RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
CLN6-215ENST00000636674 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
CLN6-215ENST00000636674 CMYA5Q8N3K9 4069 aa9.56□□□□□ -0.88
CLN6-215ENST00000636674 FAM236DA0A1B0GTK5 79 aa9.55□□□□□ -0.88
CLN6-215ENST00000636674 FAM236CP0DP71 79 aa9.55□□□□□ -0.88
CLN6-215ENST00000636674 Q6ZRP5 223 aa9.55□□□□□ -0.88
CLN6-215ENST00000636674 Q6ZTC4 211 aa9.55□□□□□ -0.88
CLN6-215ENST00000636674 ESRGQ1W209 222 aa9.55□□□□□ -0.88
CLN6-215ENST00000636674 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
CLN6-215ENST00000636674 KCNQ1DNQ9H478 68 aa9.54□□□□□ -0.88
CLN6-215ENST00000636674 RETNQ9HD89 108 aa9.53□□□□□ -0.88
CLN6-215ENST00000636674 NBEAL1Q6ZS30 2694 aa9.53□□□□□ -0.88
CLN6-215ENST00000636674 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
CLN6-215ENST00000636674 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
CLN6-215ENST00000636674 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
CLN6-215ENST00000636674 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
CLN6-215ENST00000636674 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
CLN6-215ENST00000636674 PLA2G2DQ9UNK4 145 aa9.5□□□□□ -0.89
CLN6-215ENST00000636674 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
CLN6-215ENST00000636674 NDUFC1O43677 76 aa9.49□□□□□ -0.89
CLN6-215ENST00000636674 IGLV5-48A0A075B6I7 105 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 Q5XG85 94 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 TM2D3Q9BRN9 247 aa9.48□□□□□ -0.89
CLN6-215ENST00000636674 A0A1B0GW54 56 aa9.47□□□□□ -0.89
CLN6-215ENST00000636674 IGKV4-1P06312 121 aa9.47□□□□□ -0.89
CLN6-215ENST00000636674 SERTAD4-AS1Q5TG53 156 aa9.47□□□□□ -0.89
CLN6-215ENST00000636674 IGLV5-37A0A075B6J1 123 aa9.46□□□□□ -0.89
CLN6-215ENST00000636674 NREPQ16612 68 aa9.46□□□□□ -0.9
CLN6-215ENST00000636674 Q8N377 158 aa9.46□□□□□ -0.9
CLN6-215ENST00000636674 RMI2Q96E14 147 aa9.46□□□□□ -0.9
CLN6-215ENST00000636674 DEFB131BA0A096LNP1 70 aa9.45□□□□□ -0.9
CLN6-215ENST00000636674 BPY2O14599 106 aa9.45□□□□□ -0.9
CLN6-215ENST00000636674 DHRS4-AS1Q9P1J3 65 aa9.45□□□□□ -0.9
CLN6-215ENST00000636674 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
CLN6-215ENST00000636674 KRTAP4-16G5E9R7 235 aaPredicted RBP9.44□□□□□ -0.9
CLN6-215ENST00000636674 PRYO14603 147 aa9.44□□□□□ -0.9
CLN6-215ENST00000636674 Q6ZRX8 168 aa9.44□□□□□ -0.9
CLN6-215ENST00000636674 SPRR1AP35321 89 aa9.43□□□□□ -0.9
CLN6-215ENST00000636674 ATP5EP56381 51 aaPredicted RBP9.43□□□□□ -0.9
CLN6-215ENST00000636674 F8WEM9 126 aa9.43□□□□□ -0.9
CLN6-215ENST00000636674 C11orf45Q8TAV5 145 aa9.42□□□□□ -0.9
CLN6-215ENST00000636674 TNP2Q05952 138 aa9.41□□□□□ -0.9
CLN6-215ENST00000636674 NOTCH1P46531 2555 aa9.41□□□□□ -0.9
CLN6-215ENST00000636674 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
CLN6-215ENST00000636674 OCR1Q9BZK8 76 aa9.41□□□□□ -0.9
CLN6-215ENST00000636674 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
CLN6-215ENST00000636674 Q8N9L7 120 aa9.4□□□□□ -0.9
CLN6-215ENST00000636674 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
CLN6-215ENST00000636674 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
CLN6-215ENST00000636674 Q9BRP9 147 aa9.39□□□□□ -0.91
CLN6-215ENST00000636674 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
CLN6-215ENST00000636674 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLN6-215ENST00000636674 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
CLN6-215ENST00000636674 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
CLN6-215ENST00000636674 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
CLN6-215ENST00000636674 ETDCA0A1B0GVM5 59 aa9.36□□□□□ -0.91
CLN6-215ENST00000636674 A0A1W2PNM2 257 aa9.36□□□□□ -0.91
CLN6-215ENST00000636674 A0A0U1RQV1 116 aa9.36□□□□□ -0.91
CLN6-215ENST00000636674 Q8NBF4 154 aa9.36□□□□□ -0.91
CLN6-215ENST00000636674 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
CLN6-215ENST00000636674 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
CLN6-215ENST00000636674 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
CLN6-215ENST00000636674 FAM168BA1KXE4 195 aa9.34□□□□□ -0.91
CLN6-215ENST00000636674 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
CLN6-215ENST00000636674 HRCT1Q6UXD1 115 aa9.34□□□□□ -0.91
CLN6-215ENST00000636674 DNAH3Q8TD57 4116 aa9.34□□□□□ -0.91
CLN6-215ENST00000636674 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
CLN6-215ENST00000636674 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
CLN6-215ENST00000636674 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
CLN6-215ENST00000636674 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
CLN6-215ENST00000636674 MRPL55Q7Z7F7 128 aaKnown RBP9.32□□□□□ -0.92
CLN6-215ENST00000636674 LCE6AA0A183 80 aa9.31□□□□□ -0.92
CLN6-215ENST00000636674 ST20-AS1Q8NBB2 130 aa9.31□□□□□ -0.92
CLN6-215ENST00000636674 PRKDCP78527 4128 aaKnown RBP9.3□□□□□ -0.92
CLN6-215ENST00000636674 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
CLN6-215ENST00000636674 SMIM29Q86T20 159 aa9.27□□□□□ -0.92
CLN6-215ENST00000636674 DSCR10P59022 87 aa9.26□□□□□ -0.93
CLN6-215ENST00000636674 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
CLN6-215ENST00000636674 UBE2BP63146 152 aa9.25□□□□□ -0.93
CLN6-215ENST00000636674 HIGD2AQ9BW72 106 aa9.24□□□□□ -0.93
CLN6-215ENST00000636674 PRB2P02812 416 aaPredicted RBP9.22□□□□□ -0.93
CLN6-215ENST00000636674 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
CLN6-215ENST00000636674 FAM30AQ9NZY2 134 aa9.21□□□□□ -0.93
CLN6-215ENST00000636674 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
CLN6-215ENST00000636674 K7EQZ3 153 aa9.21□□□□□ -0.94
CLN6-215ENST00000636674 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
CLN6-215ENST00000636674 K7EIL1 84 aa9.19□□□□□ -0.94
CLN6-215ENST00000636674 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
CLN6-215ENST00000636674 CNBPP62633 177 aaKnown RBP9.18□□□□□ -0.94
CLN6-215ENST00000636674 IGFL1Q6UW32 110 aa9.18□□□□□ -0.94
CLN6-215ENST00000636674 LINC00474Q9P2X8 69 aa9.18□□□□□ -0.94
CLN6-215ENST00000636674 TGP01266 2768 aa9.17□□□□□ -0.94
CLN6-215ENST00000636674 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
CLN6-215ENST00000636674 HCG22E2RYF7 251 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 764.5 ms