RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
CLN5-208ENST00000636183 IGFL1Q6UW32 110 aa10.59□□□□□ -0.71
CLN5-208ENST00000636183 SPTBN4Q9H254 2564 aa10.58□□□□□ -0.72
CLN5-208ENST00000636183 Q8N1X5 172 aa10.58□□□□□ -0.72
CLN5-208ENST00000636183 ANKRD11Q6UB99 2663 aaPredicted RBP10.57□□□□□ -0.72
CLN5-208ENST00000636183 C8orf17Q9NRJ1 99 aa10.57□□□□□ -0.72
CLN5-208ENST00000636183 LOC110117498A0A087WWA1 95 aa10.57□□□□□ -0.72
CLN5-208ENST00000636183 TNP2Q05952 138 aa10.56□□□□□ -0.72
CLN5-208ENST00000636183 CAMK2N1Q7Z7J9 78 aa10.56□□□□□ -0.72
CLN5-208ENST00000636183 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
CLN5-208ENST00000636183 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
CLN5-208ENST00000636183 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
CLN5-208ENST00000636183 A0A1B0GVX0 72 aa10.53□□□□□ -0.72
CLN5-208ENST00000636183 C9orf163Q8N9P6 203 aa10.53□□□□□ -0.72
CLN5-208ENST00000636183 COA5Q86WW8 74 aa10.52□□□□□ -0.73
CLN5-208ENST00000636183 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
CLN5-208ENST00000636183 KCNQ1DNQ9H478 68 aa10.51□□□□□ -0.73
CLN5-208ENST00000636183 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
CLN5-208ENST00000636183 UQCR11O14957 56 aa10.47□□□□□ -0.73
CLN5-208ENST00000636183 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
CLN5-208ENST00000636183 PLA2G2DQ9UNK4 145 aa10.45□□□□□ -0.74
CLN5-208ENST00000636183 LINC00612Q8N6U2 182 aa10.45□□□□□ -0.74
CLN5-208ENST00000636183 PRR15Q8IV56 129 aa10.43□□□□□ -0.74
CLN5-208ENST00000636183 MIR22HGQ0VDD5 57 aa10.43□□□□□ -0.74
CLN5-208ENST00000636183 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
CLN5-208ENST00000636183 Q8N377 158 aa10.39□□□□□ -0.75
CLN5-208ENST00000636183 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
CLN5-208ENST00000636183 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
CLN5-208ENST00000636183 CEP295Q9C0D2 2601 aa10.39□□□□□ -0.75
CLN5-208ENST00000636183 PCSK5Q92824 1860 aa10.37□□□□□ -0.75
CLN5-208ENST00000636183 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
CLN5-208ENST00000636183 A0A096LNT2 108 aa10.36□□□□□ -0.75
CLN5-208ENST00000636183 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
CLN5-208ENST00000636183 A8MUN3 132 aa10.34□□□□□ -0.75
CLN5-208ENST00000636183 CDC42SE1Q9NRR8 79 aa10.33□□□□□ -0.76
CLN5-208ENST00000636183 ERC2-IT1O76042 136 aa10.33□□□□□ -0.76
CLN5-208ENST00000636183 USP24Q9UPU5 2620 aa10.33□□□□□ -0.76
CLN5-208ENST00000636183 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
CLN5-208ENST00000636183 Q5VSD8 79 aa10.31□□□□□ -0.76
CLN5-208ENST00000636183 CNBPP62633 177 aaKnown RBP10.3□□□□□ -0.76
CLN5-208ENST00000636183 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
CLN5-208ENST00000636183 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
CLN5-208ENST00000636183 LUZP6Q538Z0 58 aa10.29□□□□□ -0.76
CLN5-208ENST00000636183 KRTAP1-3Q8IUG1 177 aa10.29□□□□□ -0.76
CLN5-208ENST00000636183 LITAFQ99732 161 aa10.28□□□□□ -0.76
CLN5-208ENST00000636183 PRO0628Q9UI54 55 aa10.27□□□□□ -0.76
CLN5-208ENST00000636183 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.76
CLN5-208ENST00000636183 EP400Q96L91 3159 aa10.27□□□□□ -0.77
CLN5-208ENST00000636183 FLNBO75369 2602 aaKnown RBP10.25□□□□□ -0.77
CLN5-208ENST00000636183 CENPFP49454 3210 aa10.24□□□□□ -0.77
CLN5-208ENST00000636183 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.24□□□□□ -0.77
CLN5-208ENST00000636183 KRTAP1-1Q07627 177 aa10.23□□□□□ -0.77
CLN5-208ENST00000636183 HECTD1Q9ULT8 2610 aa10.19□□□□□ -0.78
CLN5-208ENST00000636183 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
CLN5-208ENST00000636183 HRES1P13985 223 aa10.18□□□□□ -0.78
CLN5-208ENST00000636183 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
CLN5-208ENST00000636183 S4R3F8 94 aa10.18□□□□□ -0.78
CLN5-208ENST00000636183 PRO0461Q9UI25 63 aa10.17□□□□□ -0.78
CLN5-208ENST00000636183 KLK9Q2XQG4 91 aa10.16□□□□□ -0.78
CLN5-208ENST00000636183 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
CLN5-208ENST00000636183 CSAG1Q6PB30 78 aa10.15□□□□□ -0.78
CLN5-208ENST00000636183 EPG5Q9HCE0 2579 aa10.12□□□□□ -0.79
CLN5-208ENST00000636183 A0A1W2PNM2 257 aa10.1□□□□□ -0.79
CLN5-208ENST00000636183 R4GN34 69 aa10.08□□□□□ -0.8
CLN5-208ENST00000636183 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
CLN5-208ENST00000636183 CD164Q04900 197 aa10.07□□□□□ -0.8
CLN5-208ENST00000636183 RPS28P62857 69 aaKnown RBP10.06□□□□□ -0.8
CLN5-208ENST00000636183 LCE6AA0A183 80 aa10.05□□□□□ -0.8
CLN5-208ENST00000636183 BPTFQ12830 3046 aa10.01□□□□□ -0.81
CLN5-208ENST00000636183 A0A1B0GU33 70 aa10□□□□□ -0.81
CLN5-208ENST00000636183 ATRQ13535 2644 aa9.99□□□□□ -0.81
CLN5-208ENST00000636183 FAM229BQ4G0N7 80 aa9.99□□□□□ -0.81
CLN5-208ENST00000636183 ZCCHC13Q8WW36 166 aaKnown RBP9.98□□□□□ -0.81
CLN5-208ENST00000636183 CR1P17927 2039 aa9.97□□□□□ -0.81
CLN5-208ENST00000636183 Q1T7F1 81 aa9.96□□□□□ -0.81
CLN5-208ENST00000636183 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.81
CLN5-208ENST00000636183 MAST4O15021 2626 aa9.95□□□□□ -0.82
CLN5-208ENST00000636183 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
CLN5-208ENST00000636183 LCA10Q71F78 164 aa9.92□□□□□ -0.82
CLN5-208ENST00000636183 SPINK7P58062 85 aa9.89□□□□□ -0.83
CLN5-208ENST00000636183 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
CLN5-208ENST00000636183 OXTP01178 125 aa9.88□□□□□ -0.83
CLN5-208ENST00000636183 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
CLN5-208ENST00000636183 M0QZ58 72 aa9.87□□□□□ -0.83
CLN5-208ENST00000636183 KLKP1Q107X0 134 aa9.87□□□□□ -0.83
CLN5-208ENST00000636183 SPANXA2-OT1Q8N9U9 137 aa9.85□□□□□ -0.83
CLN5-208ENST00000636183 WIPF1O43516 503 aa9.85□□□□□ -0.83
CLN5-208ENST00000636183 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
CLN5-208ENST00000636183 H7BZZ5 65 aa9.81□□□□□ -0.84
CLN5-208ENST00000636183 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
CLN5-208ENST00000636183 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
CLN5-208ENST00000636183 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
CLN5-208ENST00000636183 KTN1-AS1Q86SY8 53 aa9.75□□□□□ -0.85
CLN5-208ENST00000636183 KRTAP1-5Q9BYS1 174 aa9.72□□□□□ -0.85
CLN5-208ENST00000636183 Q5W150 140 aa9.72□□□□□ -0.85
CLN5-208ENST00000636183 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.86
CLN5-208ENST00000636183 STAB1Q9NY15 2570 aa9.7□□□□□ -0.86
CLN5-208ENST00000636183 ADM2Q7Z4H4 148 aa9.69□□□□□ -0.86
CLN5-208ENST00000636183 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
CLN5-208ENST00000636183 ITPR3Q14573 2671 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms