RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	CSNK1G2-AS1	Q8NCQ2	148 aa		5.79	□□□□□ -1.48
SPTAN1-223	ENST00000630866	ELOF1	P60002	83 aa	Known RBP	5.78	□□□□□ -1.48
SPTAN1-223	ENST00000630866		A0A087WTM6	91 aa		5.78	□□□□□ -1.48
SPTAN1-223	ENST00000630866		A0A1B0GW54	56 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	LINC00476	Q8WZB0	136 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	CYP4F30P	Q9H0H9	118 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	IGLV5-45	A0A087WSX0	123 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	KRTAP1-3	Q8IUG1	177 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	CR1	P17927	2039 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	MIR22HG	Q0VDD5	57 aa		5.77	□□□□□ -1.49
SPTAN1-223	ENST00000630866	LOC101927531	A0A1B0GV80	90 aa		5.76	□□□□□ -1.49
SPTAN1-223	ENST00000630866	KLK9	Q2XQG4	91 aa		5.76	□□□□□ -1.49
SPTAN1-223	ENST00000630866	CFAP46	Q8IYW2	2715 aa		5.76	□□□□□ -1.49
SPTAN1-223	ENST00000630866	ATR	Q13535	2644 aa		5.76	□□□□□ -1.49
SPTAN1-223	ENST00000630866	FAM168B	A1KXE4	195 aa		5.75	□□□□□ -1.49
SPTAN1-223	ENST00000630866	LINC00304	Q8N9R0	145 aa		5.75	□□□□□ -1.49
SPTAN1-223	ENST00000630866	LINC01546	A6NGU7	62 aa		5.75	□□□□□ -1.49
SPTAN1-223	ENST00000630866	ITPR3	Q14573	2671 aa		5.75	□□□□□ -1.49
SPTAN1-223	ENST00000630866	ST20-AS1	Q8NBB2	130 aa		5.74	□□□□□ -1.49
SPTAN1-223	ENST00000630866	ZNF575	Q86XF7	245 aa		5.74	□□□□□ -1.49
SPTAN1-223	ENST00000630866	FLNA	P21333	2647 aa	Known RBP	5.74	□□□□□ -1.49
SPTAN1-223	ENST00000630866	ERC2-IT1	O76042	136 aa		5.73	□□□□□ -1.49
SPTAN1-223	ENST00000630866	COA5	Q86WW8	74 aa		5.73	□□□□□ -1.49
SPTAN1-223	ENST00000630866	KRTAP1-1	Q07627	177 aa		5.73	□□□□□ -1.49
SPTAN1-223	ENST00000630866	BAHCC1	Q9P281	2608 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866	CDC42SE1	Q9NRR8	79 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866		Q6ZQT0	140 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866	PSORS1C2	Q9UIG4	136 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866	IGLV6-57	P01721	117 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866	CD164	Q04900	197 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866		A8MUN3	132 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866	ZNF861P	O60384	105 aa		5.72	□□□□□ -1.49
SPTAN1-223	ENST00000630866	CASC10	Q5T4H9	136 aa		5.71	□□□□□ -1.5
SPTAN1-223	ENST00000630866	LCA10	Q71F78	164 aa		5.7	□□□□□ -1.5
SPTAN1-223	ENST00000630866	C9orf163	Q8N9P6	203 aa		5.69	□□□□□ -1.5
SPTAN1-223	ENST00000630866	LINC00528	Q8N1L1	170 aa		5.69	□□□□□ -1.5
SPTAN1-223	ENST00000630866	PRUNE2	Q8WUY3	3088 aa		5.69	□□□□□ -1.5
SPTAN1-223	ENST00000630866	IGLV1-50	A0A075B6I6	118 aa		5.68	□□□□□ -1.5
SPTAN1-223	ENST00000630866	KTN1-AS1	Q86SY8	53 aa		5.68	□□□□□ -1.5
SPTAN1-223	ENST00000630866	MRPL34	Q9BQ48	92 aa	Known RBP	5.68	□□□□□ -1.5
SPTAN1-223	ENST00000630866	LINC00483	Q53H64	154 aa		5.68	□□□□□ -1.5
SPTAN1-223	ENST00000630866	GIG44	P09565	113 aa	Predicted RBP	5.68	□□□□□ -1.5
SPTAN1-223	ENST00000630866	PRR34	Q9NV39	138 aa		5.67	□□□□□ -1.5
SPTAN1-223	ENST00000630866		Q6ZSA8	131 aa		5.67	□□□□□ -1.5
SPTAN1-223	ENST00000630866	C15orf56	Q8N910	161 aa		5.67	□□□□□ -1.5
SPTAN1-223	ENST00000630866	TRBV7-4	A0A0J9YYF1	115 aa		5.67	□□□□□ -1.5
SPTAN1-223	ENST00000630866	C5orf42	Q9H799	3197 aa		5.67	□□□□□ -1.5
SPTAN1-223	ENST00000630866		A8MWP4	228 aa		5.66	□□□□□ -1.5
SPTAN1-223	ENST00000630866		A0A0D9SG42	100 aa		5.66	□□□□□ -1.5
SPTAN1-223	ENST00000630866	CAMK2N1	Q7Z7J9	78 aa		5.66	□□□□□ -1.5
SPTAN1-223	ENST00000630866	IGLV7-43	P04211	117 aa		5.65	□□□□□ -1.5
SPTAN1-223	ENST00000630866	LOC110117498	A0A087WWA1	95 aa		5.65	□□□□□ -1.5
SPTAN1-223	ENST00000630866	FAM218A	Q96MZ4	157 aa		5.65	□□□□□ -1.5
SPTAN1-223	ENST00000630866	KCNQ1DN	Q9H478	68 aa		5.65	□□□□□ -1.51
SPTAN1-223	ENST00000630866	FLG2	Q5D862	2391 aa	Predicted RBP	5.64	□□□□□ -1.51
SPTAN1-223	ENST00000630866	LAMA3	Q16787	3333 aa		5.64	□□□□□ -1.51
SPTAN1-223	ENST00000630866	LINC00612	Q8N6U2	182 aa		5.64	□□□□□ -1.51
SPTAN1-223	ENST00000630866	PLAC4	Q8WY50	150 aa		5.64	□□□□□ -1.51
SPTAN1-223	ENST00000630866	OBSCN-AS1	Q96MR7	158 aa		5.63	□□□□□ -1.51
SPTAN1-223	ENST00000630866	C8orf17	Q9NRJ1	99 aa		5.63	□□□□□ -1.51
SPTAN1-223	ENST00000630866		K7EQZ3	153 aa		5.63	□□□□□ -1.51
SPTAN1-223	ENST00000630866	RANBP2	P49792	3224 aa	Known RBP	5.62	□□□□□ -1.51
SPTAN1-223	ENST00000630866	TNP2	Q05952	138 aa		5.62	□□□□□ -1.51
SPTAN1-223	ENST00000630866	BRCA2	P51587	3418 aa		5.62	□□□□□ -1.51
SPTAN1-223	ENST00000630866	IGLV5-48	A0A075B6I7	105 aa		5.62	□□□□□ -1.51
SPTAN1-223	ENST00000630866		A0A0A0MQY5	61 aa		5.62	□□□□□ -1.51
SPTAN1-223	ENST00000630866	DSCR10	P59022	87 aa		5.61	□□□□□ -1.51
SPTAN1-223	ENST00000630866	SETX	Q7Z333	2677 aa	Known RBP	5.61	□□□□□ -1.51
SPTAN1-223	ENST00000630866	TLX1NB	P0CAT3	122 aa		5.61	□□□□□ -1.51
SPTAN1-223	ENST00000630866	ANAPC11	Q9NYG5	84 aa		5.61	□□□□□ -1.51
SPTAN1-223	ENST00000630866	CNBP	P62633	177 aa	Known RBP	5.6	□□□□□ -1.51
SPTAN1-223	ENST00000630866	CENPE	Q02224	2701 aa		5.6	□□□□□ -1.51
SPTAN1-223	ENST00000630866		A0A1W2PNN7	141 aa		5.59	□□□□□ -1.51
SPTAN1-223	ENST00000630866	PLA2G2D	Q9UNK4	145 aa		5.59	□□□□□ -1.51
SPTAN1-223	ENST00000630866	IGFL1	Q6UW32	110 aa		5.58	□□□□□ -1.52
SPTAN1-223	ENST00000630866		Q1T7F1	81 aa		5.57	□□□□□ -1.52
SPTAN1-223	ENST00000630866	STAB1	Q9NY15	2570 aa		5.57	□□□□□ -1.52
SPTAN1-223	ENST00000630866	CHD7	Q9P2D1	2997 aa		5.57	□□□□□ -1.52
SPTAN1-223	ENST00000630866	TEP1	Q99973	2627 aa	Known RBP	5.57	□□□□□ -1.52
SPTAN1-223	ENST00000630866	FAM104A	Q969W3	186 aa		5.55	□□□□□ -1.52
SPTAN1-223	ENST00000630866	SPRR4	Q96PI1	79 aa		5.55	□□□□□ -1.52
SPTAN1-223	ENST00000630866	TEX15	Q9BXT5	2789 aa		5.54	□□□□□ -1.52
SPTAN1-223	ENST00000630866		A0A1B0GVX0	72 aa		5.54	□□□□□ -1.52
SPTAN1-223	ENST00000630866	SMCP	P49901	116 aa	Predicted RBP	5.54	□□□□□ -1.52
SPTAN1-223	ENST00000630866	PRR15	Q8IV56	129 aa		5.54	□□□□□ -1.52
SPTAN1-223	ENST00000630866	LITAF	Q99732	161 aa		5.54	□□□□□ -1.52
SPTAN1-223	ENST00000630866	COL6A3	P12111	3177 aa		5.53	□□□□□ -1.52
SPTAN1-223	ENST00000630866	LAMA2	P24043	3122 aa	Known RBP	5.53	□□□□□ -1.52
SPTAN1-223	ENST00000630866	LCE6A	A0A183	80 aa		5.53	□□□□□ -1.52
SPTAN1-223	ENST00000630866		Q8N377	158 aa		5.53	□□□□□ -1.52
SPTAN1-223	ENST00000630866	WIPF1	O43516	503 aa		5.52	□□□□□ -1.53
SPTAN1-223	ENST00000630866	SZT2	Q5T011	3432 aa		5.52	□□□□□ -1.53
SPTAN1-223	ENST00000630866	IGLV7-46	A0A075B6I9	117 aa		5.52	□□□□□ -1.53
SPTAN1-223	ENST00000630866	AKAP13	Q12802	2813 aa		5.51	□□□□□ -1.53
SPTAN1-223	ENST00000630866		A0A0G2JQZ4	141 aa		5.5	□□□□□ -1.53
SPTAN1-223	ENST00000630866		Q8N1X5	172 aa		5.49	□□□□□ -1.53
SPTAN1-223	ENST00000630866	PRR26	Q8N8Z3	221 aa		5.49	□□□□□ -1.53
SPTAN1-223	ENST00000630866	XIRP2	A4UGR9	3374 aa		5.48	□□□□□ -1.53
SPTAN1-223	ENST00000630866	KLKP1	Q107X0	134 aa		5.48	□□□□□ -1.53
SPTAN1-223	ENST00000630866	PRO0461	Q9UI25	63 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms