RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 Q8N377 158 aa5.87□□□□□ -1.47
GABRB3-216ENST00000628124 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
GABRB3-216ENST00000628124 C10orf142B7Z368 130 aa5.87□□□□□ -1.47
GABRB3-216ENST00000628124 A0A087WTM6 91 aa5.87□□□□□ -1.47
GABRB3-216ENST00000628124 Q6ZSA8 131 aa5.86□□□□□ -1.47
GABRB3-216ENST00000628124 PRR34Q9NV39 138 aa5.86□□□□□ -1.47
GABRB3-216ENST00000628124 H7BZZ5 65 aa5.86□□□□□ -1.47
GABRB3-216ENST00000628124 CEP192Q8TEP8 1941 aa5.85□□□□□ -1.47
GABRB3-216ENST00000628124 SPRR4Q96PI1 79 aa5.84□□□□□ -1.47
GABRB3-216ENST00000628124 Q8N1X5 172 aa5.84□□□□□ -1.47
GABRB3-216ENST00000628124 IGF2RP11717 2491 aa5.83□□□□□ -1.48
GABRB3-216ENST00000628124 COL4A4P53420 1690 aaPredicted RBP5.83□□□□□ -1.48
GABRB3-216ENST00000628124 LRP4O75096 1905 aa5.83□□□□□ -1.48
GABRB3-216ENST00000628124 HRES1P13985 223 aa5.83□□□□□ -1.48
GABRB3-216ENST00000628124 KLK9Q2XQG4 91 aa5.83□□□□□ -1.48
GABRB3-216ENST00000628124 A0A1B0GU33 70 aa5.82□□□□□ -1.48
GABRB3-216ENST00000628124 COL5A1P20908 1838 aaPredicted RBP5.8□□□□□ -1.48
GABRB3-216ENST00000628124 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
GABRB3-216ENST00000628124 PSORS1C2Q9UIG4 136 aa5.8□□□□□ -1.48
GABRB3-216ENST00000628124 PIEZO2Q9H5I5 2752 aa5.8□□□□□ -1.48
GABRB3-216ENST00000628124 PKD1L2Q7Z442 2459 aa5.8□□□□□ -1.48
GABRB3-216ENST00000628124 M0R2T5 61 aa5.79□□□□□ -1.48
GABRB3-216ENST00000628124 CNBPP62633 177 aaKnown RBP5.79□□□□□ -1.48
GABRB3-216ENST00000628124 C19orf73Q9NVV2 129 aa5.79□□□□□ -1.48
GABRB3-216ENST00000628124 MUC22E2RYF6 1773 aaPredicted RBP5.79□□□□□ -1.48
GABRB3-216ENST00000628124 USP9XQ93008 2570 aaPredicted RBP5.79□□□□□ -1.48
GABRB3-216ENST00000628124 ACANP16112 2415 aa5.78□□□□□ -1.48
GABRB3-216ENST00000628124 K7EIL1 84 aa5.78□□□□□ -1.48
GABRB3-216ENST00000628124 DMAC1Q96GE9 116 aa5.77□□□□□ -1.49
GABRB3-216ENST00000628124 CSAG1Q6PB30 78 aa5.76□□□□□ -1.49
GABRB3-216ENST00000628124 A0A1W2PNM2 257 aa5.76□□□□□ -1.49
GABRB3-216ENST00000628124 IGLV7-46A0A075B6I9 117 aa5.76□□□□□ -1.49
GABRB3-216ENST00000628124 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
GABRB3-216ENST00000628124 ANAPC11Q9NYG5 84 aa5.75□□□□□ -1.49
GABRB3-216ENST00000628124 CPAMD8Q8IZJ3 1885 aa5.75□□□□□ -1.49
GABRB3-216ENST00000628124 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
GABRB3-216ENST00000628124 PTPRBP23467 1997 aa5.74□□□□□ -1.49
GABRB3-216ENST00000628124 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
GABRB3-216ENST00000628124 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
GABRB3-216ENST00000628124 Q75L30 129 aa5.72□□□□□ -1.49
GABRB3-216ENST00000628124 KRTAP10-11P60412 298 aa5.71□□□□□ -1.5
GABRB3-216ENST00000628124 FAM229BQ4G0N7 80 aa5.7□□□□□ -1.5
GABRB3-216ENST00000628124 S4R3F8 94 aa5.69□□□□□ -1.5
GABRB3-216ENST00000628124 SETD2Q9BYW2 2564 aaPredicted RBP5.68□□□□□ -1.5
GABRB3-216ENST00000628124 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
GABRB3-216ENST00000628124 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
GABRB3-216ENST00000628124 CHD8Q9HCK8 2581 aa5.68□□□□□ -1.5
GABRB3-216ENST00000628124 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
GABRB3-216ENST00000628124 SPINK7P58062 85 aa5.67□□□□□ -1.5
GABRB3-216ENST00000628124 TNP2Q05952 138 aa5.67□□□□□ -1.5
GABRB3-216ENST00000628124 ZCCHC13Q8WW36 166 aaKnown RBP5.66□□□□□ -1.5
GABRB3-216ENST00000628124 R4GN34 69 aa5.66□□□□□ -1.5
GABRB3-216ENST00000628124 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.66□□□□□ -1.5
GABRB3-216ENST00000628124 WIPF1O43516 503 aa5.65□□□□□ -1.5
GABRB3-216ENST00000628124 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.5
GABRB3-216ENST00000628124 USP9YO00507 2555 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-216ENST00000628124 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
GABRB3-216ENST00000628124 COL27A1Q8IZC6 1860 aaPredicted RBP5.63□□□□□ -1.51
GABRB3-216ENST00000628124 H3BS24 57 aa5.62□□□□□ -1.51
GABRB3-216ENST00000628124 MTORP42345 2549 aa5.6□□□□□ -1.51
GABRB3-216ENST00000628124 CASC10Q5T4H9 136 aa5.6□□□□□ -1.51
GABRB3-216ENST00000628124 COL4A2P08572 1712 aa5.6□□□□□ -1.51
GABRB3-216ENST00000628124 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.52
GABRB3-216ENST00000628124 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
GABRB3-216ENST00000628124 PLAC4Q8WY50 150 aa5.58□□□□□ -1.52
GABRB3-216ENST00000628124 ROMO1P60602 79 aa5.57□□□□□ -1.52
GABRB3-216ENST00000628124 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
GABRB3-216ENST00000628124 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
GABRB3-216ENST00000628124 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
GABRB3-216ENST00000628124 KRTAP10-3P60369 221 aa5.53□□□□□ -1.52
GABRB3-216ENST00000628124 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
GABRB3-216ENST00000628124 Q5W150 140 aa5.53□□□□□ -1.52
GABRB3-216ENST00000628124 A0A096LNT2 108 aa5.51□□□□□ -1.53
GABRB3-216ENST00000628124 FLG2Q5D862 2391 aaPredicted RBP5.51□□□□□ -1.53
GABRB3-216ENST00000628124 M0QZ58 72 aa5.5□□□□□ -1.53
GABRB3-216ENST00000628124 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
GABRB3-216ENST00000628124 ANKRD11Q6UB99 2663 aaPredicted RBP5.49□□□□□ -1.53
GABRB3-216ENST00000628124 Q5VV11 94 aa5.49□□□□□ -1.53
GABRB3-216ENST00000628124 SPRR1BP22528 89 aa5.48□□□□□ -1.53
GABRB3-216ENST00000628124 FASNP49327 2511 aaKnown RBP5.48□□□□□ -1.53
GABRB3-216ENST00000628124 ANKRD17O75179 2603 aaKnown RBP5.48□□□□□ -1.53
GABRB3-216ENST00000628124 CR1P17927 2039 aa5.47□□□□□ -1.53
GABRB3-216ENST00000628124 SPTBN4Q9H254 2564 aa5.47□□□□□ -1.53
GABRB3-216ENST00000628124 POLQO75417 2590 aa5.47□□□□□ -1.53
GABRB3-216ENST00000628124 SPRR1AP35321 89 aa5.46□□□□□ -1.54
GABRB3-216ENST00000628124 LINC00472Q9H8W2 130 aa5.45□□□□□ -1.54
GABRB3-216ENST00000628124 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
GABRB3-216ENST00000628124 Q5XG85 94 aa5.43□□□□□ -1.54
GABRB3-216ENST00000628124 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
GABRB3-216ENST00000628124 CEP295Q9C0D2 2601 aa5.42□□□□□ -1.54
GABRB3-216ENST00000628124 OXTP01178 125 aa5.41□□□□□ -1.54
GABRB3-216ENST00000628124 Q5VSD8 79 aa5.39□□□□□ -1.55
GABRB3-216ENST00000628124 MGAM2Q2M2H8 2515 aa5.38□□□□□ -1.55
GABRB3-216ENST00000628124 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
GABRB3-216ENST00000628124 USP24Q9UPU5 2620 aa5.37□□□□□ -1.55
GABRB3-216ENST00000628124 PCSK5Q92824 1860 aa5.35□□□□□ -1.55
GABRB3-216ENST00000628124 PANO1I0J062 215 aa5.34□□□□□ -1.55
GABRB3-216ENST00000628124 KRTAP1-1Q07627 177 aa5.33□□□□□ -1.56
GABRB3-216ENST00000628124 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
GABRB3-216ENST00000628124 KRTAP1-3Q8IUG1 177 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms