RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 KNTC1P50748 2209 aa1.46□□□□□ -2.18
CNOT1-223ENST00000628857 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CNOT1-223ENST00000628857 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
CNOT1-223ENST00000628857 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
CNOT1-223ENST00000628857 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
CNOT1-223ENST00000628857 FN1P02751 2386 aaKnown RBP1.44□□□□□ -2.18
CNOT1-223ENST00000628857 PTPRQQ9UMZ3 2332 aa1.43□□□□□ -2.18
CNOT1-223ENST00000628857 RPS27P42677 84 aaKnown RBP1.43□□□□□ -2.18
CNOT1-223ENST00000628857 POLR2KP53803 58 aaKnown RBP1.43□□□□□ -2.18
CNOT1-223ENST00000628857 RPL39P62891 51 aaKnown RBP1.43□□□□□ -2.18
CNOT1-223ENST00000628857 SPINK9Q5DT21 86 aa1.43□□□□□ -2.18
CNOT1-223ENST00000628857 LINC00575Q6W349 94 aa1.43□□□□□ -2.18
CNOT1-223ENST00000628857 PRO3102Q9H379 93 aa1.43□□□□□ -2.18
CNOT1-223ENST00000628857 TRIOBPQ9H2D6 2365 aa1.42□□□□□ -2.18
CNOT1-223ENST00000628857 MINOS1Q5TGZ0 78 aa1.42□□□□□ -2.18
CNOT1-223ENST00000628857 C10orf99Q6UWK7 81 aa1.42□□□□□ -2.18
CNOT1-223ENST00000628857 RPL39LQ96EH5 51 aaKnown RBP1.42□□□□□ -2.18
CNOT1-223ENST00000628857 TP53AIP1Q9HCN2 124 aa1.42□□□□□ -2.18
CNOT1-223ENST00000628857 CRIPTQ9P021 101 aa1.42□□□□□ -2.18
CNOT1-223ENST00000628857 ANKRD17O75179 2603 aaKnown RBP1.42□□□□□ -2.18
CNOT1-223ENST00000628857 CNOT1A5YKK6 2376 aaKnown RBP1.42□□□□□ -2.18
CNOT1-223ENST00000628857 ASXL3Q9C0F0 2248 aa1.42□□□□□ -2.18
CNOT1-223ENST00000628857 DOPEY2Q9Y3R5 2298 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 A0A096LNT2 108 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 IGKV2-24A0A0C4DH68 120 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 PRCDQ00LT1 54 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 PIGYQ3MUY2 71 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 C6orf48Q9UBA6 75 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 AHCTF1Q8WYP5 2266 aa1.41□□□□□ -2.18
CNOT1-223ENST00000628857 LYNX1G3V0Z9 82 aa1.4□□□□□ -2.19
CNOT1-223ENST00000628857 K7EQZ3 153 aa1.4□□□□□ -2.19
CNOT1-223ENST00000628857 CCL22O00626 93 aa1.4□□□□□ -2.19
CNOT1-223ENST00000628857 PCOTHQ58A44 107 aa1.4□□□□□ -2.19
CNOT1-223ENST00000628857 KRTAP13-1Q8IUC0 172 aa1.4□□□□□ -2.19
CNOT1-223ENST00000628857 KNL1Q8NG31 2342 aa1.39□□□□□ -2.19
CNOT1-223ENST00000628857 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
CNOT1-223ENST00000628857 Q6ZRN7 208 aaPredicted RBP1.39□□□□□ -2.19
CNOT1-223ENST00000628857 WFDC13Q8IUB5 93 aa1.39□□□□□ -2.19
CNOT1-223ENST00000628857 UBE2DNLQ8IWF7 75 aa1.39□□□□□ -2.19
CNOT1-223ENST00000628857 CACNA1EQ15878 2313 aa1.39□□□□□ -2.19
CNOT1-223ENST00000628857 ICE1Q9Y2F5 2266 aa1.38□□□□□ -2.19
CNOT1-223ENST00000628857 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
CNOT1-223ENST00000628857 WFDC10BQ8IUB3 73 aa1.38□□□□□ -2.19
CNOT1-223ENST00000628857 USMG5Q96IX5 58 aa1.38□□□□□ -2.19
CNOT1-223ENST00000628857 MRPL34Q9BQ48 92 aaKnown RBP1.38□□□□□ -2.19
CNOT1-223ENST00000628857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.37□□□□□ -2.194e-7■■■■□ 23.5
CNOT1-223ENST00000628857 BRD3OSQ6XYD6 125 aa1.37□□□□□ -2.19
CNOT1-223ENST00000628857 COX6B2Q6YFQ2 88 aa1.37□□□□□ -2.19
CNOT1-223ENST00000628857 LEAP2Q969E1 77 aa1.37□□□□□ -2.19
CNOT1-223ENST00000628857 ASCC3Q8N3C0 2202 aaKnown RBP1.36□□□□□ -2.19
CNOT1-223ENST00000628857 I3L2K1 104 aa1.36□□□□□ -2.19
CNOT1-223ENST00000628857 USF3Q68DE3 2245 aa1.36□□□□□ -2.19
CNOT1-223ENST00000628857 COL6A6A6NMZ7 2263 aa1.36□□□□□ -2.19
CNOT1-223ENST00000628857 IGLV5-48A0A075B6I7 105 aa1.35□□□□□ -2.19
CNOT1-223ENST00000628857 H0YAA0 97 aa1.35□□□□□ -2.19
CNOT1-223ENST00000628857 RPL37P61927 97 aaKnown RBP1.35□□□□□ -2.19
CNOT1-223ENST00000628857 DEFB106AQ8N104 65 aa1.35□□□□□ -2.19
CNOT1-223ENST00000628857 ALMS1Q8TCU4 4167 aa1.34□□□□□ -2.19
CNOT1-223ENST00000628857 CACNA1BQ00975 2339 aa1.34□□□□□ -2.2
CNOT1-223ENST00000628857 CNTRLQ7Z7A1 2325 aa1.34□□□□□ -2.2
CNOT1-223ENST00000628857 M0QY20 66 aa1.33□□□□□ -2.2
CNOT1-223ENST00000628857 KAAG1Q9UBP8 84 aa1.33□□□□□ -2.2
CNOT1-223ENST00000628857 DEFB131AP59861 70 aa1.32□□□□□ -2.2
CNOT1-223ENST00000628857 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
CNOT1-223ENST00000628857 LYNX1P0DP58 116 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 COX6A2Q02221 97 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 UNQ6190/PRO20217Q6UXQ8 127 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 TMEM167AQ8TBQ9 72 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 TOMM7Q9P0U1 55 aa1.31□□□□□ -2.2
CNOT1-223ENST00000628857 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
CNOT1-223ENST00000628857 H1FX-AS1Q4G0G2 97 aa1.3□□□□□ -2.2
CNOT1-223ENST00000628857 Q6ZSA8 131 aa1.3□□□□□ -2.2
CNOT1-223ENST00000628857 C10orf95Q9H7T3 257 aa1.3□□□□□ -2.2
CNOT1-223ENST00000628857 PLCE1Q9P212 2302 aa1.3□□□□□ -2.2
CNOT1-223ENST00000628857 NAV3Q8IVL0 2385 aa1.3□□□□□ -2.2
CNOT1-223ENST00000628857 WT1-ASQ06250 92 aa1.29□□□□□ -2.2
CNOT1-223ENST00000628857 RPL39P5Q59GN2 51 aa1.29□□□□□ -2.2
CNOT1-223ENST00000628857 ZDBF2Q9HCK1 2354 aa1.29□□□□□ -2.2
CNOT1-223ENST00000628857 FBN1P35555 2871 aaKnown RBP1.29□□□□□ -2.2
CNOT1-223ENST00000628857 DEFB130BP0DP73 79 aa1.28□□□□□ -2.2
CNOT1-223ENST00000628857 DEFB130AP0DP74 79 aa1.28□□□□□ -2.2
CNOT1-223ENST00000628857 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
CNOT1-223ENST00000628857 LELP1Q5T871 98 aa1.28□□□□□ -2.2
CNOT1-223ENST00000628857 DEFB104AQ8WTQ1 72 aa1.28□□□□□ -2.2
CNOT1-223ENST00000628857 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
CNOT1-223ENST00000628857 OTOGLQ3ZCN5 2332 aa1.27□□□□□ -2.21
CNOT1-223ENST00000628857 DEFB108AA8MXU0 73 aa1.27□□□□□ -2.21
CNOT1-223ENST00000628857 H3BUA1 57 aa1.27□□□□□ -2.21
CNOT1-223ENST00000628857 K7EIM0 57 aa1.27□□□□□ -2.21
CNOT1-223ENST00000628857 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
CNOT1-223ENST00000628857 WNK2Q9Y3S1 2297 aa1.27□□□□□ -2.21
CNOT1-223ENST00000628857 A8MTW9 85 aa1.26□□□□□ -2.21
CNOT1-223ENST00000628857 DEFB105AQ8NG35 78 aa1.26□□□□□ -2.21
CNOT1-223ENST00000628857 PRO0255Q9UI72 69 aa1.26□□□□□ -2.21
CNOT1-223ENST00000628857 IGF2RP11717 2491 aa1.26□□□□□ -2.21
CNOT1-223ENST00000628857 PIEZO2Q9H5I5 2752 aa1.25□□□□□ -2.21
CNOT1-223ENST00000628857 TPRP12270 2363 aaKnown RBP1.25□□□□□ -2.21
CNOT1-223ENST00000628857 APLNQ9ULZ1 77 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms