RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
CLN6-210ENST00000635747 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
CLN6-210ENST00000635747 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
CLN6-210ENST00000635747 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
CLN6-210ENST00000635747 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
CLN6-210ENST00000635747 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
CLN6-210ENST00000635747 TIMM17BO60830 172 aa10.61□□□□□ -0.71
CLN6-210ENST00000635747 B5MCH6 92 aa10.6□□□□□ -0.71
CLN6-210ENST00000635747 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
CLN6-210ENST00000635747 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
CLN6-210ENST00000635747 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
CLN6-210ENST00000635747 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
CLN6-210ENST00000635747 ADAMTSL4-AS1Q5T5F5 129 aa10.58□□□□□ -0.72
CLN6-210ENST00000635747 TTTY13Q9BZ97 58 aa10.58□□□□□ -0.72
CLN6-210ENST00000635747 DLEU1O43261 78 aa10.57□□□□□ -0.72
CLN6-210ENST00000635747 SPATA45Q537H7 98 aa10.57□□□□□ -0.72
CLN6-210ENST00000635747 C4orf48Q5BLP8 95 aa10.57□□□□□ -0.72
CLN6-210ENST00000635747 PAM16Q9Y3D7 125 aa10.57□□□□□ -0.72
CLN6-210ENST00000635747 COX8AP10176 69 aa10.56□□□□□ -0.72
CLN6-210ENST00000635747 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
CLN6-210ENST00000635747 SCGB1D4Q6XE38 83 aa10.56□□□□□ -0.72
CLN6-210ENST00000635747 Q6ZRX8 168 aa10.56□□□□□ -0.72
CLN6-210ENST00000635747 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
CLN6-210ENST00000635747 LOC105371267A0A1B0GV96 52 aa10.55□□□□□ -0.72
CLN6-210ENST00000635747 SMIM6P0DI80 62 aa10.55□□□□□ -0.72
CLN6-210ENST00000635747 NPC2P61916 151 aa10.55□□□□□ -0.72
CLN6-210ENST00000635747 LINC00483Q53H64 154 aa10.55□□□□□ -0.72
CLN6-210ENST00000635747 LITAFQ99732 161 aa10.55□□□□□ -0.72
CLN6-210ENST00000635747 Q6ZVH6 145 aa10.54□□□□□ -0.72
CLN6-210ENST00000635747 PPDPFQ9H3Y8 114 aa10.54□□□□□ -0.72
CLN6-210ENST00000635747 SPANXCQ9NY87 97 aa10.54□□□□□ -0.72
CLN6-210ENST00000635747 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
CLN6-210ENST00000635747 RETNLBQ9BQ08 111 aa10.53□□□□□ -0.72
CLN6-210ENST00000635747 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
CLN6-210ENST00000635747 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.73
CLN6-210ENST00000635747 GAGE2AQ6NT46 116 aa10.52□□□□□ -0.73
CLN6-210ENST00000635747 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
CLN6-210ENST00000635747 Q9BRP9 147 aa10.52□□□□□ -0.73
CLN6-210ENST00000635747 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.73
CLN6-210ENST00000635747 COPS9Q8WXC6 57 aa10.51□□□□□ -0.73
CLN6-210ENST00000635747 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
CLN6-210ENST00000635747 SLC25A34Q6PIV7 304 aa10.5□□□□□ -0.73
CLN6-210ENST00000635747 Q8NBF4 154 aa10.5□□□□□ -0.73
CLN6-210ENST00000635747 IGLV7-46A0A075B6I9 117 aa10.49□□□□□ -0.73
CLN6-210ENST00000635747 IFITM1P13164 125 aa10.49□□□□□ -0.73
CLN6-210ENST00000635747 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
CLN6-210ENST00000635747 C14orf144Q96I85 54 aa10.49□□□□□ -0.73
CLN6-210ENST00000635747 SPINK1P00995 79 aa10.48□□□□□ -0.73
CLN6-210ENST00000635747 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
CLN6-210ENST00000635747 SSBP3-AS1Q7Z2R9 100 aa10.48□□□□□ -0.73
CLN6-210ENST00000635747 LINC00518Q8N0U6 118 aa10.48□□□□□ -0.73
CLN6-210ENST00000635747 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
CLN6-210ENST00000635747 FP248Q71RG6 208 aaPredicted RBP10.45□□□□□ -0.74
CLN6-210ENST00000635747 CDIP1Q9H305 208 aa10.45□□□□□ -0.74
CLN6-210ENST00000635747 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
CLN6-210ENST00000635747 MOBPQ13875 183 aa10.44□□□□□ -0.74
CLN6-210ENST00000635747 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
CLN6-210ENST00000635747 RPS29P62273 56 aaKnown RBP10.42□□□□□ -0.74
CLN6-210ENST00000635747 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
CLN6-210ENST00000635747 C2orf91Q6ZV80 131 aa10.41□□□□□ -0.74
CLN6-210ENST00000635747 MUC2Q02817 5179 aa10.41□□□□□ -0.74
CLN6-210ENST00000635747 A0A0U1RQV1 116 aa10.39□□□□□ -0.75
CLN6-210ENST00000635747 TAL2Q16559 108 aa10.39□□□□□ -0.75
CLN6-210ENST00000635747 MUSTN1Q8IVN3 82 aa10.39□□□□□ -0.75
CLN6-210ENST00000635747 HIST1H4GQ99525 98 aa10.39□□□□□ -0.75
CLN6-210ENST00000635747 C12orf57Q99622 126 aa10.38□□□□□ -0.75
CLN6-210ENST00000635747 C9orf153Q5TBE3 101 aa10.37□□□□□ -0.75
CLN6-210ENST00000635747 ST20-AS1Q8NBB2 130 aa10.37□□□□□ -0.75
CLN6-210ENST00000635747 COX7BP24311 80 aa10.36□□□□□ -0.75
CLN6-210ENST00000635747 ELOF1P60002 83 aaKnown RBP10.36□□□□□ -0.75
CLN6-210ENST00000635747 C6orf99Q4VX62 202 aa10.36□□□□□ -0.75
CLN6-210ENST00000635747 TRBV7-6A0A0J9YX20 115 aa10.35□□□□□ -0.75
CLN6-210ENST00000635747 SLC25A20O43772 301 aa10.34□□□□□ -0.75
CLN6-210ENST00000635747 SPRR1BP22528 89 aa10.34□□□□□ -0.75
CLN6-210ENST00000635747 Q8N377 158 aa10.33□□□□□ -0.76
CLN6-210ENST00000635747 A6NDN8 102 aa10.32□□□□□ -0.76
CLN6-210ENST00000635747 LAMTOR3Q9UHA4 124 aa10.32□□□□□ -0.76
CLN6-210ENST00000635747 TRAV13-2A0A0B4J235 113 aa10.31□□□□□ -0.76
CLN6-210ENST00000635747 A0A1B0GWB2 263 aa10.31□□□□□ -0.76
CLN6-210ENST00000635747 A4D1N5 150 aa10.31□□□□□ -0.76
CLN6-210ENST00000635747 TSTD3H0UI37 97 aa10.31□□□□□ -0.76
CLN6-210ENST00000635747 HSD52Q0P140 79 aa10.31□□□□□ -0.76
CLN6-210ENST00000635747 PRO1933Q9H354 126 aa10.31□□□□□ -0.76
CLN6-210ENST00000635747 CEND1Q8N111 149 aa10.3□□□□□ -0.76
CLN6-210ENST00000635747 TMEM238LA0A1B0GVL6 79 aa10.29□□□□□ -0.76
CLN6-210ENST00000635747 A6NJY4 79 aa10.29□□□□□ -0.76
CLN6-210ENST00000635747 KRTAP13-3Q3SY46 172 aa10.29□□□□□ -0.76
CLN6-210ENST00000635747 TEX49A0A1B0GTD5 131 aa10.27□□□□□ -0.77
CLN6-210ENST00000635747 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
CLN6-210ENST00000635747 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
CLN6-210ENST00000635747 LIMD2Q9BT23 127 aa10.25□□□□□ -0.77
CLN6-210ENST00000635747 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
CLN6-210ENST00000635747 A0A0B4J2C4 111 aa10.24□□□□□ -0.77
CLN6-210ENST00000635747 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
CLN6-210ENST00000635747 CFC1P0CG37 223 aa10.22□□□□□ -0.77
CLN6-210ENST00000635747 FXYD2P54710 66 aa10.22□□□□□ -0.77
CLN6-210ENST00000635747 CD164Q04900 197 aa10.21□□□□□ -0.77
CLN6-210ENST00000635747 VAMP3Q15836 100 aa10.21□□□□□ -0.77
CLN6-210ENST00000635747 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.77
CLN6-210ENST00000635747 IGLV5-48A0A075B6I7 105 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 604.8 ms