58
KCNMA1-278ENST00000640141 SETXQ7Z333 2677 aaKnown RBP11.37□□□□□ -0.59
KCNMA1-278ENST00000640141 LCA10Q71F78 164 aa11.37□□□□□ -0.59
KCNMA1-278ENST00000640141 SPRR1AP35321 89 aa11.36□□□□□ -0.59
KCNMA1-278ENST00000640141 HRES1P13985 223 aa11.35□□□□□ -0.59
KCNMA1-278ENST00000640141 TEP1Q99973 2627 aaKnown RBP11.34□□□□□ -0.59
KCNMA1-278ENST00000640141 AKAP13Q12802 2813 aa11.33□□□□□ -0.6
KCNMA1-278ENST00000640141 Q1T7F1 81 aa11.32□□□□□ -0.6
KCNMA1-278ENST00000640141 MMP24-AS1A0A0U1RRL7 71 aa11.3□□□□□ -0.6
KCNMA1-278ENST00000640141 UTRNP46939 3433 aa11.29□□□□□ -0.6
KCNMA1-278ENST00000640141 A0A1B0GU33 70 aa11.28□□□□□ -0.6
KCNMA1-278ENST00000640141 ZCCHC13Q8WW36 166 aaKnown RBP11.28□□□□□ -0.6
KCNMA1-278ENST00000640141 Q8NDZ9 215 aa11.27□□□□□ -0.6
KCNMA1-278ENST00000640141 SPRR1BP22528 89 aa11.27□□□□□ -0.61
KCNMA1-278ENST00000640141 TEX15Q9BXT5 2789 aa11.26□□□□□ -0.61
KCNMA1-278ENST00000640141 ZNF292O60281 2723 aa11.25□□□□□ -0.61
KCNMA1-278ENST00000640141 CAMK2N1Q7Z7J9 78 aa11.24□□□□□ -0.61
KCNMA1-278ENST00000640141 CHD9Q3L8U1 2897 aa11.23□□□□□ -0.61
KCNMA1-278ENST00000640141 COL6A5A8TX70 2615 aa11.23□□□□□ -0.61
KCNMA1-278ENST00000640141 CHD6Q8TD26 2715 aa11.21□□□□□ -0.61
KCNMA1-278ENST00000640141 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-278ENST00000640141 M0R2T5 61 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms