RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SPATA45Q537H7 98 aa9.85□□□□□ -0.83
COLCA2-206ENST00000638573 ETDCA0A1B0GVM5 59 aa9.84□□□□□ -0.83
COLCA2-206ENST00000638573 LINC00518Q8N0U6 118 aa9.84□□□□□ -0.83
COLCA2-206ENST00000638573 OR13C6PQ8NH95 151 aa9.84□□□□□ -0.83
COLCA2-206ENST00000638573 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
COLCA2-206ENST00000638573 IGLV6-57P01721 117 aa9.83□□□□□ -0.84
COLCA2-206ENST00000638573 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
COLCA2-206ENST00000638573 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
COLCA2-206ENST00000638573 MUSTN1Q8IVN3 82 aa9.82□□□□□ -0.84
COLCA2-206ENST00000638573 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
COLCA2-206ENST00000638573 DLEU1O43261 78 aa9.81□□□□□ -0.84
COLCA2-206ENST00000638573 SPRR1AP35321 89 aa9.81□□□□□ -0.84
COLCA2-206ENST00000638573 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
COLCA2-206ENST00000638573 C14orf144Q96I85 54 aa9.8□□□□□ -0.84
COLCA2-206ENST00000638573 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
COLCA2-206ENST00000638573 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
COLCA2-206ENST00000638573 SLC25A34Q6PIV7 304 aa9.78□□□□□ -0.84
COLCA2-206ENST00000638573 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
COLCA2-206ENST00000638573 ZNF73O43830 326 aaPredicted RBP9.77□□□□□ -0.85
COLCA2-206ENST00000638573 A6NDN8 102 aa9.76□□□□□ -0.85
COLCA2-206ENST00000638573 TRAV13-2A0A0B4J235 113 aa9.75□□□□□ -0.85
COLCA2-206ENST00000638573 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
COLCA2-206ENST00000638573 B5MCH6 92 aa9.74□□□□□ -0.85
COLCA2-206ENST00000638573 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
COLCA2-206ENST00000638573 ANAPC11Q9NYG5 84 aa9.74□□□□□ -0.85
COLCA2-206ENST00000638573 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
COLCA2-206ENST00000638573 LPAP08519 4548 aa9.74□□□□□ -0.85
COLCA2-206ENST00000638573 Q6ZRX8 168 aa9.73□□□□□ -0.85
COLCA2-206ENST00000638573 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
COLCA2-206ENST00000638573 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
COLCA2-206ENST00000638573 A0A087X002 238 aa9.72□□□□□ -0.85
COLCA2-206ENST00000638573 A4D1N5 150 aa9.72□□□□□ -0.85
COLCA2-206ENST00000638573 CRYGAP11844 174 aa9.7□□□□□ -0.86
COLCA2-206ENST00000638573 SMCR5Q8TEV8 140 aa9.7□□□□□ -0.86
COLCA2-206ENST00000638573 C6orf99Q4VX62 202 aa9.69□□□□□ -0.86
COLCA2-206ENST00000638573 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
COLCA2-206ENST00000638573 C2orf91Q6ZV80 131 aa9.68□□□□□ -0.86
COLCA2-206ENST00000638573 TSPAN13O95857 204 aa9.67□□□□□ -0.86
COLCA2-206ENST00000638573 COX7BP24311 80 aa9.67□□□□□ -0.86
COLCA2-206ENST00000638573 SPRR4Q96PI1 79 aa9.67□□□□□ -0.86
COLCA2-206ENST00000638573 Q9BRP9 147 aa9.67□□□□□ -0.86
COLCA2-206ENST00000638573 TAL2Q16559 108 aa9.66□□□□□ -0.86
COLCA2-206ENST00000638573 C12orf57Q99622 126 aa9.66□□□□□ -0.86
COLCA2-206ENST00000638573 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
COLCA2-206ENST00000638573 TRBV7-6A0A0J9YX20 115 aa9.65□□□□□ -0.86
COLCA2-206ENST00000638573 ELOF1P60002 83 aaKnown RBP9.65□□□□□ -0.86
COLCA2-206ENST00000638573 UQCR10Q9UDW1 63 aa9.65□□□□□ -0.86
COLCA2-206ENST00000638573 TMEM238LA0A1B0GVL6 79 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 A6NJY4 79 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 PRR4Q16378 134 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 TYMSOSQ8TAI1 123 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
COLCA2-206ENST00000638573 CEND1Q8N111 149 aa9.63□□□□□ -0.87
COLCA2-206ENST00000638573 RAB37Q96AX2 223 aa9.63□□□□□ -0.87
COLCA2-206ENST00000638573 ERC2-IT1O76042 136 aa9.62□□□□□ -0.87
COLCA2-206ENST00000638573 SMIM6P0DI80 62 aa9.62□□□□□ -0.87
COLCA2-206ENST00000638573 GAGE2AQ6NT46 116 aa9.62□□□□□ -0.87
COLCA2-206ENST00000638573 HSD52Q0P140 79 aa9.61□□□□□ -0.87
COLCA2-206ENST00000638573 VAMP3Q15836 100 aa9.61□□□□□ -0.87
COLCA2-206ENST00000638573 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
COLCA2-206ENST00000638573 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
COLCA2-206ENST00000638573 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
COLCA2-206ENST00000638573 NHP2Q9NX24 153 aaKnown RBP9.59□□□□□ -0.87
COLCA2-206ENST00000638573 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
COLCA2-206ENST00000638573 CFC1P0CG37 223 aa9.58□□□□□ -0.88
COLCA2-206ENST00000638573 LINC00483Q53H64 154 aa9.58□□□□□ -0.88
COLCA2-206ENST00000638573 H7C2G1 150 aa9.57□□□□□ -0.88
COLCA2-206ENST00000638573 SLC25A20O43772 301 aa9.57□□□□□ -0.88
COLCA2-206ENST00000638573 FXYD2P54710 66 aa9.56□□□□□ -0.88
COLCA2-206ENST00000638573 C3orf22Q8N5N4 141 aa9.56□□□□□ -0.88
COLCA2-206ENST00000638573 ST20-AS1Q8NBB2 130 aa9.56□□□□□ -0.88
COLCA2-206ENST00000638573 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
COLCA2-206ENST00000638573 Q1RN00 199 aa9.55□□□□□ -0.88
COLCA2-206ENST00000638573 BVES-AS1Q5T3Y7 98 aa9.55□□□□□ -0.88
COLCA2-206ENST00000638573 PRO1933Q9H354 126 aa9.54□□□□□ -0.88
COLCA2-206ENST00000638573 LOC105371267A0A1B0GV96 52 aa9.53□□□□□ -0.88
COLCA2-206ENST00000638573 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
COLCA2-206ENST00000638573 PRO1854Q9UHT4 67 aa9.53□□□□□ -0.88
COLCA2-206ENST00000638573 IGLV9-49A0A0B4J1Y8 123 aa9.52□□□□□ -0.89
COLCA2-206ENST00000638573 DEFB105AQ8NG35 78 aa9.51□□□□□ -0.89
COLCA2-206ENST00000638573 MOBPQ13875 183 aa9.5□□□□□ -0.89
COLCA2-206ENST00000638573 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
COLCA2-206ENST00000638573 LINC00575Q6W349 94 aa9.5□□□□□ -0.89
COLCA2-206ENST00000638573 TEX49A0A1B0GTD5 131 aa9.49□□□□□ -0.89
COLCA2-206ENST00000638573 SPRR1BP22528 89 aa9.49□□□□□ -0.89
COLCA2-206ENST00000638573 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
COLCA2-206ENST00000638573 LAMTOR3Q9UHA4 124 aa9.49□□□□□ -0.89
COLCA2-206ENST00000638573 hADV29S1A0JD25 119 aa9.48□□□□□ -0.89
COLCA2-206ENST00000638573 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
COLCA2-206ENST00000638573 SNCGO76070 127 aa9.48□□□□□ -0.89
COLCA2-206ENST00000638573 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
COLCA2-206ENST00000638573 SSBP3-AS1Q7Z2R9 100 aa9.47□□□□□ -0.89
COLCA2-206ENST00000638573 Q8NBF4 154 aa9.47□□□□□ -0.89
COLCA2-206ENST00000638573 H0YGX0 51 aa9.46□□□□□ -0.9
COLCA2-206ENST00000638573 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
COLCA2-206ENST00000638573 K7ERJ3 54 aa9.45□□□□□ -0.9
COLCA2-206ENST00000638573 M0R143 59 aa9.45□□□□□ -0.9
COLCA2-206ENST00000638573 CTAG1AP78358 180 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms