RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 RPL28P46779 137 aaKnown RBP8.98□□□□□ -0.97
PNKP-221ENST00000627317 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
PNKP-221ENST00000627317 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
PNKP-221ENST00000627317 CBY1Q9Y3M2 126 aa8.98□□□□□ -0.97
PNKP-221ENST00000627317 LINC00337Q8N6G1 96 aa8.97□□□□□ -0.97
PNKP-221ENST00000627317 DIRC1Q969H9 104 aa8.97□□□□□ -0.97
PNKP-221ENST00000627317 UQCR10Q9UDW1 63 aa8.97□□□□□ -0.97
PNKP-221ENST00000627317 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
PNKP-221ENST00000627317 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
PNKP-221ENST00000627317 A4D1N5 150 aa8.96□□□□□ -0.98
PNKP-221ENST00000627317 ZNF861PO60384 105 aa8.96□□□□□ -0.98
PNKP-221ENST00000627317 A6NDN8 102 aa8.95□□□□□ -0.98
PNKP-221ENST00000627317 PRLHP81277 87 aa8.95□□□□□ -0.98
PNKP-221ENST00000627317 TRAV13-2A0A0B4J235 113 aa8.94□□□□□ -0.98
PNKP-221ENST00000627317 SPRR1AP35321 89 aa8.94□□□□□ -0.98
PNKP-221ENST00000627317 TAL2Q16559 108 aa8.94□□□□□ -0.98
PNKP-221ENST00000627317 TNXBP22105 4242 aa8.94□□□□□ -0.98
PNKP-221ENST00000627317 H0Y9J4 135 aa8.93□□□□□ -0.98
PNKP-221ENST00000627317 ZNF73O43830 326 aaPredicted RBP8.92□□□□□ -0.98
PNKP-221ENST00000627317 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
PNKP-221ENST00000627317 C12orf57Q99622 126 aa8.92□□□□□ -0.98
PNKP-221ENST00000627317 PRO1933Q9H354 126 aa8.92□□□□□ -0.98
PNKP-221ENST00000627317 HSD52Q0P140 79 aa8.91□□□□□ -0.98
PNKP-221ENST00000627317 CEND1Q8N111 149 aa8.91□□□□□ -0.98
PNKP-221ENST00000627317 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.98
PNKP-221ENST00000627317 A6NJY4 79 aa8.9□□□□□ -0.98
PNKP-221ENST00000627317 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.98
PNKP-221ENST00000627317 HINT1P49773 126 aaPredicted RBP8.9□□□□□ -0.98
PNKP-221ENST00000627317 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
PNKP-221ENST00000627317 B5MCH6 92 aa8.88□□□□□ -0.99
PNKP-221ENST00000627317 RPL13AP40429 203 aaKnown RBP8.88□□□□□ -0.99
PNKP-221ENST00000627317 Q6ZRX8 168 aa8.88□□□□□ -0.99
PNKP-221ENST00000627317 LINC01600Q96MT4 127 aa8.88□□□□□ -0.99
PNKP-221ENST00000627317 C6orf99Q4VX62 202 aa8.87□□□□□ -0.99
PNKP-221ENST00000627317 RAB37Q96AX2 223 aa8.87□□□□□ -0.99
PNKP-221ENST00000627317 TSTD3H0UI37 97 aa8.86□□□□□ -0.99
PNKP-221ENST00000627317 FXYD2P54710 66 aa8.86□□□□□ -0.99
PNKP-221ENST00000627317 A0A0B4J2C4 111 aa8.85□□□□□ -0.99
PNKP-221ENST00000627317 CFC1BP0CG36 223 aa8.85□□□□□ -0.99
PNKP-221ENST00000627317 CFC1P0CG37 223 aa8.85□□□□□ -0.99
PNKP-221ENST00000627317 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
PNKP-221ENST00000627317 COX7BP24311 80 aa8.84□□□□□ -0.99
PNKP-221ENST00000627317 SMCR5Q8TEV8 140 aa8.83□□□□□ -1
PNKP-221ENST00000627317 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
PNKP-221ENST00000627317 A0A1B0GWB2 263 aa8.82□□□□□ -1
PNKP-221ENST00000627317 H7C2G1 150 aa8.82□□□□□ -1
PNKP-221ENST00000627317 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
PNKP-221ENST00000627317 Q9BRP9 147 aa8.82□□□□□ -1
PNKP-221ENST00000627317 NHP2Q9NX24 153 aaKnown RBP8.82□□□□□ -1
PNKP-221ENST00000627317 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
PNKP-221ENST00000627317 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
PNKP-221ENST00000627317 KRTAP10-8P60410 259 aa8.81□□□□□ -1
PNKP-221ENST00000627317 DHRS4-AS1Q9P1J3 65 aa8.81□□□□□ -1
PNKP-221ENST00000627317 VAMP3Q15836 100 aa8.8□□□□□ -1
PNKP-221ENST00000627317 Q1RN00 199 aa8.8□□□□□ -1
PNKP-221ENST00000627317 PRO1854Q9UHT4 67 aa8.8□□□□□ -1
PNKP-221ENST00000627317 UBR4Q5T4S7 5183 aa8.8□□□□□ -1
PNKP-221ENST00000627317 ERC2-IT1O76042 136 aa8.79□□□□□ -1
PNKP-221ENST00000627317 CTAG1AP78358 180 aa8.79□□□□□ -1
PNKP-221ENST00000627317 M0R143 59 aa8.78□□□□□ -1
PNKP-221ENST00000627317 BVES-AS1Q5T3Y7 98 aa8.78□□□□□ -1
PNKP-221ENST00000627317 SPRR4Q96PI1 79 aa8.78□□□□□ -1
PNKP-221ENST00000627317 K7ERJ3 54 aa8.77□□□□□ -1.01
PNKP-221ENST00000627317 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
PNKP-221ENST00000627317 FAM229BQ4G0N7 80 aa8.76□□□□□ -1.01
PNKP-221ENST00000627317 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
PNKP-221ENST00000627317 CRYGAP11844 174 aa8.75□□□□□ -1.01
PNKP-221ENST00000627317 SLC25A20O43772 301 aa8.74□□□□□ -1.01
PNKP-221ENST00000627317 GAGE2AQ6NT46 116 aa8.74□□□□□ -1.01
PNKP-221ENST00000627317 A0A087X002 238 aa8.73□□□□□ -1.01
PNKP-221ENST00000627317 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
PNKP-221ENST00000627317 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
PNKP-221ENST00000627317 LINC00575Q6W349 94 aa8.71□□□□□ -1.02
PNKP-221ENST00000627317 PSMB2P49721 201 aa8.7□□□□□ -1.02
PNKP-221ENST00000627317 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
PNKP-221ENST00000627317 LRP2P98164 4655 aa8.7□□□□□ -1.02
PNKP-221ENST00000627317 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
PNKP-221ENST00000627317 H0YGX0 51 aa8.69□□□□□ -1.02
PNKP-221ENST00000627317 TRIAP1O43715 76 aa8.69□□□□□ -1.02
PNKP-221ENST00000627317 TSPAN13O95857 204 aa8.69□□□□□ -1.02
PNKP-221ENST00000627317 BATFQ16520 125 aa8.68□□□□□ -1.02
PNKP-221ENST00000627317 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
PNKP-221ENST00000627317 DEFB105AQ8NG35 78 aa8.68□□□□□ -1.02
PNKP-221ENST00000627317 SNCGO76070 127 aa8.67□□□□□ -1.02
PNKP-221ENST00000627317 C3orf22Q8N5N4 141 aa8.67□□□□□ -1.02
PNKP-221ENST00000627317 COX6CP09669 75 aa8.66□□□□□ -1.02
PNKP-221ENST00000627317 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.02
PNKP-221ENST00000627317 SPRR1BP22528 89 aa8.65□□□□□ -1.02
PNKP-221ENST00000627317 Q6ZQY7 126 aa8.65□□□□□ -1.02
PNKP-221ENST00000627317 IGLV9-49A0A0B4J1Y8 123 aa8.64□□□□□ -1.03
PNKP-221ENST00000627317 IGLV5-48A0A075B6I7 105 aa8.63□□□□□ -1.03
PNKP-221ENST00000627317 MOBPQ13875 183 aa8.63□□□□□ -1.03
PNKP-221ENST00000627317 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
PNKP-221ENST00000627317 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.63□□□□□ -1.03
PNKP-221ENST00000627317 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
PNKP-221ENST00000627317 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
PNKP-221ENST00000627317 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
PNKP-221ENST00000627317 A0A1B0GX51 115 aa8.61□□□□□ -1.03
PNKP-221ENST00000627317 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
PNKP-221ENST00000627317 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms